RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 FTOQ9C0B1 505 aaKnown RBP eCLIP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 C1orf112Q9NSG2 853 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 KCNK4Q9NYG8 393 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 TMEM59LQ9UK28 342 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 VWDEQ8N2E2 1590 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 MAN1A2O60476 641 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 SNRPAP09012 282 aaKnown RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 CA8P35219 290 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 RPS8P62241 208 aaKnown RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 DRAP1Q14919 205 aaPredicted RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 DDHD1Q8NEL9 900 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 SAP30BPQ9UHR5 308 aaKnown RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 KRT81Q14533 505 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 RSPH3Q86UC2 560 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 KANSL2Q9H9L4 492 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 MYBL2P10244 700 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 KRT4P19013 534 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 IL10P22301 178 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 VAMP7P51809 220 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 NAB1Q13506 487 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 TBC1D10AQ9BXI6 508 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 RBM12Q9NTZ6 932 aaKnown RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 SMARCAL1Q9NZC9 954 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 VTI1BQ9UEU0 232 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 PPME1Q9Y570 386 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 ORC6Q9Y5N6 252 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 PNMA8CA0A1B0GUJ8 204 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 C2CD2LO14523 706 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 BAG2O95816 211 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 FTLP02792 175 aaPredicted RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 VIL1P09327 827 aaKnown RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 PPARGP37231 505 aaPredicted RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 STAT2P52630 851 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 ZNF844Q08AG5 666 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 ST3GAL1Q11201 340 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 ARCQ7LC44 396 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 DLGAP2Q9P1A6 1054 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 IPO11Q9UI26 975 aaKnown RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 ZNF701M0R085 212 aaPredicted RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 HAUS5O94927 633 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 EEF2P13639 858 aaKnown RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 ABCE1P61221 599 aaKnown RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 TXNRD1Q16881 649 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 TMEM154Q6P9G4 183 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 FAM9CQ8IZT9 166 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 ITPKCQ96DU7 683 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 DRG1Q9Y295 367 aaKnown RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 TNFAIP8O95379 198 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 SLC29A2Q14542 456 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 MTFR1Q15390 333 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 RASGEF1CQ8N431 466 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 TMC2Q8TDI7 906 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 SYBUQ9NX95 663 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 SH3GLB1Q9Y371 365 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 NLRP11P59045 1033 aaKnown RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 DCAF17Q5H9S7 520 aaPredicted RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 B3GNT6Q6ZMB0 384 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 RBM12BQ8IXT5 1001 aaKnown RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 ZWILCHQ9H900 591 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 NEK2P51955 445 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 BFSP1Q12934 665 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 RHOT1Q8IXI2 618 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 CKAP2Q8WWK9 683 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 RIOK1Q9BRS2 568 aaKnown RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 TRIM62Q9BVG3 475 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 ASCC2Q9H1I8 757 aaPredicted RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 ARHGEF9O43307 516 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 NR3C1P04150 777 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 PON1P27169 355 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 ATG9AQ7Z3C6 839 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 SLC9A9Q8IVB4 645 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 TRIM59Q8IWR1 403 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 RAD54LQ92698 747 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 OSBPL11Q9BXB4 747 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 AVENQ9NQS1 362 aaPredicted RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 HEG1Q9ULI3 1381 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 TRAFD1O14545 582 aaPredicted RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 ZBED4O75132 1171 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 TOB1P50616 345 aaPredicted RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 ARMT1Q9H993 441 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 VPS37BQ9H9H4 285 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 DMGDHQ9UI17 866 aaKnown RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 MAGEB2O15479 319 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 RPS6KA2Q15349 733 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 CNGA2Q16280 664 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 FAM47CQ5HY64 1035 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 CYTH2Q99418 400 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 GOLGA8CPA6NN73 597 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 DEAF1O75398 565 aaPredicted RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 SFNP31947 248 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 GYS2P54840 703 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 CYP27A1Q02318 531 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 PDAP1Q13442 181 aaKnown RBP4.36□□□□□ -1.71
SYNE2-204ENST00000358025 JAMLQ86YT9 394 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 TTLL11Q8NHH1 800 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 GORASP1Q9BQQ3 440 aa4.36□□□□□ -1.71
SYNE2-204ENST00000358025 GLI1P08151 1106 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms