RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 TMX4Q9H1E5 349 aaPredicted RBP19.01■□□□□ 0.63
RTN4-204ENST00000357732 NOCTQ9UK39 431 aaKnown RBP19.01■□□□□ 0.63
RTN4-204ENST00000357732 CHMP2AO43633 222 aa19■□□□□ 0.63
RTN4-204ENST00000357732 HIP1RO75146 1068 aa19■□□□□ 0.63
RTN4-204ENST00000357732 OAS1P00973 400 aaKnown RBP19■□□□□ 0.63
RTN4-204ENST00000357732 MESDQ14696 234 aa19■□□□□ 0.63
RTN4-204ENST00000357732 GPATCH11Q8N954 259 aa19■□□□□ 0.63
RTN4-204ENST00000357732 SLC17A8Q8NDX2 589 aa19■□□□□ 0.63
RTN4-204ENST00000357732 ZNF577Q9BSK1 485 aa19■□□□□ 0.63
RTN4-204ENST00000357732 TIPINQ9BVW5 301 aa19■□□□□ 0.63
RTN4-204ENST00000357732 A0A1B0GUA9 196 aa19■□□□□ 0.63
RTN4-204ENST00000357732 K7ENM7 598 aa19■□□□□ 0.63
RTN4-204ENST00000357732 O00370 1275 aa19■□□□□ 0.63
RTN4-204ENST00000357732 SNX3O60493 162 aa19■□□□□ 0.63
RTN4-204ENST00000357732 ENTPD3O75355 529 aa19■□□□□ 0.63
RTN4-204ENST00000357732 VIMP08670 466 aaKnown RBP19■□□□□ 0.63
RTN4-204ENST00000357732 PYGMP11217 842 aa19■□□□□ 0.63
RTN4-204ENST00000357732 ITIH2P19823 946 aa19■□□□□ 0.63
RTN4-204ENST00000357732 HMGB2P26583 209 aaKnown RBP19■□□□□ 0.63
RTN4-204ENST00000357732 ALDH1B1P30837 517 aa19■□□□□ 0.63
RTN4-204ENST00000357732 SIX1Q15475 284 aaPredicted RBP19■□□□□ 0.63
RTN4-204ENST00000357732 MIGA2Q7L4E1 593 aa19■□□□□ 0.63
RTN4-204ENST00000357732 KSR1Q8IVT5 923 aa19■□□□□ 0.63
RTN4-204ENST00000357732 XXYLT1Q8NBI6 393 aa19■□□□□ 0.63
RTN4-204ENST00000357732 ZNF564Q8TBZ8 553 aaPredicted RBP19■□□□□ 0.63
RTN4-204ENST00000357732 LXNQ9BS40 222 aa19■□□□□ 0.63
RTN4-204ENST00000357732 SPOPO43791 374 aa18.99■□□□□ 0.63
RTN4-204ENST00000357732 TCEA3O75764 348 aa18.99■□□□□ 0.63
RTN4-204ENST00000357732 ATP6V1G2O95670 118 aa18.99■□□□□ 0.63
RTN4-204ENST00000357732 ELF1P32519 619 aa18.99■□□□□ 0.63
RTN4-204ENST00000357732 MARCKSL1P49006 195 aa18.99■□□□□ 0.63
RTN4-204ENST00000357732 MKRN3Q13064 507 aaKnown RBP18.99■□□□□ 0.63
RTN4-204ENST00000357732 STRIP1Q5VSL9 837 aa18.99■□□□□ 0.63
RTN4-204ENST00000357732 ARHGEF19Q8IW93 802 aa18.99■□□□□ 0.63
RTN4-204ENST00000357732 ZDHHC14Q8IZN3 488 aa18.99■□□□□ 0.63
RTN4-204ENST00000357732 EPS8L3Q8TE67 593 aaKnown RBP18.99■□□□□ 0.63
RTN4-204ENST00000357732 UNC45AQ9H3U1 944 aa18.99■□□□□ 0.63
RTN4-204ENST00000357732 SERPINA10Q9UK55 444 aa18.99■□□□□ 0.63
RTN4-204ENST00000357732 DBR1Q9UK59 544 aaKnown RBP18.99■□□□□ 0.63
RTN4-204ENST00000357732 MRPL11Q9Y3B7 192 aaKnown RBP18.99■□□□□ 0.63
RTN4-204ENST00000357732 FSCN2O14926 492 aa18.99■□□□□ 0.63
RTN4-204ENST00000357732 KIF1CO43896 1103 aaKnown RBP18.99■□□□□ 0.63
RTN4-204ENST00000357732 MFAP3P55082 362 aa18.99■□□□□ 0.63
RTN4-204ENST00000357732 PPP1R7Q15435 360 aa18.99■□□□□ 0.63
RTN4-204ENST00000357732 SPICE1Q8N0Z3 855 aa18.99■□□□□ 0.63
RTN4-204ENST00000357732 DAW1Q8N136 415 aa18.99■□□□□ 0.63
RTN4-204ENST00000357732 CFBP00751 764 aa18.98■□□□□ 0.63
RTN4-204ENST00000357732 CHRNB2P17787 502 aa18.98■□□□□ 0.63
RTN4-204ENST00000357732 FGFR4P22455 802 aa18.98■□□□□ 0.63
RTN4-204ENST00000357732 MXI1P50539 228 aa18.98■□□□□ 0.63
RTN4-204ENST00000357732 PPP3CAQ08209 521 aa18.98■□□□□ 0.63
RTN4-204ENST00000357732 RASA3Q14644 834 aa18.98■□□□□ 0.63
RTN4-204ENST00000357732 HIBCHQ6NVY1 386 aaPredicted RBP18.98■□□□□ 0.63
RTN4-204ENST00000357732 AADACL2Q6P093 401 aa18.98■□□□□ 0.63
RTN4-204ENST00000357732 GRK7Q8WTQ7 553 aa18.98■□□□□ 0.63
RTN4-204ENST00000357732 SHC3Q92529 594 aa18.98■□□□□ 0.63
RTN4-204ENST00000357732 SCLT1Q96NL6 688 aa18.98■□□□□ 0.63
RTN4-204ENST00000357732 ELAC2Q9BQ52 826 aaKnown RBP18.98■□□□□ 0.63
RTN4-204ENST00000357732 DEFB129Q9H1M3 183 aa18.98■□□□□ 0.63
RTN4-204ENST00000357732 USP15Q9Y4E8 981 aaPredicted RBP18.98■□□□□ 0.63
RTN4-204ENST00000357732 PLA2G6O60733 806 aa18.98■□□□□ 0.63
RTN4-204ENST00000357732 SUN1O94901 812 aa18.98■□□□□ 0.63
RTN4-204ENST00000357732 GH2P01242 217 aa18.98■□□□□ 0.63
RTN4-204ENST00000357732 RARAP10276 462 aa18.98■□□□□ 0.63
RTN4-204ENST00000357732 DACT2Q5SW24 774 aa18.98■□□□□ 0.63
RTN4-204ENST00000357732 RNF207Q6ZRF8 634 aa18.98■□□□□ 0.63
RTN4-204ENST00000357732 EXOC3L1Q86VI1 746 aa18.98■□□□□ 0.63
RTN4-204ENST00000357732 NUP85Q9BW27 656 aa18.98■□□□□ 0.63
RTN4-204ENST00000357732 ARHGEF10LQ9HCE6 1279 aa18.98■□□□□ 0.63
RTN4-204ENST00000357732 WRAP73Q9P2S5 460 aaPredicted RBP18.98■□□□□ 0.63
RTN4-204ENST00000357732 A0A1W2PRG0 241 aa18.97■□□□□ 0.63
RTN4-204ENST00000357732 ZBTB39O15060 712 aa18.97■□□□□ 0.63
RTN4-204ENST00000357732 POTEJP0CG39 1038 aa18.97■□□□□ 0.63
RTN4-204ENST00000357732 ZNF268Q14587 947 aaPredicted RBP18.97■□□□□ 0.63
RTN4-204ENST00000357732 RRP1BQ14684 758 aaKnown RBP18.97■□□□□ 0.63
RTN4-204ENST00000357732 PADI6Q6TGC4 694 aa18.97■□□□□ 0.63
RTN4-204ENST00000357732 NOP9Q86U38 636 aaKnown RBP18.97■□□□□ 0.63
RTN4-204ENST00000357732 CEP57Q86XR8 500 aa18.97■□□□□ 0.63
RTN4-204ENST00000357732 FAM81BQ96LP2 452 aa18.97■□□□□ 0.63
RTN4-204ENST00000357732 PCDHB18PQ96TA0 734 aa18.97■□□□□ 0.63
RTN4-204ENST00000357732 RANBP17Q9H2T7 1088 aaKnown RBP18.97■□□□□ 0.63
RTN4-204ENST00000357732 NOD2Q9HC29 1040 aa18.97■□□□□ 0.63
RTN4-204ENST00000357732 LOC102724159A0A0B4J2E5 919 aa18.97■□□□□ 0.63
RTN4-204ENST00000357732 TMEM110-MUSTN1A8MSY1 372 aa18.97■□□□□ 0.63
RTN4-204ENST00000357732 PLS3P13797 630 aa18.97■□□□□ 0.63
RTN4-204ENST00000357732 DLG4P78352 724 aa18.97■□□□□ 0.63
RTN4-204ENST00000357732 PWP2Q15269 919 aaKnown RBP18.97■□□□□ 0.63
RTN4-204ENST00000357732 KCTD19Q17RG1 926 aaPredicted RBP18.97■□□□□ 0.63
RTN4-204ENST00000357732 RHBDF2Q6PJF5 856 aa18.97■□□□□ 0.63
RTN4-204ENST00000357732 RDH13Q8NBN7 331 aa18.97■□□□□ 0.63
RTN4-204ENST00000357732 CDC42EP4Q9H3Q1 356 aaKnown RBP18.97■□□□□ 0.63
RTN4-204ENST00000357732 HSPBP1Q9NZL4 362 aa18.97■□□□□ 0.63
RTN4-204ENST00000357732 SMIM23A6NLE4 172 aa18.96■□□□□ 0.63
RTN4-204ENST00000357732 IPO5O00410 1097 aaKnown RBP18.96■□□□□ 0.63
RTN4-204ENST00000357732 ATP2C2O75185 946 aa18.96■□□□□ 0.63
RTN4-204ENST00000357732 GTF2BQ00403 316 aa18.96■□□□□ 0.63
RTN4-204ENST00000357732 CDR2Q01850 454 aa18.96■□□□□ 0.63
RTN4-204ENST00000357732 ENPEPQ07075 957 aa18.96■□□□□ 0.63
RTN4-204ENST00000357732 C1orf220Q5T0J3 134 aa18.96■□□□□ 0.63
RTN4-204ENST00000357732 NIPA1Q7RTP0 329 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms