RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 BSDC1Q9NW68 430 aaPredicted RBP16.32■□□□□ 0.2
SNX18-202ENST00000343017 NMRK1Q9NWW6 199 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 NKIRAS1Q9NYS0 192 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 USP17L15C9J2P7 530 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 USP17L13C9JLJ4 530 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 USP17L11C9JVI0 530 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 USP17L18D6R9N7 530 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 USP17L22D6RA61 530 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 USP17L17D6RBQ6 530 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 USP17L19D6RCP7 530 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 USP17L20D6RJB6 530 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 NPTXRO95502 500 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 USP17L24Q0WX57 530 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 TBC1D25Q3MII6 688 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 TTBK2Q6IQ55 1244 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 USP17L6PQ6QN14 398 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 C9orf72Q96LT7 481 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 RUNDC3BQ96NL0 473 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 PCMTD2Q9NV79 361 aa16.32■□□□□ 0.2
SNX18-202ENST00000343017 G3BP2Q9UN86 482 aaKnown RBP16.32■□□□□ 0.2
SNX18-202ENST00000343017 AHDC1Q5TGY3 1603 aaPredicted RBP16.31■□□□□ 0.2
SNX18-202ENST00000343017 ALDH3A1P30838 453 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 POLGP54098 1239 aaPredicted RBP16.31■□□□□ 0.2
SNX18-202ENST00000343017 CYP4A11Q02928 519 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 VPS72Q15906 364 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 SLC30A10Q6XR72 485 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 PPP4R3CPQ6ZMV5 832 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 KIAA0825Q8IV33 1275 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 DDX50Q9BQ39 737 aaKnown RBP16.31■□□□□ 0.2
SNX18-202ENST00000343017 TAOK3Q9H2K8 898 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 NUMBLQ9Y6R0 609 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 ANKRD62A6NC57 917 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 CLDN3O15551 220 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 THAP12O43422 761 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 RNF8O76064 485 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 HSPA1LP34931 641 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 KRT17Q04695 432 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 RCN2Q14257 317 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 SLC5A9Q2M3M2 681 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 PARP6Q2NL67 630 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 ZNF568Q3ZCX4 644 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 PARP10Q53GL7 1025 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 TMEM63BQ5T3F8 832 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 OR52E8Q6IFG1 317 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 MIGA2Q7L4E1 593 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 CCNJLQ8IV13 435 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 UBL4BQ8N7F7 174 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 SYT11Q9BT88 431 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 TRIM4Q9C037 500 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 DNAJC18Q9H819 358 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 PHTF1Q9UMS5 762 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 ANKRD36CQ5JPF3 1778 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 DOT1LQ8TEK3 1739 aa16.31■□□□□ 0.2
SNX18-202ENST00000343017 SYNGAP1Q96PV0 1343 aa16.3■□□□□ 0.2
SNX18-202ENST00000343017 PASKQ96RG2 1323 aa16.3■□□□□ 0.2
SNX18-202ENST00000343017 GCLCP48506 637 aaPredicted RBP16.3■□□□□ 0.2
SNX18-202ENST00000343017 SIX1Q15475 284 aaPredicted RBP16.3■□□□□ 0.2
SNX18-202ENST00000343017 HP1BP3Q5SSJ5 553 aaPredicted RBP16.3■□□□□ 0.2
SNX18-202ENST00000343017 SEL1L2Q5TEA6 688 aa16.3■□□□□ 0.2
SNX18-202ENST00000343017 NSMFQ6X4W1 530 aa16.3■□□□□ 0.2
SNX18-202ENST00000343017 TRMT10CQ7L0Y3 403 aaKnown RBP16.3■□□□□ 0.2
SNX18-202ENST00000343017 CATSPER3Q86XQ3 398 aa16.3■□□□□ 0.2
SNX18-202ENST00000343017 SLC13A5Q86YT5 568 aaPredicted RBP16.3■□□□□ 0.2
SNX18-202ENST00000343017 DTX3LQ8TDB6 740 aa16.3■□□□□ 0.2
SNX18-202ENST00000343017 NRG4Q8WWG1 115 aa16.3■□□□□ 0.2
SNX18-202ENST00000343017 STK33Q9BYT3 514 aa16.3■□□□□ 0.2
SNX18-202ENST00000343017 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.3■□□□□ 0.2
SNX18-202ENST00000343017 FAM196BA6NMK8 535 aa16.3■□□□□ 0.2
SNX18-202ENST00000343017 CALUO43852 315 aaPredicted RBP16.3■□□□□ 0.2
SNX18-202ENST00000343017 TTC4O95801 387 aa16.3■□□□□ 0.2
SNX18-202ENST00000343017 TTLL1O95922 423 aa16.3■□□□□ 0.2
SNX18-202ENST00000343017 SKIV2L2P42285 1042 aaKnown RBP16.3■□□□□ 0.2
SNX18-202ENST00000343017 TMED2Q15363 201 aa16.3■□□□□ 0.2
SNX18-202ENST00000343017 DSTYKQ6XUX3 929 aa16.3■□□□□ 0.2
SNX18-202ENST00000343017 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.3■□□□□ 0.2
SNX18-202ENST00000343017 AGGF1Q8N302 714 aaeCLIP16.3■□□□□ 0.2
SNX18-202ENST00000343017 EZH1Q92800 747 aaPredicted RBP16.3■□□□□ 0.2
SNX18-202ENST00000343017 SETDB2Q96T68 719 aa16.3■□□□□ 0.2
SNX18-202ENST00000343017 RIOX1Q9H6W3 641 aa16.3■□□□□ 0.2
SNX18-202ENST00000343017 KIAA1551Q9HCM1 1747 aa16.3■□□□□ 0.2
SNX18-202ENST00000343017 ESYT2A0FGR8 921 aa16.3■□□□□ 0.2
SNX18-202ENST00000343017 ECEL1O95672 775 aa16.3■□□□□ 0.2
SNX18-202ENST00000343017 ORC2Q13416 577 aaPredicted RBP16.3■□□□□ 0.2
SNX18-202ENST00000343017 TSNAXIP1Q2TAA8 658 aa16.3■□□□□ 0.2
SNX18-202ENST00000343017 RNF207Q6ZRF8 634 aa16.3■□□□□ 0.2
SNX18-202ENST00000343017 EPM2AIP1Q7L775 607 aaPredicted RBP16.3■□□□□ 0.2
SNX18-202ENST00000343017 GRID1Q9ULK0 1009 aa16.3■□□□□ 0.2
SNX18-202ENST00000343017 RASA4BC9J798 803 aa16.29■□□□□ 0.2
SNX18-202ENST00000343017 NVLO15381 856 aaKnown RBP16.29■□□□□ 0.2
SNX18-202ENST00000343017 TGFB1I1O43294 461 aa16.29■□□□□ 0.2
SNX18-202ENST00000343017 RASA4O43374 803 aa16.29■□□□□ 0.2
SNX18-202ENST00000343017 CNGA1P29973 690 aa16.29■□□□□ 0.2
SNX18-202ENST00000343017 NMT1P30419 496 aaKnown RBP16.29■□□□□ 0.2
SNX18-202ENST00000343017 RANBP1P43487 201 aa16.29■□□□□ 0.2
SNX18-202ENST00000343017 ITGA8P53708 1063 aa16.29■□□□□ 0.2
SNX18-202ENST00000343017 USP4Q13107 963 aa16.29■□□□□ 0.2
SNX18-202ENST00000343017 MTHFD1LQ6UB35 978 aa16.29■□□□□ 0.2
SNX18-202ENST00000343017 ARHGEF18Q6ZSZ5 1173 aa16.29■□□□□ 0.2
SNX18-202ENST00000343017 RFX8Q6ZV50 586 aa16.29■□□□□ 0.2
SNX18-202ENST00000343017 FAM186BQ8IYM0 893 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms