RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 TAS1R2Q8TE23 839 aa17.88■□□□□ 0.45
PDAP1-201ENST00000350498 ATP8B4Q8TF62 1192 aa17.88■□□□□ 0.45
PDAP1-201ENST00000350498 RNF146Q9NTX7 359 aa17.88■□□□□ 0.45
PDAP1-201ENST00000350498 BHMG1C9JSJ3 638 aaPredicted RBP17.88■□□□□ 0.45
PDAP1-201ENST00000350498 FAM107AO95990 144 aa17.88■□□□□ 0.45
PDAP1-201ENST00000350498 DLATP10515 647 aaKnown RBP17.88■□□□□ 0.45
PDAP1-201ENST00000350498 MXI1P50539 228 aa17.88■□□□□ 0.45
PDAP1-201ENST00000350498 HMGCS2P54868 508 aa17.88■□□□□ 0.45
PDAP1-201ENST00000350498 SF3B2Q13435 895 aaKnown RBP17.88■□□□□ 0.45
PDAP1-201ENST00000350498 MESDQ14696 234 aa17.88■□□□□ 0.45
PDAP1-201ENST00000350498 KRT71Q3SY84 523 aa17.88■□□□□ 0.45
PDAP1-201ENST00000350498 EMC10Q5UCC4 262 aa17.88■□□□□ 0.45
PDAP1-201ENST00000350498 TMEM206Q9H813 350 aa17.88■□□□□ 0.45
PDAP1-201ENST00000350498 INTUQ9ULD6 942 aa17.88■□□□□ 0.45
PDAP1-201ENST00000350498 TBX20Q9UMR3 447 aa17.88■□□□□ 0.45
PDAP1-201ENST00000350498 CTDP1Q9Y5B0 961 aaPredicted RBP17.88■□□□□ 0.45
PDAP1-201ENST00000350498 CES2O00748 559 aa17.87■□□□□ 0.45
PDAP1-201ENST00000350498 MNAT1P51948 309 aa17.87■□□□□ 0.45
PDAP1-201ENST00000350498 PSMC5P62195 406 aa17.87■□□□□ 0.45
PDAP1-201ENST00000350498 POU5F1Q01860 360 aaKnown RBP17.87■□□□□ 0.45
PDAP1-201ENST00000350498 SWSAP1Q6NVH7 229 aa17.87■□□□□ 0.45
PDAP1-201ENST00000350498 EPS8L1Q8TE68 723 aa17.87■□□□□ 0.45
PDAP1-201ENST00000350498 ZNF526Q8TF50 670 aaPredicted RBP17.87■□□□□ 0.45
PDAP1-201ENST00000350498 LMBR1Q8WVP7 490 aa17.87■□□□□ 0.45
PDAP1-201ENST00000350498 DDX20Q9UHI6 824 aaKnown RBP17.87■□□□□ 0.45
PDAP1-201ENST00000350498 ANKRD62A6NC57 917 aa17.87■□□□□ 0.45
PDAP1-201ENST00000350498 GMPSP49915 693 aaPredicted RBP17.87■□□□□ 0.45
PDAP1-201ENST00000350498 DAB2IPQ5VWQ8 1189 aa17.87■□□□□ 0.45
PDAP1-201ENST00000350498 C4orf19Q8IY42 314 aa17.87■□□□□ 0.45
PDAP1-201ENST00000350498 NEK9Q8TD19 979 aa17.87■□□□□ 0.45
PDAP1-201ENST00000350498 JDP2Q8WYK2 163 aa17.87■□□□□ 0.45
PDAP1-201ENST00000350498 LRRC45Q96CN5 670 aa17.87■□□□□ 0.45
PDAP1-201ENST00000350498 TCEAL9Q9UHQ7 104 aa17.87■□□□□ 0.45
PDAP1-201ENST00000350498 KIAA1217Q5T5P2 1943 aa17.86■□□□□ 0.45
PDAP1-201ENST00000350498 NR3C2P08235 984 aa17.86■□□□□ 0.45
PDAP1-201ENST00000350498 NCKAP1LP55160 1127 aa17.86■□□□□ 0.45
PDAP1-201ENST00000350498 SNRNP48Q6IEG0 339 aaKnown RBP17.86■□□□□ 0.45
PDAP1-201ENST00000350498 CYFIP1Q7L576 1253 aa17.86■□□□□ 0.45
PDAP1-201ENST00000350498 SYCE1Q8N0S2 351 aa17.86■□□□□ 0.45
PDAP1-201ENST00000350498 IPO4Q8TEX9 1081 aaKnown RBP17.86■□□□□ 0.45
PDAP1-201ENST00000350498 RAPGEF5Q92565 580 aa17.86■□□□□ 0.45
PDAP1-201ENST00000350498 LPAR1Q92633 364 aa17.86■□□□□ 0.45
PDAP1-201ENST00000350498 C18orf8Q96DM3 657 aa17.86■□□□□ 0.45
PDAP1-201ENST00000350498 CALR3Q96L12 384 aaKnown RBP17.86■□□□□ 0.45
PDAP1-201ENST00000350498 CEP170P1Q96L14 293 aa17.86■□□□□ 0.45
PDAP1-201ENST00000350498 TBC1D22BQ9NU19 505 aa17.86■□□□□ 0.45
PDAP1-201ENST00000350498 NOCTQ9UK39 431 aaKnown RBP17.86■□□□□ 0.45
PDAP1-201ENST00000350498 CAND2O75155 1236 aa17.86■□□□□ 0.45
PDAP1-201ENST00000350498 IBSPP21815 317 aaPredicted RBP17.86■□□□□ 0.45
PDAP1-201ENST00000350498 CNPY4Q8N129 248 aa17.86■□□□□ 0.45
PDAP1-201ENST00000350498 TRIM7Q9C029 511 aa17.86■□□□□ 0.45
PDAP1-201ENST00000350498 PIM2Q9P1W9 311 aa17.86■□□□□ 0.45
PDAP1-201ENST00000350498 SNX24Q9Y343 169 aa17.86■□□□□ 0.45
PDAP1-201ENST00000350498 COL11A1P12107 1806 aaPredicted RBP17.85■□□□□ 0.45
PDAP1-201ENST00000350498 GMNCA6NCL1 334 aa17.85■□□□□ 0.45
PDAP1-201ENST00000350498 WDR64B1ANS9 1081 aa17.85■□□□□ 0.45
PDAP1-201ENST00000350498 LRIG3Q6UXM1 1119 aa17.85■□□□□ 0.45
PDAP1-201ENST00000350498 NIPA1Q7RTP0 329 aa17.85■□□□□ 0.45
PDAP1-201ENST00000350498 CCDC60Q8IWA6 550 aaPredicted RBP17.85■□□□□ 0.45
PDAP1-201ENST00000350498 PARD3BQ8TEW8 1205 aa17.85■□□□□ 0.45
PDAP1-201ENST00000350498 OSBPL7Q9BZF2 842 aa17.85■□□□□ 0.45
PDAP1-201ENST00000350498 TAOK3Q9H2K8 898 aa17.85■□□□□ 0.45
PDAP1-201ENST00000350498 PNMA2Q9UL42 364 aa17.85■□□□□ 0.45
PDAP1-201ENST00000350498 ZNFX1Q9P2E3 1918 aaKnown RBP17.85■□□□□ 0.45
PDAP1-201ENST00000350498 CTNND1O60716 968 aaKnown RBP17.84■□□□□ 0.45
PDAP1-201ENST00000350498 ZBED4O75132 1171 aa17.84■□□□□ 0.45
PDAP1-201ENST00000350498 STBD1O95210 358 aa17.84■□□□□ 0.45
PDAP1-201ENST00000350498 COMTP21964 271 aa17.84■□□□□ 0.45
PDAP1-201ENST00000350498 ANXA13P27216 316 aa17.84■□□□□ 0.45
PDAP1-201ENST00000350498 PLTPP55058 493 aa17.84■□□□□ 0.45
PDAP1-201ENST00000350498 PPP2R2AP63151 447 aa17.84■□□□□ 0.45
PDAP1-201ENST00000350498 FMO1Q01740 532 aa17.84■□□□□ 0.45
PDAP1-201ENST00000350498 SP2Q02086 613 aa17.84■□□□□ 0.45
PDAP1-201ENST00000350498 BYSLQ13895 437 aaKnown RBP17.84■□□□□ 0.45
PDAP1-201ENST00000350498 TAS1R3Q7RTX0 852 aa17.84■□□□□ 0.45
PDAP1-201ENST00000350498 CCDC13Q8IYE1 715 aa17.84■□□□□ 0.45
PDAP1-201ENST00000350498 EPB41L4BQ9H329 900 aa17.84■□□□□ 0.45
PDAP1-201ENST00000350498 CD248Q9HCU0 757 aa17.84■□□□□ 0.45
PDAP1-201ENST00000350498 KMT5AQ9NQR1 393 aa17.84■□□□□ 0.45
PDAP1-201ENST00000350498 XPNPEP1Q9NQW7 623 aa17.84■□□□□ 0.45
PDAP1-201ENST00000350498 CNOT7Q9UIV1 285 aaKnown RBP17.84■□□□□ 0.45
PDAP1-201ENST00000350498 UTP11Q9Y3A2 253 aaKnown RBP17.84■□□□□ 0.45
PDAP1-201ENST00000350498 TLDC2A0PJX2 215 aa17.84■□□□□ 0.45
PDAP1-201ENST00000350498 CCDC188H7C350 402 aa17.84■□□□□ 0.45
PDAP1-201ENST00000350498 DNM1LO00429 736 aa17.84■□□□□ 0.45
PDAP1-201ENST00000350498 TRAPPC3O43617 180 aa17.84■□□□□ 0.45
PDAP1-201ENST00000350498 C6orf89Q6UWU4 347 aa17.84■□□□□ 0.45
PDAP1-201ENST00000350498 VSIG10LQ86VR7 867 aa17.84■□□□□ 0.45
PDAP1-201ENST00000350498 HELQQ8TDG4 1101 aa17.84■□□□□ 0.45
PDAP1-201ENST00000350498 WRNIP1Q96S55 665 aa17.84■□□□□ 0.45
PDAP1-201ENST00000350498 MOV10L1Q9BXT6 1211 aaKnown RBP17.84■□□□□ 0.45
PDAP1-201ENST00000350498 WDR81Q562E7 1941 aa17.84■□□□□ 0.45
PDAP1-201ENST00000350498 LYPLA2O95372 231 aa17.83■□□□□ 0.45
PDAP1-201ENST00000350498 PYGMP11217 842 aa17.83■□□□□ 0.45
PDAP1-201ENST00000350498 TMEM132BQ14DG7 1078 aa17.83■□□□□ 0.45
PDAP1-201ENST00000350498 SUGP1Q8IWZ8 645 aaKnown RBP17.83■□□□□ 0.45
PDAP1-201ENST00000350498 CCDC26Q8TAB7 109 aa17.83■□□□□ 0.45
PDAP1-201ENST00000350498 POMGNT1Q8WZA1 660 aa17.83■□□□□ 0.45
PDAP1-201ENST00000350498 FAM213AQ9BRX8 229 aa17.83■□□□□ 0.45
PDAP1-201ENST00000350498 A6NNZ2 444 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms