RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 PDZD7Q9H5P4 517 aa17.84■□□□□ 0.45
SNED1-202ENST00000342631 ARMCX3Q9UH62 379 aaPredicted RBP17.84■□□□□ 0.45
SNED1-202ENST00000342631 BRCA2P51587 3418 aa17.83■□□□□ 0.45
SNED1-202ENST00000342631 OGTO15294 1046 aa17.83■□□□□ 0.44
SNED1-202ENST00000342631 TPM2P07951 284 aa17.83■□□□□ 0.44
SNED1-202ENST00000342631 MCCD1P59942 119 aaPredicted RBP17.83■□□□□ 0.44
SNED1-202ENST00000342631 SLC27A1Q6PCB7 646 aa17.83■□□□□ 0.44
SNED1-202ENST00000342631 INTS8Q75QN2 995 aaKnown RBP17.83■□□□□ 0.44
SNED1-202ENST00000342631 USP37Q86T82 979 aa17.83■□□□□ 0.44
SNED1-202ENST00000342631 FAM186BQ8IYM0 893 aa17.83■□□□□ 0.44
SNED1-202ENST00000342631 EEF2KMTQ96G04 330 aa17.83■□□□□ 0.44
SNED1-202ENST00000342631 ZBTB45Q96K62 511 aaPredicted RBP17.83■□□□□ 0.44
SNED1-202ENST00000342631 NOC4LQ9BVI4 516 aaKnown RBP17.83■□□□□ 0.44
SNED1-202ENST00000342631 ATP11BQ9Y2G3 1177 aa17.83■□□□□ 0.44
SNED1-202ENST00000342631 ATP1A3P13637 1013 aa17.82■□□□□ 0.44
SNED1-202ENST00000342631 EN2P19622 333 aaPredicted RBP17.82■□□□□ 0.44
SNED1-202ENST00000342631 PAK2Q13177 524 aa17.82■□□□□ 0.44
SNED1-202ENST00000342631 LPIN1Q14693 890 aa17.82■□□□□ 0.44
SNED1-202ENST00000342631 SNRNP35Q16560 246 aaKnown RBP17.82■□□□□ 0.44
SNED1-202ENST00000342631 LRRC26Q2I0M4 334 aa17.82■□□□□ 0.44
SNED1-202ENST00000342631 HIPK3Q9H422 1215 aa17.82■□□□□ 0.44
SNED1-202ENST00000342631 ERVK-5Q9HDB9 667 aa17.82■□□□□ 0.44
SNED1-202ENST00000342631 ST3GAL5Q9UNP4 418 aa17.82■□□□□ 0.44
SNED1-202ENST00000342631 USP20Q9Y2K6 914 aa17.82■□□□□ 0.44
SNED1-202ENST00000342631 ZNF233A6NK53 670 aa17.82■□□□□ 0.44
SNED1-202ENST00000342631 SERPINC1P01008 464 aa17.82■□□□□ 0.44
SNED1-202ENST00000342631 CLTBP09497 229 aa17.82■□□□□ 0.44
SNED1-202ENST00000342631 FGFR4P22455 802 aa17.82■□□□□ 0.44
SNED1-202ENST00000342631 MTIF2P46199 727 aaKnown RBP17.82■□□□□ 0.44
SNED1-202ENST00000342631 CASP4P49662 377 aa17.82■□□□□ 0.44
SNED1-202ENST00000342631 FANCCQ00597 558 aa17.82■□□□□ 0.44
SNED1-202ENST00000342631 KRT31Q15323 416 aa17.82■□□□□ 0.44
SNED1-202ENST00000342631 FILIP1LQ4L180 1135 aa17.82■□□□□ 0.44
SNED1-202ENST00000342631 CPB2Q96IY4 423 aa17.82■□□□□ 0.44
SNED1-202ENST00000342631 TUBGCP2Q9BSJ2 902 aa17.82■□□□□ 0.44
SNED1-202ENST00000342631 HAPLN2Q9GZV7 340 aa17.82■□□□□ 0.44
SNED1-202ENST00000342631 CDT1Q9H211 546 aa17.82■□□□□ 0.44
SNED1-202ENST00000342631 TBX21Q9UL17 535 aa17.82■□□□□ 0.44
SNED1-202ENST00000342631 PADI3Q9ULW8 664 aa17.82■□□□□ 0.44
SNED1-202ENST00000342631 PIN4Q9Y237 131 aaKnown RBP17.82■□□□□ 0.44
SNED1-202ENST00000342631 CBFA2T2O43439 604 aa17.81■□□□□ 0.44
SNED1-202ENST00000342631 TPM3P06753 285 aa17.81■□□□□ 0.44
SNED1-202ENST00000342631 GHRP10912 638 aa17.81■□□□□ 0.44
SNED1-202ENST00000342631 KRT13P13646 458 aa17.81■□□□□ 0.44
SNED1-202ENST00000342631 HSP90AA4PQ58FG1 418 aa17.81■□□□□ 0.44
SNED1-202ENST00000342631 EEF1DP3Q658K8 133 aa17.81■□□□□ 0.44
SNED1-202ENST00000342631 TRIM59Q8IWR1 403 aa17.81■□□□□ 0.44
SNED1-202ENST00000342631 BORCS6Q96GS4 357 aa17.81■□□□□ 0.44
SNED1-202ENST00000342631 MFSD14AQ96MC6 490 aa17.81■□□□□ 0.44
SNED1-202ENST00000342631 DNAH12Q6ZR08 3092 aa17.81■□□□□ 0.44
SNED1-202ENST00000342631 FAM189A1O60320 539 aa17.8■□□□□ 0.44
SNED1-202ENST00000342631 NFX1Q12986 1120 aaKnown RBP17.8■□□□□ 0.44
SNED1-202ENST00000342631 MAN2A1Q16706 1144 aa17.8■□□□□ 0.44
SNED1-202ENST00000342631 ZBTB33Q86T24 672 aa17.8■□□□□ 0.44
SNED1-202ENST00000342631 CREBRFQ8IUR6 639 aa17.8■□□□□ 0.44
SNED1-202ENST00000342631 SAAL1Q96ER3 474 aa17.8■□□□□ 0.44
SNED1-202ENST00000342631 TRAIPQ9BWF2 469 aa17.8■□□□□ 0.44
SNED1-202ENST00000342631 AGO3Q9H9G7 860 aaKnown RBP17.8■□□□□ 0.44
SNED1-202ENST00000342631 TMEM39AQ9NV64 488 aa17.8■□□□□ 0.44
SNED1-202ENST00000342631 TANC1Q9C0D5 1861 aa17.8■□□□□ 0.44
SNED1-202ENST00000342631 ZSCAN20P17040 1043 aaPredicted RBP17.8■□□□□ 0.44
SNED1-202ENST00000342631 UBASH3AP57075 661 aa17.8■□□□□ 0.44
SNED1-202ENST00000342631 APTXQ7Z2E3 356 aaKnown RBP17.8■□□□□ 0.44
SNED1-202ENST00000342631 TMC2Q8TDI7 906 aa17.8■□□□□ 0.44
SNED1-202ENST00000342631 ANP32BQ92688 251 aaKnown RBP17.8■□□□□ 0.44
SNED1-202ENST00000342631 FAM213AQ9BRX8 229 aa17.8■□□□□ 0.44
SNED1-202ENST00000342631 FTHL17Q9BXU8 183 aa17.8■□□□□ 0.44
SNED1-202ENST00000342631 A0A1B0GTH6 734 aa17.79■□□□□ 0.44
SNED1-202ENST00000342631 CLTAP09496 248 aa17.79■□□□□ 0.44
SNED1-202ENST00000342631 CD52P31358 61 aa17.79■□□□□ 0.44
SNED1-202ENST00000342631 COPB1P53618 953 aaKnown RBP17.79■□□□□ 0.44
SNED1-202ENST00000342631 PLCB2Q00722 1185 aa17.79■□□□□ 0.44
SNED1-202ENST00000342631 BFSP1Q12934 665 aa17.79■□□□□ 0.44
SNED1-202ENST00000342631 MBTPS1Q14703 1052 aa17.79■□□□□ 0.44
SNED1-202ENST00000342631 SURF1Q15526 300 aa17.79■□□□□ 0.44
SNED1-202ENST00000342631 CRELD2Q6UXH1 353 aaPredicted RBP17.79■□□□□ 0.44
SNED1-202ENST00000342631 CBWD2Q8IUF1 395 aa17.79■□□□□ 0.44
SNED1-202ENST00000342631 RDH13Q8NBN7 331 aa17.79■□□□□ 0.44
SNED1-202ENST00000342631 APBB2Q92870 758 aa17.79■□□□□ 0.44
SNED1-202ENST00000342631 TRIM6Q9C030 488 aaPredicted RBP17.79■□□□□ 0.44
SNED1-202ENST00000342631 TRIM5Q9C035 493 aa17.79■□□□□ 0.44
SNED1-202ENST00000342631 CPSF3Q9UKF6 684 aaKnown RBP17.79■□□□□ 0.44
SNED1-202ENST00000342631 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.79■□□□□ 0.44
SNED1-202ENST00000342631 GOLGA8IPA6NC78 632 aa17.78■□□□□ 0.44
SNED1-202ENST00000342631 GOLGA8JA6NMD2 632 aa17.78■□□□□ 0.44
SNED1-202ENST00000342631 KIAA0355O15063 1070 aa17.78■□□□□ 0.44
SNED1-202ENST00000342631 RFC2P35250 354 aa17.78■□□□□ 0.44
SNED1-202ENST00000342631 GRM5P41594 1212 aa17.78■□□□□ 0.44
SNED1-202ENST00000342631 CYP24A1Q07973 514 aa17.78■□□□□ 0.44
SNED1-202ENST00000342631 TWF2Q6IBS0 349 aaKnown RBP17.78■□□□□ 0.44
SNED1-202ENST00000342631 IFIH1Q9BYX4 1025 aaKnown RBP17.78■□□□□ 0.44
SNED1-202ENST00000342631 STX10O60499 249 aa17.78■□□□□ 0.44
SNED1-202ENST00000342631 HARSP12081 509 aaKnown RBP17.78■□□□□ 0.44
SNED1-202ENST00000342631 SKIP12755 728 aa17.78■□□□□ 0.44
SNED1-202ENST00000342631 ACOT2P49753 483 aa17.78■□□□□ 0.44
SNED1-202ENST00000342631 RAB27AP51159 221 aa17.78■□□□□ 0.44
SNED1-202ENST00000342631 VAMP7P51809 220 aa17.78■□□□□ 0.44
SNED1-202ENST00000342631 PSMD6Q15008 389 aa17.78■□□□□ 0.44
SNED1-202ENST00000342631 VWA3BQ502W6 1294 aa17.78■□□□□ 0.44
SNED1-202ENST00000342631 CDR2LQ86X02 465 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms