RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 FRMD3A2A2Y4 597 aa12□□□□□ -0.49
SSU72-202ENST00000359060 OPLAHO14841 1288 aa12□□□□□ -0.49
SSU72-202ENST00000359060 LCA5LO95447 670 aa12□□□□□ -0.49
SSU72-202ENST00000359060 PGM5Q15124 567 aa12□□□□□ -0.49
SSU72-202ENST00000359060 PCNX4Q63HM2 1172 aa12□□□□□ -0.49
SSU72-202ENST00000359060 PHLDB3Q6NSJ2 640 aa12□□□□□ -0.49
SSU72-202ENST00000359060 FOXR1Q6PIV2 292 aa12□□□□□ -0.49
SSU72-202ENST00000359060 CCDC137Q6PK04 289 aaKnown RBP12□□□□□ -0.49
SSU72-202ENST00000359060 ZBTB8OSQ8IWT0 167 aa12□□□□□ -0.49
SSU72-202ENST00000359060 SULF1Q8IWU6 871 aa12□□□□□ -0.49
SSU72-202ENST00000359060 GADD45GIP1Q8TAE8 222 aaPredicted RBP12□□□□□ -0.49
SSU72-202ENST00000359060 TAS1R2Q8TE23 839 aa12□□□□□ -0.49
SSU72-202ENST00000359060 CPA5Q8WXQ8 436 aa12□□□□□ -0.49
SSU72-202ENST00000359060 RUBCNQ92622 972 aa12□□□□□ -0.49
SSU72-202ENST00000359060 FAM84AQ96KN4 292 aa12□□□□□ -0.49
SSU72-202ENST00000359060 ISCUQ9H1K1 167 aa12□□□□□ -0.49
SSU72-202ENST00000359060 HOXC10Q9NYD6 342 aa12□□□□□ -0.49
SSU72-202ENST00000359060 WRAP73Q9P2S5 460 aaPredicted RBP12□□□□□ -0.49
SSU72-202ENST00000359060 DGAT1O75907 488 aa12□□□□□ -0.49
SSU72-202ENST00000359060 HSPA6P17066 643 aa12□□□□□ -0.49
SSU72-202ENST00000359060 PRKCIP41743 596 aa12□□□□□ -0.49
SSU72-202ENST00000359060 ERVK-9P63128 1117 aa12□□□□□ -0.49
SSU72-202ENST00000359060 ASTE1Q2TB18 679 aaPredicted RBP12□□□□□ -0.49
SSU72-202ENST00000359060 LRRC31Q6UY01 552 aa12□□□□□ -0.49
SSU72-202ENST00000359060 THNSL1Q8IYQ7 743 aa12□□□□□ -0.49
SSU72-202ENST00000359060 LNX1Q8TBB1 728 aaPredicted RBP12□□□□□ -0.49
SSU72-202ENST00000359060 PPM1EQ8WY54 764 aa12□□□□□ -0.49
SSU72-202ENST00000359060 ZNF302Q9NR11 478 aa12□□□□□ -0.49
SSU72-202ENST00000359060 ADAM22Q9P0K1 906 aa12□□□□□ -0.49
SSU72-202ENST00000359060 AGO2Q9UKV8 859 aaKnown RBP12□□□□□ -0.49
SSU72-202ENST00000359060 INTUQ9ULD6 942 aa12□□□□□ -0.49
SSU72-202ENST00000359060 GOLGA8SH3BPF8 625 aa12□□□□□ -0.49
SSU72-202ENST00000359060 ACSL3O95573 720 aa12□□□□□ -0.49
SSU72-202ENST00000359060 MMEP08473 750 aa12□□□□□ -0.49
SSU72-202ENST00000359060 MUTP22033 750 aa12□□□□□ -0.49
SSU72-202ENST00000359060 ITGB3BPQ13352 177 aaPredicted RBP12□□□□□ -0.49
SSU72-202ENST00000359060 BMT2Q1RMZ1 405 aa12□□□□□ -0.49
SSU72-202ENST00000359060 SEZ6Q53EL9 994 aa12□□□□□ -0.49
SSU72-202ENST00000359060 SLC47A2Q86VL8 602 aa12□□□□□ -0.49
SSU72-202ENST00000359060 CALR3Q96L12 384 aaKnown RBP12□□□□□ -0.49
SSU72-202ENST00000359060 PXMP2Q9NR77 195 aa12□□□□□ -0.49
SSU72-202ENST00000359060 COL20A1Q9P218 1284 aa12□□□□□ -0.49
SSU72-202ENST00000359060 AJAP1Q9UKB5 411 aaPredicted RBP12□□□□□ -0.49
SSU72-202ENST00000359060 ZNF148Q9UQR1 794 aa12□□□□□ -0.49
SSU72-202ENST00000359060 EPM2AIP1Q7L775 607 aaPredicted RBP12□□□□□ -0.49
SSU72-202ENST00000359060 NLRP4Q96MN2 994 aa12□□□□□ -0.49
SSU72-202ENST00000359060 INPP4AQ96PE3 977 aaPredicted RBP12□□□□□ -0.49
SSU72-202ENST00000359060 TMEM117Q9H0C3 514 aa12□□□□□ -0.49
SSU72-202ENST00000359060 SAMD15Q9P1V8 674 aa12□□□□□ -0.49
SSU72-202ENST00000359060 FEZ2Q9UHY8 353 aaPredicted RBP12□□□□□ -0.49
SSU72-202ENST00000359060 HOXD13P35453 343 aa11.99□□□□□ -0.49
SSU72-202ENST00000359060 SCN7AQ01118 1682 aa11.99□□□□□ -0.49
SSU72-202ENST00000359060 NT5DC3Q86UY8 548 aa11.99□□□□□ -0.49
SSU72-202ENST00000359060 ANKS4BQ8N8V4 417 aa11.99□□□□□ -0.49
SSU72-202ENST00000359060 KIAA1683Q9H0B3 1180 aa11.99□□□□□ -0.49
SSU72-202ENST00000359060 TNRC6CQ9HCJ0 1690 aaKnown RBP11.99□□□□□ -0.49
SSU72-202ENST00000359060 ANKEF1Q9NU02 776 aa11.99□□□□□ -0.49
SSU72-202ENST00000359060 RBAKQ9NYW8 714 aaPredicted RBP11.99□□□□□ -0.49
SSU72-202ENST00000359060 DIS3Q9Y2L1 958 aaKnown RBP11.99□□□□□ -0.49
SSU72-202ENST00000359060 CAPN7Q9Y6W3 813 aa11.99□□□□□ -0.49
SSU72-202ENST00000359060 COL22A1Q8NFW1 1626 aaPredicted RBP11.99□□□□□ -0.49
SSU72-202ENST00000359060 RBAK-RBAKDNI3L0D1 243 aa11.99□□□□□ -0.49
SSU72-202ENST00000359060 CLDN3O15551 220 aa11.99□□□□□ -0.49
SSU72-202ENST00000359060 ATF2P15336 505 aa11.99□□□□□ -0.49
SSU72-202ENST00000359060 SCP2P22307 547 aa11.99□□□□□ -0.49
SSU72-202ENST00000359060 HSD17B3P37058 310 aa11.99□□□□□ -0.49
SSU72-202ENST00000359060 FAM160B1Q5W0V3 765 aa11.99□□□□□ -0.49
SSU72-202ENST00000359060 GGA3Q9NZ52 723 aa11.99□□□□□ -0.49
SSU72-202ENST00000359060 PFASO15067 1338 aa11.99□□□□□ -0.49
SSU72-202ENST00000359060 BACE1P56817 501 aa11.99□□□□□ -0.49
SSU72-202ENST00000359060 UGCGQ16739 394 aa11.99□□□□□ -0.49
SSU72-202ENST00000359060 CYP4F22Q6NT55 531 aa11.99□□□□□ -0.49
SSU72-202ENST00000359060 ACTRT1Q8TDG2 376 aa11.99□□□□□ -0.49
SSU72-202ENST00000359060 MAIP1Q8WWC4 291 aa11.99□□□□□ -0.49
SSU72-202ENST00000359060 PSMD1Q99460 953 aa11.99□□□□□ -0.49
SSU72-202ENST00000359060 FAM53CQ9NYF3 392 aa11.99□□□□□ -0.49
SSU72-202ENST00000359060 CLEC11AQ9Y240 323 aa11.99□□□□□ -0.49
SSU72-202ENST00000359060 ANKRD63C9JTQ0 380 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 CALCAP01258 141 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 FDX1P10109 184 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 AARSP49588 968 aaKnown RBP eCLIP11.98□□□□□ -0.49
SSU72-202ENST00000359060 SEC24CP53992 1094 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 ACTR2P61160 394 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 LACTBP83111 547 aaPredicted RBP11.98□□□□□ -0.49
SSU72-202ENST00000359060 C4orf19Q8IY42 314 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 TARS2Q9BW92 718 aaKnown RBP11.98□□□□□ -0.49
SSU72-202ENST00000359060 CARD9Q9H257 536 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 SLC38A10Q9HBR0 1119 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 TMEM8AQ9HCN3 771 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 FAM169AQ9Y6X4 670 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 ATP2A1O14983 1001 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 XKR3Q5GH77 459 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 FKBP1CQ5VVH2 108 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 AADACL2Q6P093 401 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 SRLQ86TD4 932 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 JAMLQ86YT9 394 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 RNF25Q96BH1 459 aaPredicted RBP11.98□□□□□ -0.49
SSU72-202ENST00000359060 FAM118BQ9BPY3 351 aa11.98□□□□□ -0.49
SSU72-202ENST00000359060 NSRP1Q9H0G5 558 aaKnown RBP11.98□□□□□ -0.49
SSU72-202ENST00000359060 TBK1Q9UHD2 729 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms