RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 TRIM50Q86XT4 487 aa13.71□□□□□ -0.21
RTFDC1-202ENST00000357348 SCFD2Q8WU76 684 aa13.71□□□□□ -0.21
RTFDC1-202ENST00000357348 LENG1Q96BZ8 264 aaPredicted RBP13.71□□□□□ -0.21
RTFDC1-202ENST00000357348 SPATA33Q96N06 139 aa13.71□□□□□ -0.21
RTFDC1-202ENST00000357348 KRT12Q99456 494 aa13.71□□□□□ -0.21
RTFDC1-202ENST00000357348 SLC12A6Q9UHW9 1150 aa13.71□□□□□ -0.21
RTFDC1-202ENST00000357348 STK24Q9Y6E0 443 aa13.71□□□□□ -0.21
RTFDC1-202ENST00000357348 MYH11P35749 1972 aa13.71□□□□□ -0.21
RTFDC1-202ENST00000357348 SYNGAP1Q96PV0 1343 aa13.71□□□□□ -0.22
RTFDC1-202ENST00000357348 ESYT3A0FGR9 886 aa13.71□□□□□ -0.22
RTFDC1-202ENST00000357348 RSPH10B2B2RC85 870 aa13.71□□□□□ -0.22
RTFDC1-202ENST00000357348 NOP56O00567 594 aaKnown RBP13.71□□□□□ -0.22
RTFDC1-202ENST00000357348 RAD51CO43502 376 aa13.71□□□□□ -0.22
RTFDC1-202ENST00000357348 ZNF862O60290 1169 aa13.71□□□□□ -0.22
RTFDC1-202ENST00000357348 RSPH10BP0C881 870 aa13.71□□□□□ -0.22
RTFDC1-202ENST00000357348 TGFB3P10600 412 aa13.71□□□□□ -0.22
RTFDC1-202ENST00000357348 YWHABP31946 246 aaKnown RBP13.71□□□□□ -0.22
RTFDC1-202ENST00000357348 TCF7P36402 384 aaPredicted RBP13.71□□□□□ -0.22
RTFDC1-202ENST00000357348 FCGRTP55899 365 aa13.71□□□□□ -0.22
RTFDC1-202ENST00000357348 PRKCZQ05513 592 aa13.71□□□□□ -0.22
RTFDC1-202ENST00000357348 ACVR2BQ13705 512 aa13.71□□□□□ -0.22
RTFDC1-202ENST00000357348 CCDC62Q6P9F0 684 aa13.71□□□□□ -0.22
RTFDC1-202ENST00000357348 ABHD15Q6UXT9 468 aa13.71□□□□□ -0.22
RTFDC1-202ENST00000357348 SYT2Q8N9I0 419 aaPredicted RBP13.71□□□□□ -0.22
RTFDC1-202ENST00000357348 IFT81Q8WYA0 676 aa13.71□□□□□ -0.22
RTFDC1-202ENST00000357348 NACC1Q96RE7 527 aa13.71□□□□□ -0.22
RTFDC1-202ENST00000357348 LRRC27Q9C0I9 530 aa13.71□□□□□ -0.22
RTFDC1-202ENST00000357348 KATNBL1Q9H079 304 aa13.71□□□□□ -0.22
RTFDC1-202ENST00000357348 AIPL1Q9NZN9 384 aa13.71□□□□□ -0.22
RTFDC1-202ENST00000357348 PLAAQ9Y263 795 aa13.71□□□□□ -0.22
RTFDC1-202ENST00000357348 ATP8B3O60423 1300 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 LOC102724159A0A0B4J2E5 919 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 GSTTP1A0A1W2PQM5 241 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 C5orf60A6NFR6 353 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 CHUKO15111 745 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 ADCY6O43306 1168 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 EYA4O95677 639 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 PAEPP09466 180 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 MARK3P27448 753 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 MAP2K2P36507 400 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 RGS2P41220 211 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 FLT3LGP49771 235 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 PSMC5P62195 406 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 CUL1Q13616 776 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 PWP2Q15269 919 aaKnown RBP13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 CELF3Q5SZQ8 465 aaKnown RBP13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 MIS18BP1Q6P0N0 1132 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 MAMDC4Q6UXC1 1216 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 ZNF467Q7Z7K2 595 aaPredicted RBP13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 CD99L2Q8TCZ2 262 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 TSG101Q99816 390 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 ACTR5Q9H9F9 607 aaPredicted RBP13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 DIS3Q9Y2L1 958 aaKnown RBP13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 COL4A3BPQ9Y5P4 624 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 SUPT20HL2P0C7V6 817 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 GUCY2FP51841 1108 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 SEC24CP53992 1094 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 BIRC3Q13489 604 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 TDRD12Q587J7 1177 aaKnown RBP13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 RINT1Q6NUQ1 792 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 METTL7BQ6UX53 244 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 ZC3H3Q8IXZ2 948 aaKnown RBP13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 GLIS3Q8NEA6 775 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 USP6NLQ92738 828 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 DNAJC19Q96DA6 116 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 CALR3Q96L12 384 aaKnown RBP13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 CEP63Q96MT8 703 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 REEP2Q9BRK0 252 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 ABHD16BQ9H3Z7 469 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 VTA1Q9NP79 307 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 ZNF302Q9NR11 478 aa13.7□□□□□ -0.22
RTFDC1-202ENST00000357348 ZNF236Q9UL36 1845 aa13.69□□□□□ -0.22
RTFDC1-202ENST00000357348 ARHGEF35A5YM69 484 aa13.69□□□□□ -0.22
RTFDC1-202ENST00000357348 FTCDO95954 541 aa13.69□□□□□ -0.22
RTFDC1-202ENST00000357348 SMPD1P17405 629 aa13.69□□□□□ -0.22
RTFDC1-202ENST00000357348 FKBP3Q00688 224 aaKnown RBP13.69□□□□□ -0.22
RTFDC1-202ENST00000357348 LRRC41Q15345 812 aa13.69□□□□□ -0.22
RTFDC1-202ENST00000357348 TRADDQ15628 312 aa13.69□□□□□ -0.22
RTFDC1-202ENST00000357348 UAP1Q16222 522 aaPredicted RBP13.69□□□□□ -0.22
RTFDC1-202ENST00000357348 XKR9Q5GH70 373 aa13.69□□□□□ -0.22
RTFDC1-202ENST00000357348 C10orf76Q5T2E6 689 aa13.69□□□□□ -0.22
RTFDC1-202ENST00000357348 AGBL2Q5U5Z8 902 aa13.69□□□□□ -0.22
RTFDC1-202ENST00000357348 ANO5Q75V66 913 aa13.69□□□□□ -0.22
RTFDC1-202ENST00000357348 ACTRT1Q8TDG2 376 aa13.69□□□□□ -0.22
RTFDC1-202ENST00000357348 CYFIP2Q96F07 1278 aa13.69□□□□□ -0.22
RTFDC1-202ENST00000357348 PBKQ96KB5 322 aa13.69□□□□□ -0.22
RTFDC1-202ENST00000357348 CXorf56Q9H5V9 222 aa13.69□□□□□ -0.22
RTFDC1-202ENST00000357348 PANK4Q9NVE7 773 aa13.69□□□□□ -0.22
RTFDC1-202ENST00000357348 SEPT9Q9UHD8 586 aaPredicted RBP13.69□□□□□ -0.22
RTFDC1-202ENST00000357348 TRAPPC3O43617 180 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 HSD17B3P37058 310 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 PRKCEQ02156 737 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 GIT2Q14161 759 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 CEP85LQ5SZL2 805 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 TRIM59Q8IWR1 403 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 CCDC13Q8IYE1 715 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 NEK9Q8TD19 979 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 SOCS4Q8WXH5 440 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 SEPT1Q8WYJ6 367 aa13.68□□□□□ -0.22
RTFDC1-202ENST00000357348 GLG1Q92896 1179 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms