RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 ITIH4Q14624 930 aa24.84■■□□□ 1.57
NKX2-3-201ENST00000344586 SNCBQ16143 134 aa24.84■■□□□ 1.57
NKX2-3-201ENST00000344586 SLC47A2Q86VL8 602 aa24.84■■□□□ 1.57
NKX2-3-201ENST00000344586 CCDC105Q8IYK2 499 aa24.84■■□□□ 1.57
NKX2-3-201ENST00000344586 SEPT12Q8IYM1 358 aa24.84■■□□□ 1.57
NKX2-3-201ENST00000344586 ZNF564Q8TBZ8 553 aaPredicted RBP24.84■■□□□ 1.57
NKX2-3-201ENST00000344586 PRMT1Q99873 361 aaKnown RBP24.84■■□□□ 1.57
NKX2-3-201ENST00000344586 NUP85Q9BW27 656 aa24.84■■□□□ 1.57
NKX2-3-201ENST00000344586 LARSQ9P2J5 1176 aaKnown RBP24.84■■□□□ 1.57
NKX2-3-201ENST00000344586 MTUS1Q9ULD2 1270 aa24.84■■□□□ 1.57
NKX2-3-201ENST00000344586 USP20Q9Y2K6 914 aa24.84■■□□□ 1.57
NKX2-3-201ENST00000344586 TMX2Q9Y320 296 aa24.84■■□□□ 1.57
NKX2-3-201ENST00000344586 MRPL11Q9Y3B7 192 aaKnown RBP24.84■■□□□ 1.57
NKX2-3-201ENST00000344586 PPIP5K2O43314 1243 aa24.83■■□□□ 1.57
NKX2-3-201ENST00000344586 CYP1A2P05177 515 aa24.83■■□□□ 1.57
NKX2-3-201ENST00000344586 MXI1P50539 228 aa24.83■■□□□ 1.57
NKX2-3-201ENST00000344586 FMO1Q01740 532 aa24.83■■□□□ 1.57
NKX2-3-201ENST00000344586 AUHQ13825 339 aaKnown RBP24.83■■□□□ 1.57
NKX2-3-201ENST00000344586 CYFIP1Q7L576 1253 aa24.83■■□□□ 1.57
NKX2-3-201ENST00000344586 C12orf50Q8NA57 414 aaPredicted RBP24.83■■□□□ 1.57
NKX2-3-201ENST00000344586 XXYLT1Q8NBI6 393 aa24.83■■□□□ 1.57
NKX2-3-201ENST00000344586 RUNDC3BQ96NL0 473 aa24.83■■□□□ 1.57
NKX2-3-201ENST00000344586 MYCBPQ99417 103 aaPredicted RBP24.83■■□□□ 1.57
NKX2-3-201ENST00000344586 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.83■■□□□ 1.573e-10■■■■■ 153.8
NKX2-3-201ENST00000344586 PASKQ96RG2 1323 aa24.83■■□□□ 1.57
NKX2-3-201ENST00000344586 CYP26A1O43174 497 aa24.82■■□□□ 1.56
NKX2-3-201ENST00000344586 SPOPO43791 374 aa24.82■■□□□ 1.56
NKX2-3-201ENST00000344586 RASA3Q14644 834 aa24.82■■□□□ 1.56
NKX2-3-201ENST00000344586 FAM228AQ86W67 206 aa24.82■■□□□ 1.56
NKX2-3-201ENST00000344586 MXRA8Q9BRK3 442 aa24.82■■□□□ 1.56
NKX2-3-201ENST00000344586 RASGRF2O14827 1237 aa24.82■■□□□ 1.56
NKX2-3-201ENST00000344586 ITGB5P18084 799 aa24.82■■□□□ 1.56
NKX2-3-201ENST00000344586 PDE6BP35913 854 aa24.82■■□□□ 1.56
NKX2-3-201ENST00000344586 KCNJ1P48048 391 aa24.82■■□□□ 1.56
NKX2-3-201ENST00000344586 ZNF568Q3ZCX4 644 aa24.82■■□□□ 1.56
NKX2-3-201ENST00000344586 MFSD5Q6N075 450 aa24.82■■□□□ 1.56
NKX2-3-201ENST00000344586 ANKS4BQ8N8V4 417 aa24.82■■□□□ 1.56
NKX2-3-201ENST00000344586 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.82■■□□□ 1.56
NKX2-3-201ENST00000344586 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.82■■□□□ 1.56
NKX2-3-201ENST00000344586 PKD2L1Q9P0L9 805 aa24.82■■□□□ 1.56
NKX2-3-201ENST00000344586 TPX2Q9ULW0 747 aaKnown RBP24.82■■□□□ 1.56
NKX2-3-201ENST00000344586 PMM2O15305 246 aa24.81■■□□□ 1.56
NKX2-3-201ENST00000344586 ADRB2P07550 413 aa24.81■■□□□ 1.56
NKX2-3-201ENST00000344586 PLS3P13797 630 aa24.81■■□□□ 1.56
NKX2-3-201ENST00000344586 PREPLQ4J6C6 727 aaPredicted RBP24.81■■□□□ 1.56
NKX2-3-201ENST00000344586 MIER3Q7Z3K6 550 aa24.81■■□□□ 1.56
NKX2-3-201ENST00000344586 STMN4Q9H169 189 aaPredicted RBP24.81■■□□□ 1.56
NKX2-3-201ENST00000344586 TAOK3Q9H2K8 898 aa24.81■■□□□ 1.56
NKX2-3-201ENST00000344586 MAPK13O15264 365 aa24.81■■□□□ 1.56
NKX2-3-201ENST00000344586 ONECUT3O60422 494 aaPredicted RBP24.81■■□□□ 1.56
NKX2-3-201ENST00000344586 MAP2K2P36507 400 aa24.81■■□□□ 1.56
NKX2-3-201ENST00000344586 CNGA2Q16280 664 aa24.81■■□□□ 1.56
NKX2-3-201ENST00000344586 RNF207Q6ZRF8 634 aa24.81■■□□□ 1.56
NKX2-3-201ENST00000344586 SHC3Q92529 594 aa24.81■■□□□ 1.56
NKX2-3-201ENST00000344586 ZNF653Q96CK0 615 aa24.81■■□□□ 1.56
NKX2-3-201ENST00000344586 PRMT6Q96LA8 375 aaPredicted RBP24.81■■□□□ 1.56
NKX2-3-201ENST00000344586 GTF3C4Q9UKN8 822 aa24.81■■□□□ 1.56
NKX2-3-201ENST00000344586 SLC12A4Q9UP95 1085 aa24.81■■□□□ 1.56
NKX2-3-201ENST00000344586 TP73O15350 636 aa24.8■■□□□ 1.56
NKX2-3-201ENST00000344586 RDXP35241 583 aaKnown RBP24.8■■□□□ 1.56
NKX2-3-201ENST00000344586 GRIPAP1Q4V328 841 aa24.8■■□□□ 1.56
NKX2-3-201ENST00000344586 CCDC50Q8IVM0 306 aa24.8■■□□□ 1.56
NKX2-3-201ENST00000344586 PPM1KQ8N3J5 372 aa24.8■■□□□ 1.56
NKX2-3-201ENST00000344586 PSPC1Q8WXF1 523 aaKnown RBP24.8■■□□□ 1.56
NKX2-3-201ENST00000344586 SEMA4DQ92854 862 aa24.8■■□□□ 1.56
NKX2-3-201ENST00000344586 LRRC19Q9H756 370 aa24.8■■□□□ 1.56
NKX2-3-201ENST00000344586 HERC5Q9UII4 1024 aaKnown RBP24.8■■□□□ 1.56
NKX2-3-201ENST00000344586 DBR1Q9UK59 544 aaKnown RBP24.8■■□□□ 1.56
NKX2-3-201ENST00000344586 ECEL1O95672 775 aa24.79■■□□□ 1.56
NKX2-3-201ENST00000344586 P4HBP07237 508 aaKnown RBP24.79■■□□□ 1.56
NKX2-3-201ENST00000344586 RARRES1P49788 294 aa24.79■■□□□ 1.56
NKX2-3-201ENST00000344586 SF3A3Q12874 501 aaKnown RBP eCLIP24.79■■□□□ 1.56
NKX2-3-201ENST00000344586 CCDC38Q502W7 563 aa24.79■■□□□ 1.56
NKX2-3-201ENST00000344586 MIGA2Q7L4E1 593 aa24.79■■□□□ 1.56
NKX2-3-201ENST00000344586 POP1Q99575 1024 aaKnown RBP24.79■■□□□ 1.56
NKX2-3-201ENST00000344586 SAMD15Q9P1V8 674 aa24.79■■□□□ 1.56
NKX2-3-201ENST00000344586 ZHX2Q9Y6X8 837 aa24.79■■□□□ 1.56
NKX2-3-201ENST00000344586 DLATP10515 647 aaKnown RBP24.79■■□□□ 1.56
NKX2-3-201ENST00000344586 IFNAR2P48551 515 aa24.79■■□□□ 1.56
NKX2-3-201ENST00000344586 RWDD2BP57060 319 aa24.79■■□□□ 1.56
NKX2-3-201ENST00000344586 GTF2BQ00403 316 aa24.79■■□□□ 1.56
NKX2-3-201ENST00000344586 MAP2K1Q02750 393 aaPredicted RBP24.79■■□□□ 1.56
NKX2-3-201ENST00000344586 WLSQ5T9L3 541 aa24.79■■□□□ 1.56
NKX2-3-201ENST00000344586 CC2D2BQ6DHV5 1058 aa24.79■■□□□ 1.56
NKX2-3-201ENST00000344586 CCDC25Q86WR0 208 aa24.79■■□□□ 1.56
NKX2-3-201ENST00000344586 CHURC1Q8WUH1 139 aa24.79■■□□□ 1.56
NKX2-3-201ENST00000344586 ZNF622Q969S3 477 aaKnown RBP eCLIP24.79■■□□□ 1.56
NKX2-3-201ENST00000344586 ELAC2Q9BQ52 826 aaKnown RBP24.79■■□□□ 1.56
NKX2-3-201ENST00000344586 DDX23Q9BUQ8 820 aaKnown RBP24.79■■□□□ 1.56
NKX2-3-201ENST00000344586 AAASQ9NRG9 546 aa24.79■■□□□ 1.56
NKX2-3-201ENST00000344586 UVRAGQ9P2Y5 699 aa24.79■■□□□ 1.56
NKX2-3-201ENST00000344586 GOLGA8IPA6NC78 632 aa24.78■■□□□ 1.56
NKX2-3-201ENST00000344586 GOLGA8JA6NMD2 632 aa24.78■■□□□ 1.56
NKX2-3-201ENST00000344586 MGRN1O60291 552 aa24.78■■□□□ 1.56
NKX2-3-201ENST00000344586 GSTA1P08263 222 aa24.78■■□□□ 1.56
NKX2-3-201ENST00000344586 VIMP08670 466 aaKnown RBP24.78■■□□□ 1.56
NKX2-3-201ENST00000344586 NSMFQ6X4W1 530 aa24.78■■□□□ 1.56
NKX2-3-201ENST00000344586 TRMT10CQ7L0Y3 403 aaKnown RBP24.78■■□□□ 1.56
NKX2-3-201ENST00000344586 TAOK1Q7L7X3 1001 aa24.78■■□□□ 1.56
NKX2-3-201ENST00000344586 HAUS6Q7Z4H7 955 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms