RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 IL17AQ16552 155 aa15.71■□□□□ 0.11
NUP50-201ENST00000347635 C15orf52Q6ZUT6 534 aaKnown RBP15.71■□□□□ 0.11
NUP50-201ENST00000347635 TRPM8Q7Z2W7 1104 aa15.71■□□□□ 0.11
NUP50-201ENST00000347635 CATSPER3Q86XQ3 398 aa15.71■□□□□ 0.11
NUP50-201ENST00000347635 GGT7Q9UJ14 662 aa15.71■□□□□ 0.11
NUP50-201ENST00000347635 NRXN3Q9Y4C0 1643 aa15.71■□□□□ 0.11
NUP50-201ENST00000347635 GOLGA8SH3BPF8 625 aa15.71■□□□□ 0.11
NUP50-201ENST00000347635 LPXNO60711 386 aa15.71■□□□□ 0.11
NUP50-201ENST00000347635 SKIP12755 728 aa15.71■□□□□ 0.11
NUP50-201ENST00000347635 SYDE1Q6ZW31 735 aaPredicted RBP15.71■□□□□ 0.11
NUP50-201ENST00000347635 MDM1Q8TC05 714 aa15.71■□□□□ 0.11
NUP50-201ENST00000347635 CD248Q9HCU0 757 aa15.71■□□□□ 0.11
NUP50-201ENST00000347635 GGA3Q9NZ52 723 aa15.71■□□□□ 0.11
NUP50-201ENST00000347635 CYP26A1O43174 497 aa15.71■□□□□ 0.1
NUP50-201ENST00000347635 P4HBP07237 508 aaKnown RBP15.71■□□□□ 0.1
NUP50-201ENST00000347635 GNAT1P11488 350 aa15.71■□□□□ 0.1
NUP50-201ENST00000347635 SKOR1P84550 965 aa15.71■□□□□ 0.1
NUP50-201ENST00000347635 MAP3K21Q5TCX8 1036 aa15.71■□□□□ 0.1
NUP50-201ENST00000347635 LDHDQ86WU2 507 aa15.71■□□□□ 0.1
NUP50-201ENST00000347635 TRIM4Q9C037 500 aa15.71■□□□□ 0.1
NUP50-201ENST00000347635 ZFP69BQ9UJL9 534 aa15.71■□□□□ 0.1
NUP50-201ENST00000347635 AKT3Q9Y243 479 aa15.71■□□□□ 0.1
NUP50-201ENST00000347635 MAD1L1Q9Y6D9 718 aa15.71■□□□□ 0.1
NUP50-201ENST00000347635 SNAPC2Q13487 334 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 SLFN12LQ6IEE8 588 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 CARD9Q9H257 536 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 SCOCQ9UIL1 159 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 IQANK1A0A1B0GTG1 560 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 OPHN1O60890 802 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 NDUFB10O96000 172 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 FAM153BP0C7A2 387 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 ELF1P32519 619 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 IGBP1P78318 339 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 TTLL4Q14679 1199 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 EPHA7Q15375 998 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 BBS9Q3SYG4 887 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 FAM153CQ494X1 144 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 BSPRYQ5W0U4 402 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 CYB5D1Q6P9G0 228 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 TSEN2Q8NCE0 465 aaKnown RBP15.7■□□□□ 0.1
NUP50-201ENST00000347635 FAM153AQ9UHL3 310 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 UBE4BO95155 1302 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 ZSCAN5CA6NGD5 496 aaPredicted RBP15.7■□□□□ 0.1
NUP50-201ENST00000347635 IPO5O00410 1097 aaKnown RBP15.7■□□□□ 0.1
NUP50-201ENST00000347635 NPEPPSP55786 919 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 MAP7D3Q8IWC1 876 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 MKNK1Q9BUB5 465 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 TEX13BQ9BXU2 312 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 ARHGEF37A1IGU5 675 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 MAP3K7O43318 606 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 ESRRAP11474 423 aaPredicted RBP15.7■□□□□ 0.1
NUP50-201ENST00000347635 TNFRSF8P28908 595 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 PSMC4P43686 418 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 ZC2HC1CQ53FD0 456 aaPredicted RBP15.7■□□□□ 0.1
NUP50-201ENST00000347635 IZUMO3Q5VZ72 239 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 SYT2Q8N9I0 419 aaPredicted RBP15.7■□□□□ 0.1
NUP50-201ENST00000347635 MMP19Q99542 508 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 REXO2Q9Y3B8 237 aaKnown RBP15.7■□□□□ 0.1
NUP50-201ENST00000347635 ALG6Q9Y672 507 aa15.7■□□□□ 0.1
NUP50-201ENST00000347635 KLRC4O43908 158 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 SLC29A2Q14542 456 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 ZNF571Q7Z3V5 609 aaPredicted RBP15.69■□□□□ 0.1
NUP50-201ENST00000347635 TRIM55Q9BYV6 548 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 ROPN1BQ9BZX4 212 aaPredicted RBP15.69■□□□□ 0.1
NUP50-201ENST00000347635 DEFB129Q9H1M3 183 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 ROPN1Q9HAT0 212 aaPredicted RBP15.69■□□□□ 0.1
NUP50-201ENST00000347635 SIK3Q9Y2K2 1263 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 LTN1O94822 1766 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 COL14A1Q05707 1796 aaKnown RBP15.69■□□□□ 0.1
NUP50-201ENST00000347635 RCCD1A6NED2 376 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 ITIH2P19823 946 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 STAT4Q14765 748 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 MIIPQ5JXC2 388 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 PDIK1LQ8N165 341 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 KCTD6Q8NC69 237 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 KCNV2Q8TDN2 545 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 C11orf70Q9BRQ4 267 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 UVRAGQ9P2Y5 699 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 BCAP29Q9UHQ4 241 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 A0A0G2JND7 137 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 MYBL2P10244 700 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 ARL4CP56559 192 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 TTMPQ5BVD1 217 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 PASD1Q8IV76 773 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 TEX2Q8IWB9 1127 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 SLC4A9Q96Q91 983 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 TRAIPQ9BWF2 469 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 PABPC3Q9H361 631 aaKnown RBP15.69■□□□□ 0.1
NUP50-201ENST00000347635 CES2O00748 559 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 PCGF5Q86SE9 256 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 RHOT1Q8IXI2 618 aa15.69■□□□□ 0.1
NUP50-201ENST00000347635 ADARB2Q9NS39 739 aaKnown RBP15.69■□□□□ 0.1
NUP50-201ENST00000347635 TPX2Q9ULW0 747 aaKnown RBP15.69■□□□□ 0.1
NUP50-201ENST00000347635 A0A0A6YYK5 440 aaPredicted RBP15.68■□□□□ 0.1
NUP50-201ENST00000347635 H0Y3Z8 333 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 CLDN3O15551 220 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 COMTP21964 271 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 HMGCS2P54868 508 aa15.68■□□□□ 0.1
NUP50-201ENST00000347635 SH3BGRP55822 239 aaPredicted RBP15.68■□□□□ 0.1
NUP50-201ENST00000347635 DARS2Q6PI48 645 aaKnown RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms