RNA–Protein interactions for RNA: ENST00000357641.10

BRPF3-202, Transcript of bromodomain and PHD finger containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRPF3, Length 6,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-202ENST00000357641 C1orf228Q6PIY5 440 aa20.27■□□□□ 0.84
BRPF3-202ENST00000357641 TMC5Q6UXY8 1006 aa20.27■□□□□ 0.84
BRPF3-202ENST00000357641 MAFGO15525 162 aa20.27■□□□□ 0.84
BRPF3-202ENST00000357641 STRNO43815 780 aa20.27■□□□□ 0.84
BRPF3-202ENST00000357641 DGKIO75912 1065 aa20.27■□□□□ 0.84
BRPF3-202ENST00000357641 RAB14P61106 215 aa20.27■□□□□ 0.84
BRPF3-202ENST00000357641 TMEM35BQ8NCS4 154 aa20.27■□□□□ 0.84
BRPF3-202ENST00000357641 OTULINQ96BN8 352 aa20.27■□□□□ 0.84
BRPF3-202ENST00000357641 OMA1Q96E52 524 aa20.27■□□□□ 0.84
BRPF3-202ENST00000357641 DIABLOQ9NR28 239 aa20.27■□□□□ 0.84
BRPF3-202ENST00000357641 CCNL1Q9UK58 526 aaPredicted RBP20.27■□□□□ 0.84
BRPF3-202ENST00000357641 DTNAQ9Y4J8 743 aa20.27■□□□□ 0.84
BRPF3-202ENST00000357641 PZPP20742 1482 aa20.27■□□□□ 0.83
BRPF3-202ENST00000357641 TYW5A2RUC4 315 aaKnown RBP20.27■□□□□ 0.83
BRPF3-202ENST00000357641 SRP72O76094 671 aaKnown RBP20.27■□□□□ 0.83
BRPF3-202ENST00000357641 RAD9BQ6WBX8 426 aa20.27■□□□□ 0.83
BRPF3-202ENST00000357641 HDDC2Q7Z4H3 204 aa20.27■□□□□ 0.83
BRPF3-202ENST00000357641 C9orf72Q96LT7 481 aa20.27■□□□□ 0.83
BRPF3-202ENST00000357641 TSR3Q9UJK0 312 aaKnown RBP20.27■□□□□ 0.83
BRPF3-202ENST00000357641 NAALADL2Q58DX5 795 aa20.26■□□□□ 0.83
BRPF3-202ENST00000357641 ARHGAP22Q7Z5H3 698 aa20.26■□□□□ 0.83
BRPF3-202ENST00000357641 LARGE2Q8N3Y3 721 aa20.26■□□□□ 0.83
BRPF3-202ENST00000357641 SARS2Q9NP81 518 aaKnown RBP20.26■□□□□ 0.83
BRPF3-202ENST00000357641 PSMC3IPQ9P2W1 217 aaPredicted RBP20.26■□□□□ 0.83
BRPF3-202ENST00000357641 A0A1B0GTH6 734 aa20.26■□□□□ 0.83
BRPF3-202ENST00000357641 RUNX1T1Q06455 604 aa20.26■□□□□ 0.83
BRPF3-202ENST00000357641 CMTM5Q96DZ9 223 aa20.26■□□□□ 0.83
BRPF3-202ENST00000357641 BBS2Q9BXC9 721 aa20.26■□□□□ 0.83
BRPF3-202ENST00000357641 EXOSC4Q9NPD3 245 aaKnown RBP20.26■□□□□ 0.83
BRPF3-202ENST00000357641 ZNF521Q96K83 1311 aa20.26■□□□□ 0.83
BRPF3-202ENST00000357641 KLHL2O95198 593 aa20.26■□□□□ 0.83
BRPF3-202ENST00000357641 HEATR6Q6AI08 1181 aaKnown RBP20.26■□□□□ 0.83
BRPF3-202ENST00000357641 LVRNQ6Q4G3 990 aa20.26■□□□□ 0.83
BRPF3-202ENST00000357641 ZNF786Q8N393 782 aa20.26■□□□□ 0.83
BRPF3-202ENST00000357641 STX19Q8N4C7 294 aa20.26■□□□□ 0.83
BRPF3-202ENST00000357641 ATL2Q8NHH9 583 aa20.26■□□□□ 0.83
BRPF3-202ENST00000357641 MYCBPAPQ8TBZ2 947 aa20.26■□□□□ 0.83
BRPF3-202ENST00000357641 RBM15Q96T37 977 aaKnown RBP eCLIP20.26■□□□□ 0.835e-7■■■■□ 23.6
BRPF3-202ENST00000357641 MYO1GB0I1T2 1018 aa20.26■□□□□ 0.83
BRPF3-202ENST00000357641 LUZP2Q86TE4 346 aa20.26■□□□□ 0.83
BRPF3-202ENST00000357641 HNRNPLLQ8WVV9 542 aaKnown RBP20.26■□□□□ 0.83
BRPF3-202ENST00000357641 DYNLL2Q96FJ2 89 aa20.26■□□□□ 0.83
BRPF3-202ENST00000357641 FUT8Q9BYC5 575 aa20.26■□□□□ 0.83
BRPF3-202ENST00000357641 TRIM25Q14258 630 aaKnown RBP20.25■□□□□ 0.83
BRPF3-202ENST00000357641 METTL16Q86W50 562 aaKnown RBP20.25■□□□□ 0.83
BRPF3-202ENST00000357641 MXD3Q9BW11 206 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 SEL1LQ9UBV2 794 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 LCMT1Q9UIC8 334 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 HAO1Q9UJM8 370 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 TCOF1Q13428 1488 aaKnown RBP20.25■□□□□ 0.83
BRPF3-202ENST00000357641 ATP6V1G2O95670 118 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 FMR1Q06787 632 aaKnown RBP eCLIP20.25■□□□□ 0.833e-6■■□□□ 11.7
BRPF3-202ENST00000357641 MKRN4PQ13434 485 aaPredicted RBP20.25■□□□□ 0.83
BRPF3-202ENST00000357641 CCDC81Q6ZN84 652 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 MTRQ99707 1265 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 SLC9A2Q9UBY0 812 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 USP17L3A6NCW0 530 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 USP17L4A6NCW7 530 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 KIF28PB7ZC32 967 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 TMCC1O94876 653 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 USP17L1Q7RTZ2 530 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 HOMEZQ8IX15 550 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 MICU2Q8IYU8 434 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 PPP1R16BQ96T49 567 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 KLHL11Q9NVR0 708 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 NYAP1Q6ZVC0 841 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 METTL23Q86XA0 190 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 NCAPG2Q86XI2 1143 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 DDI1Q8WTU0 396 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 AS3MTQ9HBK9 375 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 CASS4Q9NQ75 786 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 SH3GLB2Q9NR46 395 aa20.25■□□□□ 0.83
BRPF3-202ENST00000357641 HERC5Q9UII4 1024 aaKnown RBP20.25■□□□□ 0.83
BRPF3-202ENST00000357641 HSPA1AP0DMV8 641 aaKnown RBP20.24■□□□□ 0.83
BRPF3-202ENST00000357641 HSPA1BP0DMV9 641 aaKnown RBP20.24■□□□□ 0.83
BRPF3-202ENST00000357641 SSTR3P32745 418 aaPredicted RBP20.24■□□□□ 0.83
BRPF3-202ENST00000357641 IFNEQ86WN2 208 aa20.24■□□□□ 0.83
BRPF3-202ENST00000357641 DDX56Q9NY93 547 aaKnown RBP20.24■□□□□ 0.83
BRPF3-202ENST00000357641 TSC22D2O75157 780 aa20.24■□□□□ 0.83
BRPF3-202ENST00000357641 PPARGP37231 505 aaPredicted RBP20.24■□□□□ 0.83
BRPF3-202ENST00000357641 ZNF408Q9H9D4 720 aa20.24■□□□□ 0.83
BRPF3-202ENST00000357641 MCM8Q9UJA3 840 aa20.24■□□□□ 0.83
BRPF3-202ENST00000357641 FCER1AP12319 257 aa20.24■□□□□ 0.83
BRPF3-202ENST00000357641 TBL3Q12788 808 aaKnown RBP20.24■□□□□ 0.83
BRPF3-202ENST00000357641 PCMTD2Q9NV79 361 aa20.24■□□□□ 0.83
BRPF3-202ENST00000357641 CAND2O75155 1236 aa20.24■□□□□ 0.83
BRPF3-202ENST00000357641 GRK2P25098 689 aa20.24■□□□□ 0.83
BRPF3-202ENST00000357641 ABCD1P33897 745 aa20.24■□□□□ 0.83
BRPF3-202ENST00000357641 KLF6Q99612 283 aaPredicted RBP20.24■□□□□ 0.83
BRPF3-202ENST00000357641 NDEL1Q9GZM8 345 aa20.24■□□□□ 0.83
BRPF3-202ENST00000357641 SYBUQ9NX95 663 aa20.24■□□□□ 0.83
BRPF3-202ENST00000357641 RPAP1Q9BWH6 1393 aaPredicted RBP20.24■□□□□ 0.83
BRPF3-202ENST00000357641 PVALEFA0A1B0GWK0 134 aa20.24■□□□□ 0.83
BRPF3-202ENST00000357641 ORC4O43929 436 aa20.24■□□□□ 0.83
BRPF3-202ENST00000357641 HOXA13P31271 388 aaPredicted RBP20.24■□□□□ 0.83
BRPF3-202ENST00000357641 FXR1P51114 621 aaKnown RBP eCLIP20.24■□□□□ 0.83
BRPF3-202ENST00000357641 TC2NQ8N9U0 490 aa20.24■□□□□ 0.83
BRPF3-202ENST00000357641 RPF1Q9H9Y2 349 aaKnown RBP20.24■□□□□ 0.83
BRPF3-202ENST00000357641 SESN1Q9Y6P5 492 aa20.24■□□□□ 0.83
BRPF3-202ENST00000357641 YEATS2Q9ULM3 1422 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms