RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 ZNF589Q86UQ0 364 aaPredicted RBP10.33□□□□□ -0.76
CHD3-202ENST00000358181 PLD3Q8IV08 490 aa10.33□□□□□ -0.76
CHD3-202ENST00000358181 IQCF2Q8IXL9 164 aa10.33□□□□□ -0.76
CHD3-202ENST00000358181 HEMGNQ9BXL5 484 aa10.33□□□□□ -0.76
CHD3-202ENST00000358181 AP1M1Q9BXS5 423 aa10.33□□□□□ -0.76
CHD3-202ENST00000358181 MAGEB5Q9BZ81 275 aa10.33□□□□□ -0.76
CHD3-202ENST00000358181 POLD4Q9HCU8 107 aa10.33□□□□□ -0.76
CHD3-202ENST00000358181 PCSK1NQ9UHG2 260 aa10.33□□□□□ -0.76
CHD3-202ENST00000358181 SOX13Q9UN79 622 aa10.33□□□□□ -0.76
CHD3-202ENST00000358181 SCAF8Q9UPN6 1271 aaKnown RBP10.33□□□□□ -0.76
CHD3-202ENST00000358181 TARSL2A2RTX5 802 aaKnown RBP10.32□□□□□ -0.76
CHD3-202ENST00000358181 SASH1O94885 1247 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 AP3B2Q13367 1082 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 DDI2Q5TDH0 399 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 CIAPIN1Q6FI81 312 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 HORMAD1Q86X24 394 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 MYLK2Q9H1R3 596 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 SLC39A10Q9ULF5 831 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 ZNF335Q9H4Z2 1342 aaPredicted RBP10.32□□□□□ -0.76
CHD3-202ENST00000358181 ARHGEF10O15013 1369 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 UGGT1Q9NYU2 1555 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 ACSL3O95573 720 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 NR2F2P24468 414 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 EIF2B5Q13144 721 aaKnown RBP10.32□□□□□ -0.76
CHD3-202ENST00000358181 ARHGAP15Q53QZ3 475 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 SYDE2Q5VT97 1194 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 TRAF7Q6Q0C0 670 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.32□□□□□ -0.76
CHD3-202ENST00000358181 SLC25A41Q8N5S1 370 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 OR6J1Q8NGC5 347 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 OSGEPL1Q9H4B0 414 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 CD274Q9NZQ7 290 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 ZHX2Q9Y6X8 837 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 CCDC130P13994 396 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 PFKFB1P16118 471 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 SLFN12LQ6IEE8 588 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 CCDC84Q86UT8 332 aaPredicted RBP10.32□□□□□ -0.76
CHD3-202ENST00000358181 TRIM58Q8NG06 486 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 ARL3P36405 182 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 DDX39BQ13838 428 aaKnown RBP10.32□□□□□ -0.76
CHD3-202ENST00000358181 PPP2R5BQ15173 497 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 NUP160Q12769 1436 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.32□□□□□ -0.76
CHD3-202ENST00000358181 TBX3O15119 743 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 NLRP11P59045 1033 aaKnown RBP10.32□□□□□ -0.76
CHD3-202ENST00000358181 RPS6P62753 249 aaKnown RBP10.32□□□□□ -0.76
CHD3-202ENST00000358181 MAP3K10Q02779 954 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 ITGADQ13349 1161 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 ZNF699Q32M78 642 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 USP17L2Q6R6M4 530 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 ZNF512Q96ME7 567 aaPredicted RBP10.32□□□□□ -0.76
CHD3-202ENST00000358181 HSPBP1Q9NZL4 362 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 ANAPC2Q9UJX6 822 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 PIK3C2GO75747 1445 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 METP08581 1390 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 USP17L3A6NCW0 530 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 USP17L4A6NCW7 530 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 K7ERI5 159 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 RALBP11234 206 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 CHI3L1P36222 383 aaPredicted RBP10.32□□□□□ -0.76
CHD3-202ENST00000358181 LAYNQ6UX15 382 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 USP17L1Q7RTZ2 530 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 ZC3H18Q86VM9 953 aaKnown RBP10.32□□□□□ -0.76
CHD3-202ENST00000358181 PALB2Q86YC2 1186 aa10.32□□□□□ -0.76
CHD3-202ENST00000358181 CCDC60Q8IWA6 550 aaPredicted RBP10.32□□□□□ -0.76
CHD3-202ENST00000358181 MRPS26Q9BYN8 205 aaKnown RBP10.32□□□□□ -0.76
CHD3-202ENST00000358181 COPS7BQ9H9Q2 264 aaPredicted RBP10.32□□□□□ -0.76
CHD3-202ENST00000358181 FTCDO95954 541 aa10.31□□□□□ -0.76
CHD3-202ENST00000358181 ALOX15P16050 662 aaPredicted RBP10.31□□□□□ -0.76
CHD3-202ENST00000358181 DNAJC3Q13217 504 aa10.31□□□□□ -0.76
CHD3-202ENST00000358181 R3HCC1LQ7Z5L2 792 aaKnown RBP10.31□□□□□ -0.76
CHD3-202ENST00000358181 SPATA33Q96N06 139 aa10.31□□□□□ -0.76
CHD3-202ENST00000358181 ALKBH4Q9NXW9 302 aa10.31□□□□□ -0.76
CHD3-202ENST00000358181 TADA3O75528 432 aa10.31□□□□□ -0.76
CHD3-202ENST00000358181 ATP5JP18859 108 aa10.31□□□□□ -0.76
CHD3-202ENST00000358181 ZNF772Q68DY9 489 aaPredicted RBP10.31□□□□□ -0.76
CHD3-202ENST00000358181 CENPPQ6IPU0 288 aa10.31□□□□□ -0.76
CHD3-202ENST00000358181 SH3TC2Q8TF17 1288 aa10.31□□□□□ -0.76
CHD3-202ENST00000358181 SAYSD1Q9NPB0 183 aa10.31□□□□□ -0.76
CHD3-202ENST00000358181 LATS2Q9NRM7 1088 aa10.31□□□□□ -0.76
CHD3-202ENST00000358181 KDM5AP29375 1690 aaKnown RBP10.31□□□□□ -0.76
CHD3-202ENST00000358181 AP3D1O14617 1153 aa10.31□□□□□ -0.76
CHD3-202ENST00000358181 SEC31AO94979 1220 aaKnown RBP10.31□□□□□ -0.76
CHD3-202ENST00000358181 H2AFZP0C0S5 128 aa10.31□□□□□ -0.76
CHD3-202ENST00000358181 SULT1E1P49888 294 aa10.31□□□□□ -0.76
CHD3-202ENST00000358181 SCRN1Q12765 414 aa10.31□□□□□ -0.76
CHD3-202ENST00000358181 H2AFVQ71UI9 128 aa10.31□□□□□ -0.76
CHD3-202ENST00000358181 MLKLQ8NB16 471 aa10.31□□□□□ -0.76
CHD3-202ENST00000358181 ZNF274Q96GC6 653 aaPredicted RBP10.31□□□□□ -0.76
CHD3-202ENST00000358181 USP28Q96RU2 1077 aa10.31□□□□□ -0.76
CHD3-202ENST00000358181 WRNIP1Q96S55 665 aa10.31□□□□□ -0.76
CHD3-202ENST00000358181 TTC7AQ9ULT0 858 aaPredicted RBP10.31□□□□□ -0.76
CHD3-202ENST00000358181 UBE4BO95155 1302 aa10.31□□□□□ -0.76
CHD3-202ENST00000358181 PLIN5Q00G26 463 aa10.31□□□□□ -0.76
CHD3-202ENST00000358181 RC3H1Q5TC82 1133 aaKnown RBP10.31□□□□□ -0.76
CHD3-202ENST00000358181 CCDC197Q8NCU1 140 aa10.31□□□□□ -0.76
CHD3-202ENST00000358181 XPO4Q9C0E2 1151 aaKnown RBP10.31□□□□□ -0.76
CHD3-202ENST00000358181 YY1AP1Q9H869 796 aa10.31□□□□□ -0.76
CHD3-202ENST00000358181 TUFT1Q9NNX1 390 aa10.31□□□□□ -0.76
CHD3-202ENST00000358181 FAM217BQ9NTX9 383 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms