RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 PPTC7Q8NI37 304 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 POMGNT1Q8WZA1 660 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 DEF6Q9H4E7 631 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 FAM204AQ9H8W3 233 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 ARHGAP20Q9P2F6 1191 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 RSPH14Q9UHP6 348 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 TRPC6Q9Y210 931 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 MGAMO43451 1857 aa13.88□□□□□ -0.19
CLK3-201ENST00000345005 KIAA0391O15091 583 aaKnown RBP13.87□□□□□ -0.19
CLK3-201ENST00000345005 OPA1O60313 960 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 TRIM49P0CI25 452 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 TRIM49CP0CI26 452 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 ACTN1P12814 892 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 EIF4A3P38919 411 aaKnown RBP13.87□□□□□ -0.19
CLK3-201ENST00000345005 LIG4P49917 911 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 APLP1P51693 650 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 EFNA5P52803 228 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 GYS2P54840 703 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 ENPEPQ07075 957 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 SNRNP35Q16560 246 aaKnown RBP13.87□□□□□ -0.19
CLK3-201ENST00000345005 MORN1Q5T089 497 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 SLC39A4Q6P5W5 647 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 TAS1R3Q7RTX0 852 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 IFNL1Q8IU54 200 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 FBXL18Q96ME1 805 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 KIAA1586Q9HCI6 787 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 SIX2Q9NPC8 291 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 HPCAL4Q9UM19 191 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 IGKV6-21A0A0C4DH24 114 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 LRRIQ3A6PVS8 624 aaPredicted RBP13.87□□□□□ -0.19
CLK3-201ENST00000345005 ZBTB42B2RXF5 422 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 PMM2O15305 246 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 ADCY3O60266 1144 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 LCA5LO95447 670 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 PIGRP01833 764 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 ADCYAP1R1P41586 468 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 APBA1Q02410 837 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 MAP2K5Q13163 448 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 IRF5Q13568 498 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 ACVR2BQ13705 512 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 RAPGEF1Q13905 1077 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 TTC31Q49AM3 519 aaPredicted RBP13.87□□□□□ -0.19
CLK3-201ENST00000345005 DUSP28Q4G0W2 176 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 ZNF484Q5JVG2 852 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 SLFN12LQ6IEE8 588 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 LRRC31Q6UY01 552 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 CCNI2Q6ZMN8 369 aaPredicted RBP13.87□□□□□ -0.19
CLK3-201ENST00000345005 ZNF572Q7Z3I7 529 aaPredicted RBP13.87□□□□□ -0.19
CLK3-201ENST00000345005 GPD1LQ8N335 351 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 DNAJC5GQ8N7S2 189 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 NOA1Q8NC60 698 aaKnown RBP13.87□□□□□ -0.19
CLK3-201ENST00000345005 TRIM58Q8NG06 486 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 NPLOC4Q8TAT6 608 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 FAM76AQ8TAV0 307 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 TMC2Q8TDI7 906 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 PRPF31Q8WWY3 499 aaKnown RBP13.87□□□□□ -0.19
CLK3-201ENST00000345005 PSPC1Q8WXF1 523 aaKnown RBP13.87□□□□□ -0.19
CLK3-201ENST00000345005 JAKMIP2Q96AA8 810 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 MFSD14AQ96MC6 490 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 SPAG5Q96R06 1193 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 ZFYVE28Q9HCC9 887 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 REXO2Q9Y3B8 237 aaKnown RBP13.87□□□□□ -0.19
CLK3-201ENST00000345005 BZW2Q9Y6E2 419 aaKnown RBP13.87□□□□□ -0.19
CLK3-201ENST00000345005 TLL2Q9Y6L7 1015 aa13.87□□□□□ -0.19
CLK3-201ENST00000345005 GOLGA8IPA6NC78 632 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 GOLGA8JA6NMD2 632 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 GOLGA8KD6RF30 607 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 AKR1B10O60218 316 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 TLR2O60603 784 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 LGALS2P05162 132 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 PLEKP08567 350 aaPredicted RBP13.86□□□□□ -0.19
CLK3-201ENST00000345005 KIF11P52732 1056 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 SREBF2Q12772 1141 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 KIF5AQ12840 1032 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 ASIC2Q16515 512 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 CBWD6Q4V339 395 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 CBWD3Q5JTY5 395 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 CBWD5Q5RIA9 395 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 HGSNATQ68CP4 663 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 C17orf99Q6UX52 265 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 SPATS2Q86XZ4 545 aaKnown RBP13.86□□□□□ -0.19
CLK3-201ENST00000345005 FMNL3Q8IVF7 1028 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 MMGT1Q8N4V1 131 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 ZSWIM2Q8NEG5 633 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 CAGE1Q8TC20 777 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 AFG1LQ8WV93 481 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 SUGCTQ9HAC7 445 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 JRKLQ9Y4A0 524 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 STYXL1Q9Y6J8 313 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 MYH10P35580 1976 aa13.86□□□□□ -0.19
CLK3-201ENST00000345005 A0A087WUV0 522 aaPredicted RBP13.85□□□□□ -0.19
CLK3-201ENST00000345005 ASAP2O43150 1006 aa13.85□□□□□ -0.19
CLK3-201ENST00000345005 SHOX2O60902 331 aaPredicted RBP13.85□□□□□ -0.19
CLK3-201ENST00000345005 CPP00450 1065 aa13.85□□□□□ -0.19
CLK3-201ENST00000345005 ADRB2P07550 413 aa13.85□□□□□ -0.19
CLK3-201ENST00000345005 HOXC6P09630 235 aa13.85□□□□□ -0.19
CLK3-201ENST00000345005 RFX1P22670 979 aa13.85□□□□□ -0.19
CLK3-201ENST00000345005 DLG4P78352 724 aa13.85□□□□□ -0.19
CLK3-201ENST00000345005 LAMTOR4Q0VGL1 99 aa13.85□□□□□ -0.19
CLK3-201ENST00000345005 PPFIA1Q13136 1202 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms