RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 PDXDC1Q6P996 788 aa19.46■□□□□ 0.71
SHANK1-202ENST00000359082 PATL1Q86TB9 770 aaKnown RBP19.46■□□□□ 0.71
SHANK1-202ENST00000359082 RNF146Q9NTX7 359 aa19.46■□□□□ 0.71
SHANK1-202ENST00000359082 KRT7P08729 469 aa19.45■□□□□ 0.7
SHANK1-202ENST00000359082 KRT17Q04695 432 aa19.45■□□□□ 0.7
SHANK1-202ENST00000359082 ACTN3Q08043 901 aaPredicted RBP19.45■□□□□ 0.7
SHANK1-202ENST00000359082 TERF2Q15554 542 aa19.45■□□□□ 0.7
SHANK1-202ENST00000359082 UNC45AQ9H3U1 944 aa19.45■□□□□ 0.7
SHANK1-202ENST00000359082 CLCA2Q9UQC9 943 aa19.45■□□□□ 0.7
SHANK1-202ENST00000359082 MMP10P09238 476 aa19.45■□□□□ 0.7
SHANK1-202ENST00000359082 CHRNA3P32297 505 aa19.45■□□□□ 0.7
SHANK1-202ENST00000359082 BCAR1P56945 870 aa19.45■□□□□ 0.7
SHANK1-202ENST00000359082 TADA2BQ86TJ2 420 aa19.45■□□□□ 0.7
SHANK1-202ENST00000359082 AURKCQ9UQB9 309 aa19.45■□□□□ 0.7
SHANK1-202ENST00000359082 MYO1CO00159 1063 aa19.45■□□□□ 0.7
SHANK1-202ENST00000359082 CYP2E1P05181 493 aaPredicted RBP19.45■□□□□ 0.7
SHANK1-202ENST00000359082 BTBD8Q5XKL5 378 aa19.45■□□□□ 0.7
SHANK1-202ENST00000359082 NDE1Q9NXR1 346 aa19.45■□□□□ 0.7
SHANK1-202ENST00000359082 ZNF579Q8NAF0 562 aaKnown RBP19.45■□□□□ 0.7
SHANK1-202ENST00000359082 MXD3Q9BW11 206 aa19.45■□□□□ 0.7
SHANK1-202ENST00000359082 ZCWPW1Q9H0M4 648 aa19.45■□□□□ 0.7
SHANK1-202ENST00000359082 P4HBP07237 508 aaKnown RBP19.45■□□□□ 0.7
SHANK1-202ENST00000359082 ARSEP51690 589 aa19.45■□□□□ 0.7
SHANK1-202ENST00000359082 KRT72Q14CN4 511 aa19.45■□□□□ 0.7
SHANK1-202ENST00000359082 RBAKQ9NYW8 714 aaPredicted RBP19.45■□□□□ 0.7
SHANK1-202ENST00000359082 LMBRD2Q68DH5 695 aaPredicted RBP19.45■□□□□ 0.7
SHANK1-202ENST00000359082 LY9Q9HBG7 655 aa19.45■□□□□ 0.7
SHANK1-202ENST00000359082 FBXO40Q9UH90 709 aa19.45■□□□□ 0.7
SHANK1-202ENST00000359082 STK36Q9NRP7 1315 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 hCG_2014768A0A024R1R8 64 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 TYK2P29597 1187 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 GRIK1P39086 918 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 QARSP47897 775 aaKnown RBP19.44■□□□□ 0.7
SHANK1-202ENST00000359082 HDAC4P56524 1084 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 GRM4Q14833 912 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 RHOT1Q8IXI2 618 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 ARHGEF1Q92888 912 aaKnown RBP19.44■□□□□ 0.7
SHANK1-202ENST00000359082 PRMT1Q99873 361 aaKnown RBP19.44■□□□□ 0.7
SHANK1-202ENST00000359082 PARVAQ9NVD7 372 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 CDH6P55285 790 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 ZNF235Q14590 738 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 PPP1R18Q6NYC8 613 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 EIF2AK1Q9BQI3 630 aaKnown RBP19.44■□□□□ 0.7
SHANK1-202ENST00000359082 OSBPL1AQ9BXW6 950 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 SLC24A3Q9HC58 644 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 TRPC7Q9HCX4 862 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 AIPL1Q9NZN9 384 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 PPHLN1Q8NEY8 458 aaKnown RBP19.44■□□□□ 0.7
SHANK1-202ENST00000359082 RUBCNLQ9H714 662 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 USP6P35125 1406 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 TARBP1Q13395 1621 aaKnown RBP19.44■□□□□ 0.7
SHANK1-202ENST00000359082 SERPIND1P05546 499 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 RAD23BP54727 409 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 ICE2Q659A1 982 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 RRM2BQ7LG56 351 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 DHX40Q8IX18 779 aaKnown RBP19.44■□□□□ 0.7
SHANK1-202ENST00000359082 ENAHQ8N8S7 591 aaPredicted RBP19.44■□□□□ 0.7
SHANK1-202ENST00000359082 YIPF2Q9BWQ6 316 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 EPC1Q9H2F5 836 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 TAF1DQ9H5J8 278 aaPredicted RBP19.44■□□□□ 0.7
SHANK1-202ENST00000359082 STOML1Q9UBI4 398 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 TRIM49P0CI25 452 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 TRIM49CP0CI26 452 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 SFNP31947 248 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 DDX53Q86TM3 631 aaKnown RBP19.44■□□□□ 0.7
SHANK1-202ENST00000359082 TRIM54Q9BYV2 358 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 DYRK4Q9NR20 520 aa19.44■□□□□ 0.7
SHANK1-202ENST00000359082 MEFVO15553 781 aaPredicted RBP19.43■□□□□ 0.7
SHANK1-202ENST00000359082 SARM1Q6SZW1 724 aa19.43■□□□□ 0.7
SHANK1-202ENST00000359082 ANO5Q75V66 913 aa19.43■□□□□ 0.7
SHANK1-202ENST00000359082 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.43■□□□□ 0.7
SHANK1-202ENST00000359082 EMSYQ7Z589 1322 aa19.43■□□□□ 0.7
SHANK1-202ENST00000359082 UTYO14607 1347 aa19.43■□□□□ 0.7
SHANK1-202ENST00000359082 ATP11CQ8NB49 1132 aa19.43■□□□□ 0.7
SHANK1-202ENST00000359082 PGBD4Q96DM1 585 aa19.43■□□□□ 0.7
SHANK1-202ENST00000359082 CLMNQ96JQ2 1002 aa19.43■□□□□ 0.7
SHANK1-202ENST00000359082 PIM2Q9P1W9 311 aa19.43■□□□□ 0.7
SHANK1-202ENST00000359082 MRFAP1Q9Y605 127 aa19.43■□□□□ 0.7
SHANK1-202ENST00000359082 PMS1P54277 932 aaKnown RBP19.43■□□□□ 0.7
SHANK1-202ENST00000359082 UBE3AQ05086 875 aa19.43■□□□□ 0.7
SHANK1-202ENST00000359082 PARP9Q8IXQ6 854 aa19.43■□□□□ 0.7
SHANK1-202ENST00000359082 SENP1Q9P0U3 644 aa19.43■□□□□ 0.7
SHANK1-202ENST00000359082 MAD2L2Q9UI95 211 aa19.43■□□□□ 0.7
SHANK1-202ENST00000359082 ADAM21Q9UKJ8 722 aa19.43■□□□□ 0.7
SHANK1-202ENST00000359082 SPDYE5A6NIY4 337 aa19.43■□□□□ 0.7
SHANK1-202ENST00000359082 KRT4P19013 534 aa19.43■□□□□ 0.7
SHANK1-202ENST00000359082 SPDYE7PQ495Y7 208 aa19.43■□□□□ 0.7
SHANK1-202ENST00000359082 FAM20AQ96MK3 541 aa19.43■□□□□ 0.7
SHANK1-202ENST00000359082 ATP1A1P05023 1023 aaKnown RBP19.43■□□□□ 0.7
SHANK1-202ENST00000359082 RALAP11233 206 aa19.43■□□□□ 0.7
SHANK1-202ENST00000359082 KDM4CQ9H3R0 1056 aa19.43■□□□□ 0.7
SHANK1-202ENST00000359082 ETNK1Q9HBU6 452 aa19.43■□□□□ 0.7
SHANK1-202ENST00000359082 GGT7Q9UJ14 662 aa19.43■□□□□ 0.7
SHANK1-202ENST00000359082 TTC37Q6PGP7 1564 aa19.42■□□□□ 0.7
SHANK1-202ENST00000359082 USP27XA6NNY8 438 aa19.42■□□□□ 0.7
SHANK1-202ENST00000359082 GOLGA8RI6L899 631 aa19.42■□□□□ 0.7
SHANK1-202ENST00000359082 KCNN4O15554 427 aa19.42■□□□□ 0.7
SHANK1-202ENST00000359082 EFCAB14O75071 495 aa19.42■□□□□ 0.7
SHANK1-202ENST00000359082 CDC27P30260 824 aa19.42■□□□□ 0.7
SHANK1-202ENST00000359082 ANKS3Q6ZW76 656 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms