RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 SLFN12LQ6IEE8 588 aa19.14■□□□□ 0.65
SMC4-201ENST00000344722 BTNL9Q6UXG8 535 aa19.14■□□□□ 0.65
SMC4-201ENST00000344722 JDP2Q8WYK2 163 aa19.14■□□□□ 0.65
SMC4-201ENST00000344722 DDX17Q92841 729 aaKnown RBP19.14■□□□□ 0.65
SMC4-201ENST00000344722 ATP6V1E2Q96A05 226 aa19.14■□□□□ 0.65
SMC4-201ENST00000344722 KIAA1586Q9HCI6 787 aa19.14■□□□□ 0.65
SMC4-201ENST00000344722 DMGDHQ9UI17 866 aaKnown RBP19.14■□□□□ 0.65
SMC4-201ENST00000344722 TAF6LQ9Y6J9 622 aa19.14■□□□□ 0.65
SMC4-201ENST00000344722 A2ML1A8K2U0 1454 aa19.14■□□□□ 0.65
SMC4-201ENST00000344722 MAP4P27816 1152 aaKnown RBP19.14■□□□□ 0.65
SMC4-201ENST00000344722 MDH1BQ5I0G3 518 aa19.14■□□□□ 0.65
SMC4-201ENST00000344722 RHPN2Q8IUC4 686 aa19.14■□□□□ 0.65
SMC4-201ENST00000344722 PBXIP1Q96AQ6 731 aa19.14■□□□□ 0.65
SMC4-201ENST00000344722 BMP3P12645 472 aa19.14■□□□□ 0.65
SMC4-201ENST00000344722 FIGNQ5HY92 759 aa19.14■□□□□ 0.65
SMC4-201ENST00000344722 LZTS1Q9Y250 596 aa19.14■□□□□ 0.65
SMC4-201ENST00000344722 INO80Q9ULG1 1556 aaPredicted RBP19.14■□□□□ 0.65
SMC4-201ENST00000344722 EFCAB6Q5THR3 1501 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 LDHAP00338 332 aaKnown RBP19.13■□□□□ 0.65
SMC4-201ENST00000344722 IL10P22301 178 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 RABL6Q3YEC7 729 aaPredicted RBP19.13■□□□□ 0.65
SMC4-201ENST00000344722 AENQ8WTP8 325 aaKnown RBP19.13■□□□□ 0.65
SMC4-201ENST00000344722 CMTM5Q96DZ9 223 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 NEU2Q9Y3R4 380 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 ZBTB5O15062 677 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 SMARCA1P28370 1054 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 TFAMQ00059 246 aaKnown RBP19.13■□□□□ 0.65
SMC4-201ENST00000344722 C9orf72Q96LT7 481 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 ACAP3Q96P50 834 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 LBHD1Q9BQE6 289 aaPredicted RBP19.13■□□□□ 0.65
SMC4-201ENST00000344722 ANGPTL3Q9Y5C1 460 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 KAT6BQ8WYB5 2073 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 HSPA13P48723 471 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 MIEF2Q96C03 454 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 PKD2L2Q9NZM6 624 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 CLDN3O15551 220 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 NMT2O60551 498 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 ARHGDIAP52565 204 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 ROR1Q01973 937 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 LVRNQ6Q4G3 990 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 C16orf89Q6UX73 402 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 ANKMY2Q8IV38 441 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 MFN1Q8IWA4 741 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 DDI1Q8WTU0 396 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 TMEM260Q9NX78 707 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 GTSE1Q9NYZ3 720 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 NXF1Q9UBU9 619 aaKnown RBP19.13■□□□□ 0.65
SMC4-201ENST00000344722 CAPN6Q9Y6Q1 641 aa19.13■□□□□ 0.65
SMC4-201ENST00000344722 PI4K2BG5E9Z4 385 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 HPS3Q969F9 1004 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 VPS39Q96JC1 886 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 ASCC2Q9H1I8 757 aaPredicted RBP19.12■□□□□ 0.65
SMC4-201ENST00000344722 MANSC1Q9H8J5 431 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 ZNF229Q9UJW7 825 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 PHTF1Q9UMS5 762 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 GOLGA8RI6L899 631 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 ERFP50548 548 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 PEX3P56589 373 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 TBX2Q13207 712 aaPredicted RBP19.12■□□□□ 0.65
SMC4-201ENST00000344722 CEP55Q53EZ4 464 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 MAP3K14Q99558 947 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 RXFP1Q9HBX9 757 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 MAGED2Q9UNF1 606 aaPredicted RBP19.12■□□□□ 0.65
SMC4-201ENST00000344722 STX3Q13277 289 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 SRBD1Q8N5C6 995 aaKnown RBP19.12■□□□□ 0.65
SMC4-201ENST00000344722 LZICQ8WZA0 190 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 DHX36Q9H2U1 1008 aaKnown RBP19.12■□□□□ 0.65
SMC4-201ENST00000344722 H3BRJ5 948 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 UBOX5O94941 541 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 APOA1P02647 267 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 KRT4P19013 534 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 MAGEA4P43358 317 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 PRELPP51888 382 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 ADRM1Q16186 407 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 CDKAL1Q5VV42 579 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 APEX2Q9UBZ4 518 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 HPS5Q9UPZ3 1129 aa19.12■□□□□ 0.65
SMC4-201ENST00000344722 SETBP1Q9Y6X0 1596 aa19.11■□□□□ 0.65
SMC4-201ENST00000344722 DAB1O75553 588 aa19.11■□□□□ 0.65
SMC4-201ENST00000344722 SCNN1DP51172 638 aa19.11■□□□□ 0.65
SMC4-201ENST00000344722 EZH2Q15910 746 aaKnown RBP19.11■□□□□ 0.65
SMC4-201ENST00000344722 EDRF1Q3B7T1 1238 aa19.11■□□□□ 0.65
SMC4-201ENST00000344722 PASD1Q8IV76 773 aa19.11■□□□□ 0.65
SMC4-201ENST00000344722 ACTRT1Q8TDG2 376 aa19.11■□□□□ 0.65
SMC4-201ENST00000344722 CCT7Q99832 543 aa19.11■□□□□ 0.65
SMC4-201ENST00000344722 HAO1Q9UJM8 370 aa19.11■□□□□ 0.65
SMC4-201ENST00000344722 USP17L5A8MUK1 530 aa19.11■□□□□ 0.65
SMC4-201ENST00000344722 SKAP2O75563 359 aaPredicted RBP19.11■□□□□ 0.65
SMC4-201ENST00000344722 CYP2D6P10635 497 aa19.11■□□□□ 0.65
SMC4-201ENST00000344722 CD44P16070 742 aaKnown RBP19.11■□□□□ 0.65
SMC4-201ENST00000344722 ZNF18P17022 549 aa19.11■□□□□ 0.65
SMC4-201ENST00000344722 TRPC1P48995 793 aa19.11■□□□□ 0.65
SMC4-201ENST00000344722 MIS18BP1Q6P0N0 1132 aa19.11■□□□□ 0.65
SMC4-201ENST00000344722 RCOR2Q8IZ40 523 aa19.11■□□□□ 0.65
SMC4-201ENST00000344722 FAM149B1Q96BN6 582 aa19.11■□□□□ 0.65
SMC4-201ENST00000344722 ETAA1Q9NY74 926 aa19.11■□□□□ 0.65
SMC4-201ENST00000344722 POTEFA5A3E0 1075 aa19.11■□□□□ 0.65
SMC4-201ENST00000344722 ADCY3O60266 1144 aa19.11■□□□□ 0.65
SMC4-201ENST00000344722 POTEIP0CG38 1075 aa19.11■□□□□ 0.65
SMC4-201ENST00000344722 SLC12A1Q13621 1099 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms