RNA–Protein interactions for RNA: ENST00000342644.9

SNX21-201, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best) BASIC

Gene SNX21, Length 1,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-201ENST00000342644 WNT8AQ9H1J5 351 aa22.55■■□□□ 1.2
SNX21-201ENST00000342644 AGO2Q9UKV8 859 aaKnown RBP22.55■■□□□ 1.2
SNX21-201ENST00000342644 PIN4Q9Y237 131 aaKnown RBP22.55■■□□□ 1.2
SNX21-201ENST00000342644 CXCL10P02778 98 aa22.54■■□□□ 1.2
SNX21-201ENST00000342644 MARSP56192 900 aaKnown RBP22.54■■□□□ 1.2
SNX21-201ENST00000342644 NFX1Q12986 1120 aaKnown RBP22.54■■□□□ 1.2
SNX21-201ENST00000342644 DCAF4L1Q3SXM0 396 aa22.54■■□□□ 1.2
SNX21-201ENST00000342644 ZNF568Q3ZCX4 644 aa22.54■■□□□ 1.2
SNX21-201ENST00000342644 SLC27A1Q6PCB7 646 aa22.54■■□□□ 1.2
SNX21-201ENST00000342644 GPD1LQ8N335 351 aa22.54■■□□□ 1.2
SNX21-201ENST00000342644 TRAIPQ9BWF2 469 aa22.54■■□□□ 1.2
SNX21-201ENST00000342644 CDT1Q9H211 546 aa22.54■■□□□ 1.2
SNX21-201ENST00000342644 PCIF1Q9H4Z3 704 aa22.54■■□□□ 1.2
SNX21-201ENST00000342644 ANKFY1Q9P2R3 1169 aa22.54■■□□□ 1.2
SNX21-201ENST00000342644 OGTO15294 1046 aa22.53■■□□□ 1.2
SNX21-201ENST00000342644 EXTL3O43909 919 aa22.53■■□□□ 1.2
SNX21-201ENST00000342644 FAM189A1O60320 539 aa22.53■■□□□ 1.2
SNX21-201ENST00000342644 EXOC3O60645 756 aa22.53■■□□□ 1.2
SNX21-201ENST00000342644 NBNO60934 754 aa22.53■■□□□ 1.2
SNX21-201ENST00000342644 TIMP1P01033 207 aa22.53■■□□□ 1.2
SNX21-201ENST00000342644 RFC2P35250 354 aa22.53■■□□□ 1.2
SNX21-201ENST00000342644 PSMC2P35998 433 aaKnown RBP22.53■■□□□ 1.2
SNX21-201ENST00000342644 CYP2J2P51589 502 aa22.53■■□□□ 1.2
SNX21-201ENST00000342644 MCCD1P59942 119 aaPredicted RBP22.53■■□□□ 1.2
SNX21-201ENST00000342644 POU5F1Q01860 360 aaKnown RBP22.53■■□□□ 1.2
SNX21-201ENST00000342644 KYAT1Q16773 422 aa22.53■■□□□ 1.2
SNX21-201ENST00000342644 MSTO1Q9BUK6 570 aa22.53■■□□□ 1.2
SNX21-201ENST00000342644 IFIH1Q9BYX4 1025 aaKnown RBP22.53■■□□□ 1.2
SNX21-201ENST00000342644 PPP1R12CQ9BZL4 782 aa22.53■■□□□ 1.2
SNX21-201ENST00000342644 FRMD4BQ9Y2L6 1034 aa22.53■■□□□ 1.2
SNX21-201ENST00000342644 AKAP3O75969 853 aa22.52■■□□□ 1.2
SNX21-201ENST00000342644 EEF1GP26641 437 aaKnown RBP22.52■■□□□ 1.2
SNX21-201ENST00000342644 CYP2C18P33260 490 aa22.52■■□□□ 1.2
SNX21-201ENST00000342644 SPAG1Q07617 926 aa22.52■■□□□ 1.2
SNX21-201ENST00000342644 DSC3Q14574 896 aa22.52■■□□□ 1.2
SNX21-201ENST00000342644 PLEKHG4Q58EX7 1191 aa22.52■■□□□ 1.2
SNX21-201ENST00000342644 EEF2KMTQ96G04 330 aa22.52■■□□□ 1.2
SNX21-201ENST00000342644 HTATIP2Q9BUP3 242 aa22.52■■□□□ 1.2
SNX21-201ENST00000342644 TRIM43BA6NCK2 446 aa22.52■■□□□ 1.19
SNX21-201ENST00000342644 ZSCAN20P17040 1043 aaPredicted RBP22.52■■□□□ 1.19
SNX21-201ENST00000342644 MATR3P43243 847 aaKnown RBP eCLIP22.52■■□□□ 1.19
SNX21-201ENST00000342644 CASP4P49662 377 aa22.52■■□□□ 1.19
SNX21-201ENST00000342644 CEP135Q66GS9 1140 aa22.52■■□□□ 1.19
SNX21-201ENST00000342644 FRMD5Q7Z6J6 570 aa22.52■■□□□ 1.19
SNX21-201ENST00000342644 CDR2LQ86X02 465 aaPredicted RBP22.52■■□□□ 1.19
SNX21-201ENST00000342644 APBB2Q92870 758 aa22.52■■□□□ 1.19
SNX21-201ENST00000342644 TRIM43Q96BQ3 446 aaPredicted RBP22.52■■□□□ 1.19
SNX21-201ENST00000342644 BORCS6Q96GS4 357 aa22.52■■□□□ 1.19
SNX21-201ENST00000342644 FTHL17Q9BXU8 183 aa22.52■■□□□ 1.19
SNX21-201ENST00000342644 TMX1Q9H3N1 280 aa22.52■■□□□ 1.19
SNX21-201ENST00000342644 METTL14Q9HCE5 456 aaKnown RBP22.52■■□□□ 1.19
SNX21-201ENST00000342644 CCDC85CA6NKD9 419 aa22.51■■□□□ 1.19
SNX21-201ENST00000342644 EPB41P11171 864 aaKnown RBP22.51■■□□□ 1.19
SNX21-201ENST00000342644 CCL23P55773 120 aa22.51■■□□□ 1.19
SNX21-201ENST00000342644 ENPEPQ07075 957 aa22.51■■□□□ 1.19
SNX21-201ENST00000342644 TCP11X2Q5H9J9 407 aa22.51■■□□□ 1.19
SNX21-201ENST00000342644 UBXN11Q5T124 520 aa22.51■■□□□ 1.19
SNX21-201ENST00000342644 CRELD2Q6UXH1 353 aaPredicted RBP22.51■■□□□ 1.19
SNX21-201ENST00000342644 ZBTB33Q86T24 672 aa22.51■■□□□ 1.19
SNX21-201ENST00000342644 TNS4Q8IZW8 715 aa22.51■■□□□ 1.19
SNX21-201ENST00000342644 CNOT6LQ96LI5 555 aaKnown RBP22.51■■□□□ 1.19
SNX21-201ENST00000342644 MAGEC2Q9UBF1 373 aaPredicted RBP22.51■■□□□ 1.19
SNX21-201ENST00000342644 MKI67P46013 3256 aaKnown RBP22.5■■□□□ 1.19
SNX21-201ENST00000342644 LRRC10BA6NIK2 292 aa22.5■■□□□ 1.19
SNX21-201ENST00000342644 ZNF233A6NK53 670 aa22.5■■□□□ 1.19
SNX21-201ENST00000342644 SNRNP35Q16560 246 aaKnown RBP22.5■■□□□ 1.19
SNX21-201ENST00000342644 TWF2Q6IBS0 349 aaKnown RBP22.5■■□□□ 1.19
SNX21-201ENST00000342644 FAM186BQ8IYM0 893 aa22.5■■□□□ 1.19
SNX21-201ENST00000342644 ZSWIM2Q8NEG5 633 aa22.5■■□□□ 1.19
SNX21-201ENST00000342644 SAAL1Q96ER3 474 aa22.5■■□□□ 1.19
SNX21-201ENST00000342644 SCLYQ96I15 445 aa22.5■■□□□ 1.19
SNX21-201ENST00000342644 PPP1R9BQ96SB3 815 aa22.5■■□□□ 1.19
SNX21-201ENST00000342644 CPSF3Q9UKF6 684 aaKnown RBP22.5■■□□□ 1.19
SNX21-201ENST00000342644 KCNJ18B7U540 433 aa22.49■■□□□ 1.19
SNX21-201ENST00000342644 RAG1P15918 1043 aa22.49■■□□□ 1.19
SNX21-201ENST00000342644 CDK11BP21127 795 aaKnown RBP22.49■■□□□ 1.19
SNX21-201ENST00000342644 GRM5P41594 1212 aa22.49■■□□□ 1.19
SNX21-201ENST00000342644 KCNJ12Q14500 433 aa22.49■■□□□ 1.19
SNX21-201ENST00000342644 MFSD5Q6N075 450 aa22.49■■□□□ 1.19
SNX21-201ENST00000342644 INTS8Q75QN2 995 aaKnown RBP22.49■■□□□ 1.19
SNX21-201ENST00000342644 CBWD2Q8IUF1 395 aa22.49■■□□□ 1.19
SNX21-201ENST00000342644 SEPT8Q92599 483 aa22.49■■□□□ 1.19
SNX21-201ENST00000342644 TRIM44Q96DX7 344 aaPredicted RBP22.49■■□□□ 1.19
SNX21-201ENST00000342644 MFSD14AQ96MC6 490 aa22.49■■□□□ 1.19
SNX21-201ENST00000342644 FAM213AQ9BRX8 229 aa22.49■■□□□ 1.19
SNX21-201ENST00000342644 EIF2AQ9BY44 585 aaKnown RBP22.49■■□□□ 1.19
SNX21-201ENST00000342644 PRDM5Q9NQX1 630 aaPredicted RBP22.49■■□□□ 1.19
SNX21-201ENST00000342644 ARMCX3Q9UH62 379 aaPredicted RBP22.49■■□□□ 1.19
SNX21-201ENST00000342644 LIMA1Q9UHB6 759 aaKnown RBP22.49■■□□□ 1.19
SNX21-201ENST00000342644 SCN5AQ14524 2016 aa22.49■■□□□ 1.19
SNX21-201ENST00000342644 GOLGA8IPA6NC78 632 aa22.48■■□□□ 1.19
SNX21-201ENST00000342644 GOLGA8JA6NMD2 632 aa22.48■■□□□ 1.19
SNX21-201ENST00000342644 ZNF623O75123 536 aa22.48■■□□□ 1.19
SNX21-201ENST00000342644 NPTXRO95502 500 aa22.48■■□□□ 1.19
SNX21-201ENST00000342644 ATP1A3P13637 1013 aa22.48■■□□□ 1.19
SNX21-201ENST00000342644 ITGB8P26012 769 aa22.48■■□□□ 1.19
SNX21-201ENST00000342644 CCDC40Q4G0X9 1142 aa22.48■■□□□ 1.19
SNX21-201ENST00000342644 ANKRD20A12PQ8NF67 263 aa22.48■■□□□ 1.19
SNX21-201ENST00000342644 DBF4BQ8NFT6 615 aa22.48■■□□□ 1.19
SNX21-201ENST00000342644 TRIM6Q9C030 488 aaPredicted RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms