RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 XXYLT1Q8NBI6 393 aa19.29■□□□□ 0.68
CTSB-202ENST00000353047 HIPK4Q8NE63 616 aa19.29■□□□□ 0.68
CTSB-202ENST00000353047 SPOCK2Q92563 424 aa19.29■□□□□ 0.68
CTSB-202ENST00000353047 SLC12A6Q9UHW9 1150 aa19.29■□□□□ 0.68
CTSB-202ENST00000353047 AKAP11Q9UKA4 1901 aa19.28■□□□□ 0.68
CTSB-202ENST00000353047 LRRD1A4D1F6 860 aa19.28■□□□□ 0.68
CTSB-202ENST00000353047 TGFB1I1O43294 461 aa19.28■□□□□ 0.68
CTSB-202ENST00000353047 LGR5O75473 907 aa19.28■□□□□ 0.68
CTSB-202ENST00000353047 PPP1R21Q6ZMI0 780 aa19.28■□□□□ 0.68
CTSB-202ENST00000353047 RUBCNQ92622 972 aa19.28■□□□□ 0.68
CTSB-202ENST00000353047 METTL5Q9NRN9 209 aaKnown RBP19.28■□□□□ 0.68
CTSB-202ENST00000353047 FOSP01100 380 aaPredicted RBP19.28■□□□□ 0.68
CTSB-202ENST00000353047 MFAP3P55082 362 aa19.28■□□□□ 0.68
CTSB-202ENST00000353047 IL9RQ01113 521 aa19.28■□□□□ 0.68
CTSB-202ENST00000353047 IZUMO3Q5VZ72 239 aa19.28■□□□□ 0.68
CTSB-202ENST00000353047 PCDHB4Q9Y5E5 795 aa19.28■□□□□ 0.68
CTSB-202ENST00000353047 HAUS6Q7Z4H7 955 aa19.28■□□□□ 0.68
CTSB-202ENST00000353047 SLC13A5Q86YT5 568 aaPredicted RBP19.28■□□□□ 0.68
CTSB-202ENST00000353047 ZBED8Q8IZ13 594 aa19.28■□□□□ 0.68
CTSB-202ENST00000353047 ZSWIM1Q9BR11 485 aa19.28■□□□□ 0.68
CTSB-202ENST00000353047 KIF9Q9HAQ2 790 aa19.28■□□□□ 0.68
CTSB-202ENST00000353047 ARHGEF10LQ9HCE6 1279 aa19.28■□□□□ 0.68
CTSB-202ENST00000353047 C1orf112Q9NSG2 853 aa19.28■□□□□ 0.68
CTSB-202ENST00000353047 PRR12Q9ULL5 1215 aa19.28■□□□□ 0.68
CTSB-202ENST00000353047 CFAP69A5D8W1 941 aa19.27■□□□□ 0.68
CTSB-202ENST00000353047 KIAA0391O15091 583 aaKnown RBP19.27■□□□□ 0.68
CTSB-202ENST00000353047 MAP3K6O95382 1288 aa19.27■□□□□ 0.68
CTSB-202ENST00000353047 KITP10721 976 aa19.27■□□□□ 0.68
CTSB-202ENST00000353047 NOP14P78316 857 aaKnown RBP19.27■□□□□ 0.68
CTSB-202ENST00000353047 PPP3CAQ08209 521 aa19.27■□□□□ 0.68
CTSB-202ENST00000353047 TTC27Q6P3X3 843 aa19.27■□□□□ 0.68
CTSB-202ENST00000353047 CCDC17Q96LX7 622 aa19.27■□□□□ 0.68
CTSB-202ENST00000353047 ATP2A1O14983 1001 aa19.27■□□□□ 0.68
CTSB-202ENST00000353047 ZSCAN5DPP0CG00 497 aa19.27■□□□□ 0.68
CTSB-202ENST00000353047 RALAP11233 206 aa19.27■□□□□ 0.68
CTSB-202ENST00000353047 PPP2R5EQ16537 467 aa19.27■□□□□ 0.68
CTSB-202ENST00000353047 ERMARDQ5T6L9 678 aa19.27■□□□□ 0.68
CTSB-202ENST00000353047 DCAF12L1Q5VU92 463 aa19.27■□□□□ 0.68
CTSB-202ENST00000353047 SMC6Q96SB8 1091 aa19.27■□□□□ 0.68
CTSB-202ENST00000353047 ZWILCHQ9H900 591 aa19.27■□□□□ 0.68
CTSB-202ENST00000353047 NPHS2Q9NP85 383 aa19.27■□□□□ 0.68
CTSB-202ENST00000353047 SLCO1B3Q9NPD5 702 aa19.27■□□□□ 0.68
CTSB-202ENST00000353047 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.27■□□□□ 0.683e-7■■□□□ 12.7
CTSB-202ENST00000353047 HSPBP1Q9NZL4 362 aa19.27■□□□□ 0.68
CTSB-202ENST00000353047 MEIS2O14770 477 aa19.27■□□□□ 0.68
CTSB-202ENST00000353047 TMEM270Q6UE05 265 aa19.27■□□□□ 0.68
CTSB-202ENST00000353047 ERICH1Q86X53 443 aa19.27■□□□□ 0.68
CTSB-202ENST00000353047 MREGQ8N565 214 aa19.27■□□□□ 0.68
CTSB-202ENST00000353047 CERS5Q8N5B7 392 aa19.27■□□□□ 0.68
CTSB-202ENST00000353047 FAM187AA6NFU0 413 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 LRRIQ4A6NIV6 560 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 PIK3R2O00459 728 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 RIPK2O43353 540 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 KRT19P08727 400 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 ACOT2P49753 483 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 PRELPP51888 382 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 GPS1Q13098 491 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 DRP2Q13474 957 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 ARHGEF18Q6ZSZ5 1173 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 TTC17Q96AE7 1141 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 FAM20AQ96MK3 541 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 C12orf65Q9H3J6 166 aaKnown RBP19.26■□□□□ 0.67
CTSB-202ENST00000353047 AGTP01019 485 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 DHX34Q14147 1143 aaKnown RBP19.26■□□□□ 0.67
CTSB-202ENST00000353047 SPOPLQ6IQ16 392 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 CEP170P1Q96L14 293 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 C4AP0C0L4 1744 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 C4BP0C0L5 1744 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 DENND3A2RUS2 1198 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 SMIM24O75264 130 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 GBP1P32455 592 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 RASA3Q14644 834 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 P3H1Q32P28 736 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 ANKRD20A3Q5VUR7 823 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 STMN2Q93045 179 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 ACCSQ96QU6 501 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 RBM15Q96T37 977 aaKnown RBP eCLIP19.26■□□□□ 0.679e-7■■■■□ 22.2
CTSB-202ENST00000353047 OSBPL1AQ9BXW6 950 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 USP21Q9UK80 565 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 AGAP1Q9UPQ3 857 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 SLITRK3O94933 977 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 POLE2P56282 527 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 OGFOD1Q8N543 542 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 NUDCD1Q96RS6 583 aa19.26■□□□□ 0.67
CTSB-202ENST00000353047 MAGED2Q9UNF1 606 aaPredicted RBP19.26■□□□□ 0.67
CTSB-202ENST00000353047 RBAK-RBAKDNI3L0D1 243 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 BBOX1O75936 387 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 CBX6O95503 412 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 NQO1P15559 274 aaKnown RBP19.25■□□□□ 0.67
CTSB-202ENST00000353047 BASP1P80723 227 aaKnown RBP19.25■□□□□ 0.67
CTSB-202ENST00000353047 SEMA3FQ13275 785 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 CEP55Q53EZ4 464 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 CD302Q8IX05 232 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 PALM2Q8IXS6 379 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 LRRC37BQ96QE4 947 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 PPP1R16BQ96T49 567 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 KMT5AQ9NQR1 393 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 GINM1Q9NU53 330 aa19.25■□□□□ 0.67
CTSB-202ENST00000353047 MIF4GDA9UHW6 222 aaKnown RBP19.25■□□□□ 0.67
CTSB-202ENST00000353047 BANF1O75531 89 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms