RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 GLUD2P49448 558 aa11.34□□□□□ -0.59
LINC01560-201ENST00000357412 NUBP1P53384 320 aa11.34□□□□□ -0.59
LINC01560-201ENST00000357412 TRIM29Q14134 588 aa11.34□□□□□ -0.59
LINC01560-201ENST00000357412 CDCA2Q69YH5 1023 aaPredicted RBP11.34□□□□□ -0.59
LINC01560-201ENST00000357412 SLC27A1Q6PCB7 646 aa11.34□□□□□ -0.59
LINC01560-201ENST00000357412 MAEAQ7L5Y9 396 aa11.34□□□□□ -0.59
LINC01560-201ENST00000357412 OTOP3Q7RTS5 596 aa11.34□□□□□ -0.59
LINC01560-201ENST00000357412 GPR62Q9BZJ7 368 aa11.34□□□□□ -0.59
LINC01560-201ENST00000357412 TRIM6Q9C030 488 aaPredicted RBP11.34□□□□□ -0.59
LINC01560-201ENST00000357412 FZD8Q9H461 694 aa11.34□□□□□ -0.59
LINC01560-201ENST00000357412 TUFT1Q9NNX1 390 aa11.34□□□□□ -0.59
LINC01560-201ENST00000357412 SSX2IPQ9Y2D8 614 aa11.34□□□□□ -0.59
LINC01560-201ENST00000357412 TTLL13PA6NNM8 815 aa11.33□□□□□ -0.6
LINC01560-201ENST00000357412 N4BP1O75113 896 aaKnown RBP11.33□□□□□ -0.6
LINC01560-201ENST00000357412 NR1I2O75469 434 aa11.33□□□□□ -0.6
LINC01560-201ENST00000357412 PAPLNO95428 1278 aa11.33□□□□□ -0.6
LINC01560-201ENST00000357412 NPTXRO95502 500 aa11.33□□□□□ -0.6
LINC01560-201ENST00000357412 GLUD1P00367 558 aa11.33□□□□□ -0.6
LINC01560-201ENST00000357412 GUCY1B3Q02153 619 aa11.33□□□□□ -0.6
LINC01560-201ENST00000357412 FUT10Q6P4F1 479 aa11.33□□□□□ -0.6
LINC01560-201ENST00000357412 GPR65Q8IYL9 337 aa11.33□□□□□ -0.6
LINC01560-201ENST00000357412 HACE1Q8IYU2 909 aa11.33□□□□□ -0.6
LINC01560-201ENST00000357412 TMEM105Q8N8V8 129 aa11.33□□□□□ -0.6
LINC01560-201ENST00000357412 BSNDQ8WZ55 320 aa11.33□□□□□ -0.6
LINC01560-201ENST00000357412 ACSF2Q96CM8 615 aaPredicted RBP11.33□□□□□ -0.6
LINC01560-201ENST00000357412 B3GALT6Q96L58 329 aa11.33□□□□□ -0.6
LINC01560-201ENST00000357412 PRIMPOLQ96LW4 560 aa11.33□□□□□ -0.6
LINC01560-201ENST00000357412 CCDC43Q96MW1 224 aaKnown RBP11.33□□□□□ -0.6
LINC01560-201ENST00000357412 NACC1Q96RE7 527 aa11.33□□□□□ -0.6
LINC01560-201ENST00000357412 POLR3CQ9BUI4 534 aaPredicted RBP11.33□□□□□ -0.6
LINC01560-201ENST00000357412 COLEC11Q9BWP8 271 aa11.33□□□□□ -0.6
LINC01560-201ENST00000357412 RHOBTB2Q9BYZ6 727 aa11.33□□□□□ -0.6
LINC01560-201ENST00000357412 MAN1C1Q9NR34 630 aa11.33□□□□□ -0.6
LINC01560-201ENST00000357412 FAM86C1Q9NVL1 165 aa11.33□□□□□ -0.6
LINC01560-201ENST00000357412 PRMT7Q9NVM4 692 aaPredicted RBP11.33□□□□□ -0.6
LINC01560-201ENST00000357412 KLK14Q9P0G3 267 aa11.33□□□□□ -0.6
LINC01560-201ENST00000357412 PARP2Q9UGN5 583 aa11.33□□□□□ -0.6
LINC01560-201ENST00000357412 NLRC5Q86WI3 1866 aa11.32□□□□□ -0.6
LINC01560-201ENST00000357412 CCDC195A0A1B0GUA6 201 aa11.32□□□□□ -0.6
LINC01560-201ENST00000357412 LRRIQ4A6NIV6 560 aa11.32□□□□□ -0.6
LINC01560-201ENST00000357412 GALR2O43603 387 aaPredicted RBP11.32□□□□□ -0.6
LINC01560-201ENST00000357412 RFPL2O75678 378 aa11.32□□□□□ -0.6
LINC01560-201ENST00000357412 C1RP00736 705 aa11.32□□□□□ -0.6
LINC01560-201ENST00000357412 MYBP10242 640 aa11.32□□□□□ -0.6
LINC01560-201ENST00000357412 CYP11B2P19099 503 aa11.32□□□□□ -0.6
LINC01560-201ENST00000357412 GRIK3Q13003 919 aa11.32□□□□□ -0.6
LINC01560-201ENST00000357412 SAFBQ15424 915 aaKnown RBP eCLIP11.32□□□□□ -0.6
LINC01560-201ENST00000357412 ZNF174Q15697 407 aa11.32□□□□□ -0.6
LINC01560-201ENST00000357412 FAM187BQ17R55 369 aa11.32□□□□□ -0.6
LINC01560-201ENST00000357412 LILRA6Q6PI73 481 aa11.32□□□□□ -0.6
LINC01560-201ENST00000357412 POTEGQ6S5H5 508 aa11.32□□□□□ -0.6
LINC01560-201ENST00000357412 CYP26C1Q6V0L0 522 aa11.32□□□□□ -0.6
LINC01560-201ENST00000357412 MCPH1Q8NEM0 835 aa11.32□□□□□ -0.6
LINC01560-201ENST00000357412 RABGGTAQ92696 567 aa11.32□□□□□ -0.6
LINC01560-201ENST00000357412 ZNF707Q96C28 371 aaPredicted RBP11.32□□□□□ -0.6
LINC01560-201ENST00000357412 PDZD7Q9H5P4 517 aa11.32□□□□□ -0.6
LINC01560-201ENST00000357412 KCNK12Q9HB15 430 aa11.32□□□□□ -0.6
LINC01560-201ENST00000357412 WDR6Q9NNW5 1121 aaKnown RBP11.32□□□□□ -0.6
LINC01560-201ENST00000357412 USP20Q9Y2K6 914 aa11.32□□□□□ -0.6
LINC01560-201ENST00000357412 ZMYM2Q9UBW7 1377 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 H0Y858 1186 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 TGM5O43548 720 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 OR52Z1P0C646 297 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 SPATA31D3P0C874 917 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 RPA1P27694 616 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 ORC2Q13416 577 aaPredicted RBP11.31□□□□□ -0.6
LINC01560-201ENST00000357412 TDGQ13569 410 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 ECM1Q16610 540 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 USP41Q3LFD5 358 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 RTP2Q5QGT7 225 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 ERICH6BQ5W0A0 696 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 CWF19L1Q69YN2 538 aaKnown RBP11.31□□□□□ -0.6
LINC01560-201ENST00000357412 ASTLQ6HA08 431 aaPredicted RBP11.31□□□□□ -0.6
LINC01560-201ENST00000357412 PADI6Q6TGC4 694 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 SPATA31D4Q6ZUB0 917 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 PALB2Q86YC2 1186 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 CCDC83Q8IWF9 413 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 HDAC7Q8WUI4 952 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 ATOH1Q92858 354 aaPredicted RBP11.31□□□□□ -0.6
LINC01560-201ENST00000357412 C8orf76Q96K31 380 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 PAAF1Q9BRP4 392 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 LLPHQ9BRT6 129 aaKnown RBP11.31□□□□□ -0.6
LINC01560-201ENST00000357412 CCDC113Q9H0I3 377 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 IRF2BPLQ9H1B7 796 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 CXCL16Q9H2A7 254 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 FOXP1Q9H334 677 aaPredicted RBP11.31□□□□□ -0.6
LINC01560-201ENST00000357412 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.31□□□□□ -0.6
LINC01560-201ENST00000357412 FNIP2Q9P278 1114 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 CACNG4Q9UBN1 327 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 DPP7Q9UHL4 492 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 ADAM28Q9UKQ2 775 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 DUSP12Q9UNI6 340 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 LIMCH1Q9UPQ0 1083 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 ATG2AQ2TAZ0 1938 aa11.31□□□□□ -0.6
LINC01560-201ENST00000357412 FNDC1Q4ZHG4 1894 aaPredicted RBP11.3□□□□□ -0.6
LINC01560-201ENST00000357412 ARHGEF35A5YM69 484 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 ACKR2O00590 384 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 PTGESO14684 152 aa11.3□□□□□ -0.6
LINC01560-201ENST00000357412 EIF5BO60841 1220 aaKnown RBP11.3□□□□□ -0.6
LINC01560-201ENST00000357412 TADA2AO75478 443 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms