RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 DCUN1D2Q6PH85 259 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 PGM2Q96G03 612 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 CCDC17Q96LX7 622 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 SLC4A9Q96Q91 983 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 IKZF4Q9H2S9 585 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 NPHS2Q9NP85 383 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 STOML1Q9UBI4 398 aa13.39□□□□□ -0.27
BDNF-202ENST00000356660 PPFIA2O75334 1257 aa13.38□□□□□ -0.27
BDNF-202ENST00000356660 NTSR2O95665 410 aa13.38□□□□□ -0.27
BDNF-202ENST00000356660 PLS3P13797 630 aa13.38□□□□□ -0.27
BDNF-202ENST00000356660 COILP38432 576 aaPredicted RBP13.38□□□□□ -0.27
BDNF-202ENST00000356660 CTAGE3PQ8IX95 158 aa13.38□□□□□ -0.27
BDNF-202ENST00000356660 DCTN3O75935 186 aa13.38□□□□□ -0.27
BDNF-202ENST00000356660 RARGP13631 454 aa13.38□□□□□ -0.27
BDNF-202ENST00000356660 TRPC3Q13507 836 aa13.38□□□□□ -0.27
BDNF-202ENST00000356660 SLC20A1Q8WUM9 679 aa13.38□□□□□ -0.27
BDNF-202ENST00000356660 DNAJC19Q96DA6 116 aa13.38□□□□□ -0.27
BDNF-202ENST00000356660 MYH15Q9Y2K3 1946 aa13.38□□□□□ -0.27
BDNF-202ENST00000356660 MYH2Q9UKX2 1941 aa13.38□□□□□ -0.27
BDNF-202ENST00000356660 ESRRAP11474 423 aaPredicted RBP13.38□□□□□ -0.27
BDNF-202ENST00000356660 SSTR3P32745 418 aaPredicted RBP13.38□□□□□ -0.27
BDNF-202ENST00000356660 ITGA8P53708 1063 aa13.38□□□□□ -0.27
BDNF-202ENST00000356660 NFIXQ14938 502 aa13.38□□□□□ -0.27
BDNF-202ENST00000356660 PHLDB3Q6NSJ2 640 aa13.38□□□□□ -0.27
BDNF-202ENST00000356660 FBXO33Q7Z6M2 555 aa13.38□□□□□ -0.27
BDNF-202ENST00000356660 CATSPER3Q86XQ3 398 aa13.38□□□□□ -0.27
BDNF-202ENST00000356660 RBM46Q8TBY0 533 aaKnown RBP13.38□□□□□ -0.27
BDNF-202ENST00000356660 MXD3Q9BW11 206 aa13.38□□□□□ -0.27
BDNF-202ENST00000356660 UBN1Q9NPG3 1134 aa13.38□□□□□ -0.27
BDNF-202ENST00000356660 PAPOLBQ9NRJ5 636 aaKnown RBP13.38□□□□□ -0.27
BDNF-202ENST00000356660 AGTPBP1Q9UPW5 1226 aa13.38□□□□□ -0.27
BDNF-202ENST00000356660 EMSYQ7Z589 1322 aa13.38□□□□□ -0.27
BDNF-202ENST00000356660 PITPNM2Q9BZ72 1349 aa13.38□□□□□ -0.27
BDNF-202ENST00000356660 RBAK-RBAKDNI3L0D1 243 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 KIAA0391O15091 583 aaKnown RBP13.37□□□□□ -0.27
BDNF-202ENST00000356660 CYP26A1O43174 497 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 GH1P01241 217 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 MXI1P50539 228 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 AUHQ13825 339 aaKnown RBP13.37□□□□□ -0.27
BDNF-202ENST00000356660 C2CD6Q53TS8 623 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 EAPPQ56P03 285 aaPredicted RBP13.37□□□□□ -0.27
BDNF-202ENST00000356660 EXOC3L1Q86VI1 746 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 ALG3Q92685 438 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 MED1Q15648 1581 aaPredicted RBP13.37□□□□□ -0.27
BDNF-202ENST00000356660 ZBTB5O15062 677 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 BMP3P12645 472 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 OVGP1Q12889 678 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 ITPK1Q13572 414 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 ARHGEF16Q5VV41 709 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 CHADLQ6NUI6 762 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 CRELD2Q6UXH1 353 aaPredicted RBP13.37□□□□□ -0.27
BDNF-202ENST00000356660 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.37□□□□□ -0.27
BDNF-202ENST00000356660 PWWP2AQ96N64 755 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 KLF6Q99612 283 aaPredicted RBP13.37□□□□□ -0.27
BDNF-202ENST00000356660 TTC1Q99614 292 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 APEX2Q9UBZ4 518 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 H0YGN5 161 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 MMP13P45452 471 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 QRICH1Q2TAL8 776 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 EPC2Q52LR7 807 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 PALM2Q8IXS6 379 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 FBXO41Q8TF61 875 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 RUSC1Q9BVN2 902 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 RXFP1Q9HBX9 757 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 NFS1Q9Y697 457 aa13.37□□□□□ -0.27
BDNF-202ENST00000356660 NID2Q14112 1375 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 CDH16O75309 829 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 LGR5O75473 907 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 CAMTA2O94983 1202 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 CBX6O95503 412 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 ARHGAP27Q6ZUM4 889 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 TRMT10CQ7L0Y3 403 aaKnown RBP13.36□□□□□ -0.27
BDNF-202ENST00000356660 EIF1ADQ8N9N8 165 aaKnown RBP13.36□□□□□ -0.27
BDNF-202ENST00000356660 HIPK4Q8NE63 616 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 MAIP1Q8WWC4 291 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 MTMR9Q96QG7 549 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 MTFR1LQ9H019 292 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 LRRC4CQ9HCJ2 640 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 KLHL11Q9NVR0 708 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 TRPC5Q9UL62 973 aaPredicted RBP13.36□□□□□ -0.27
BDNF-202ENST00000356660 MAP3K7O43318 606 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 PYGMP11217 842 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 EPHB2P29323 1055 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 DYNLT1P63172 113 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 IZUMO3Q5VZ72 239 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 DUPD1Q68J44 220 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 EEPD1Q7L9B9 569 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 ZNF354CQ86Y25 554 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 SLC13A5Q86YT5 568 aaPredicted RBP13.36□□□□□ -0.27
BDNF-202ENST00000356660 ARHGAP24Q8N264 748 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 C1orf131Q8NDD1 294 aaKnown RBP13.36□□□□□ -0.27
BDNF-202ENST00000356660 ELMO3Q96BJ8 720 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 SNF8Q96H20 258 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 MRPL11Q9Y3B7 192 aaKnown RBP13.36□□□□□ -0.27
BDNF-202ENST00000356660 hCG_2014768A0A024R1R8 64 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 NVLO15381 856 aaKnown RBP13.36□□□□□ -0.27
BDNF-202ENST00000356660 CA8P35219 290 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 COG2Q14746 738 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 CC2D2BQ6DHV5 1058 aa13.36□□□□□ -0.27
BDNF-202ENST00000356660 TTC17Q96AE7 1141 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms