RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 MGAT5Q09328 741 aa19.08■□□□□ 0.65
VHL-202ENST00000345392 RPUSD2Q8IZ73 545 aaKnown RBP19.08■□□□□ 0.65
VHL-202ENST00000345392 C1orf54Q8WWF1 131 aa19.08■□□□□ 0.65
VHL-202ENST00000345392 OLFML3Q9NRN5 406 aa19.08■□□□□ 0.65
VHL-202ENST00000345392 FRMD4BQ9Y2L6 1034 aa19.08■□□□□ 0.65
VHL-202ENST00000345392 PASKQ96RG2 1323 aa19.08■□□□□ 0.64
VHL-202ENST00000345392 PPP1R12AO14974 1030 aaPredicted RBP19.08■□□□□ 0.64
VHL-202ENST00000345392 DLATP10515 647 aaKnown RBP19.08■□□□□ 0.64
VHL-202ENST00000345392 GBP1P32455 592 aa19.08■□□□□ 0.64
VHL-202ENST00000345392 GPC5P78333 572 aa19.08■□□□□ 0.64
VHL-202ENST00000345392 EN1Q05925 392 aaPredicted RBP19.08■□□□□ 0.64
VHL-202ENST00000345392 RRP1BQ14684 758 aaKnown RBP19.08■□□□□ 0.64
VHL-202ENST00000345392 KIF22Q14807 665 aa19.08■□□□□ 0.64
VHL-202ENST00000345392 TRIP13Q15645 432 aaPredicted RBP19.08■□□□□ 0.64
VHL-202ENST00000345392 C11orf63Q6NUN7 778 aa19.08■□□□□ 0.64
VHL-202ENST00000345392 DEFB132Q7Z7B7 95 aa19.08■□□□□ 0.64
VHL-202ENST00000345392 SLC13A5Q86YT5 568 aaPredicted RBP19.08■□□□□ 0.64
VHL-202ENST00000345392 TPH2Q8IWU9 490 aa19.08■□□□□ 0.64
VHL-202ENST00000345392 PWWP2AQ96N64 755 aa19.08■□□□□ 0.64
VHL-202ENST00000345392 RUNDC3BQ96NL0 473 aa19.08■□□□□ 0.64
VHL-202ENST00000345392 FAM167BQ9BTA0 163 aa19.08■□□□□ 0.64
VHL-202ENST00000345392 ROPN1BQ9BZX4 212 aaPredicted RBP19.08■□□□□ 0.64
VHL-202ENST00000345392 ROPN1Q9HAT0 212 aaPredicted RBP19.08■□□□□ 0.64
VHL-202ENST00000345392 TP73O15350 636 aa19.08■□□□□ 0.64
VHL-202ENST00000345392 CHMP2AO43633 222 aa19.08■□□□□ 0.64
VHL-202ENST00000345392 EYA4O95677 639 aa19.08■□□□□ 0.64
VHL-202ENST00000345392 EEF2P13639 858 aaKnown RBP19.08■□□□□ 0.64
VHL-202ENST00000345392 HOXA13P31271 388 aaPredicted RBP19.08■□□□□ 0.64
VHL-202ENST00000345392 KYNUQ16719 465 aa19.08■□□□□ 0.64
VHL-202ENST00000345392 CGB2Q6NT52 195 aa19.08■□□□□ 0.64
VHL-202ENST00000345392 CYP4X1Q8N118 509 aa19.08■□□□□ 0.64
VHL-202ENST00000345392 GBP7Q8N8V2 638 aaPredicted RBP19.08■□□□□ 0.64
VHL-202ENST00000345392 CRYGNQ8WXF5 182 aa19.08■□□□□ 0.64
VHL-202ENST00000345392 TGS1Q96RS0 853 aaKnown RBP19.08■□□□□ 0.64
VHL-202ENST00000345392 RXFP1Q9HBX9 757 aa19.08■□□□□ 0.64
VHL-202ENST00000345392 SLC26A4O43511 780 aa19.07■□□□□ 0.64
VHL-202ENST00000345392 SPOPO43791 374 aa19.07■□□□□ 0.64
VHL-202ENST00000345392 UPP2O95045 317 aa19.07■□□□□ 0.64
VHL-202ENST00000345392 GJB6O95452 261 aa19.07■□□□□ 0.64
VHL-202ENST00000345392 BRAFP15056 766 aa19.07■□□□□ 0.64
VHL-202ENST00000345392 DLG4P78352 724 aa19.07■□□□□ 0.64
VHL-202ENST00000345392 SATB1Q01826 763 aa19.07■□□□□ 0.64
VHL-202ENST00000345392 SIX1Q15475 284 aaPredicted RBP19.07■□□□□ 0.64
VHL-202ENST00000345392 ANKRD20A2Q5SQ80 823 aa19.07■□□□□ 0.64
VHL-202ENST00000345392 ANKRD20A1Q5TYW2 823 aa19.07■□□□□ 0.64
VHL-202ENST00000345392 ANKRD20A3Q5VUR7 823 aa19.07■□□□□ 0.64
VHL-202ENST00000345392 ASRGL1Q7L266 308 aa19.07■□□□□ 0.64
VHL-202ENST00000345392 ARHGEF19Q8IW93 802 aa19.07■□□□□ 0.64
VHL-202ENST00000345392 CKAP2Q8WWK9 683 aa19.07■□□□□ 0.64
VHL-202ENST00000345392 MTUS1Q9ULD2 1270 aa19.07■□□□□ 0.64
VHL-202ENST00000345392 GDF11O95390 407 aa19.07■□□□□ 0.64
VHL-202ENST00000345392 IKQ13123 557 aaPredicted RBP19.07■□□□□ 0.64
VHL-202ENST00000345392 RNF207Q6ZRF8 634 aa19.07■□□□□ 0.64
VHL-202ENST00000345392 MIGA2Q7L4E1 593 aa19.07■□□□□ 0.64
VHL-202ENST00000345392 SLC17A8Q8NDX2 589 aa19.07■□□□□ 0.64
VHL-202ENST00000345392 IFT74Q96LB3 600 aa19.07■□□□□ 0.64
VHL-202ENST00000345392 PCDHB18PQ96TA0 734 aa19.07■□□□□ 0.64
VHL-202ENST00000345392 AGPAT3Q9NRZ7 376 aa19.07■□□□□ 0.64
VHL-202ENST00000345392 VAV3Q9UKW4 847 aa19.07■□□□□ 0.64
VHL-202ENST00000345392 CLDN3O15551 220 aa19.06■□□□□ 0.64
VHL-202ENST00000345392 ECEL1O95672 775 aa19.06■□□□□ 0.64
VHL-202ENST00000345392 ATP2A2P16615 1042 aaKnown RBP19.06■□□□□ 0.64
VHL-202ENST00000345392 CYFIP1Q7L576 1253 aa19.06■□□□□ 0.64
VHL-202ENST00000345392 ANKLE1Q8NAG6 615 aa19.06■□□□□ 0.64
VHL-202ENST00000345392 KAT5Q92993 513 aa19.06■□□□□ 0.64
VHL-202ENST00000345392 KIF9Q9HAQ2 790 aa19.06■□□□□ 0.64
VHL-202ENST00000345392 ETNK1Q9HBU6 452 aa19.06■□□□□ 0.64
VHL-202ENST00000345392 PRKAG3Q9UGI9 489 aa19.06■□□□□ 0.64
VHL-202ENST00000345392 TAF1LQ8IZX4 1826 aa19.06■□□□□ 0.64
VHL-202ENST00000345392 EXOC3O60645 756 aa19.06■□□□□ 0.64
VHL-202ENST00000345392 STX2P32856 288 aa19.06■□□□□ 0.64
VHL-202ENST00000345392 LACTBP83111 547 aaPredicted RBP19.06■□□□□ 0.64
VHL-202ENST00000345392 ATP11AP98196 1134 aa19.06■□□□□ 0.64
VHL-202ENST00000345392 KRT17Q04695 432 aa19.06■□□□□ 0.64
VHL-202ENST00000345392 ZNF568Q3ZCX4 644 aa19.06■□□□□ 0.64
VHL-202ENST00000345392 Q4G0T1 1027 aa19.06■□□□□ 0.64
VHL-202ENST00000345392 CAPRIN2Q6IMN6 1127 aaKnown RBP19.06■□□□□ 0.64
VHL-202ENST00000345392 NSMFQ6X4W1 530 aa19.06■□□□□ 0.64
VHL-202ENST00000345392 FAM47EQ6ZV65 393 aa19.06■□□□□ 0.64
VHL-202ENST00000345392 TRMT10CQ7L0Y3 403 aaKnown RBP19.06■□□□□ 0.64
VHL-202ENST00000345392 HS2ST1Q7LGA3 356 aa19.06■□□□□ 0.64
VHL-202ENST00000345392 LMO3Q8TAP4 145 aa19.06■□□□□ 0.64
VHL-202ENST00000345392 SERPINB12Q96P63 405 aa19.06■□□□□ 0.64
VHL-202ENST00000345392 ASIC3Q9UHC3 531 aa19.06■□□□□ 0.64
VHL-202ENST00000345392 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.06■□□□□ 0.64
VHL-202ENST00000345392 PPEF1O14829 653 aaPredicted RBP19.05■□□□□ 0.64
VHL-202ENST00000345392 BBOX1O75936 387 aa19.05■□□□□ 0.64
VHL-202ENST00000345392 HADHBP55084 474 aaKnown RBP19.05■□□□□ 0.64
VHL-202ENST00000345392 ZNF622Q969S3 477 aaKnown RBP eCLIP19.05■□□□□ 0.64
VHL-202ENST00000345392 PCIF1Q9H4Z3 704 aa19.05■□□□□ 0.64
VHL-202ENST00000345392 PARVGQ9HBI0 331 aa19.05■□□□□ 0.64
VHL-202ENST00000345392 DDTLA6NHG4 134 aaPredicted RBP19.05■□□□□ 0.64
VHL-202ENST00000345392 EIF3DO15371 548 aaKnown RBP eCLIP19.05■□□□□ 0.64
VHL-202ENST00000345392 SGPL1O95470 568 aa19.05■□□□□ 0.64
VHL-202ENST00000345392 CETPP11597 493 aa19.05■□□□□ 0.64
VHL-202ENST00000345392 GAP43P17677 238 aa19.05■□□□□ 0.64
VHL-202ENST00000345392 VPS41P49754 854 aa19.05■□□□□ 0.64
VHL-202ENST00000345392 RNASELQ05823 741 aaKnown RBP19.05■□□□□ 0.64
VHL-202ENST00000345392 CYP1B1Q16678 543 aa19.05■□□□□ 0.64
VHL-202ENST00000345392 SLFN13Q68D06 897 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms