RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 PLA2G4FQ68DD2 849 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 KCNV1Q6PIU1 500 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 SAPCD2Q86UD0 394 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 NT5DC3Q86UY8 548 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 C12orf56Q8IXR9 622 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 GOLGA6L1Q8N7Z2 621 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 ZSWIM2Q8NEG5 633 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 TMEM174Q8WUU8 243 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 IFT81Q8WYA0 676 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 OSGEPQ9NPF4 335 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 TELO2Q9Y4R8 837 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 FOXN3O00409 490 aaPredicted RBP16.23■□□□□ 0.19
TPM3-208ENST00000341485 STRNO43815 780 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 TMEM253P0C7T8 217 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 VAMP7P51809 220 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 KIF22Q14807 665 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 TRADDQ15628 312 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 C1orf220Q5T0J3 134 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 ALS2CLQ60I27 953 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 INTS8Q75QN2 995 aaKnown RBP16.23■□□□□ 0.19
TPM3-208ENST00000341485 DAAM2Q86T65 1068 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 CCDC60Q8IWA6 550 aaPredicted RBP16.23■□□□□ 0.19
TPM3-208ENST00000341485 FBXO16Q8IX29 292 aaPredicted RBP16.23■□□□□ 0.19
TPM3-208ENST00000341485 SYCE1Q8N0S2 351 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 PLEKHO2Q8TD55 490 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 GPRC5CQ9NQ84 441 aa16.23■□□□□ 0.19
TPM3-208ENST00000341485 NOC2LQ9Y3T9 749 aaKnown RBP16.23■□□□□ 0.19
TPM3-208ENST00000341485 PGRMC1O00264 195 aaKnown RBP16.22■□□□□ 0.19
TPM3-208ENST00000341485 LRRN2O75325 713 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 RPS6KA5O75582 802 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 GGPS1O95749 300 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 GTF2BQ00403 316 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 LY6KQ17RY6 165 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 LEKR1Q6ZMV7 388 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 HAUS6Q7Z4H7 955 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 ARHGEF19Q8IW93 802 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 ABRAQ8N0Z2 381 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 RASGEF1CQ8N431 466 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 SLC35G2Q8TBE7 412 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 RFFLQ8WZ73 363 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.22■□□□□ 0.193e-15■■■□□ 16.8
TPM3-208ENST00000341485 ZNF302Q9NR11 478 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 TAS2R14Q9NYV8 317 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 HSPBP1Q9NZL4 362 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 HSF2BPO75031 334 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 FARP2O94887 1054 aaPredicted RBP16.22■□□□□ 0.19
TPM3-208ENST00000341485 CCDC172P0C7W6 258 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 TNFAIP3P21580 790 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 RFX1P22670 979 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 PRKCEQ02156 737 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 EPC2Q52LR7 807 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 GPR142Q7Z601 462 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 PALB2Q86YC2 1186 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 FMNL3Q8IVF7 1028 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 ARHGEF26Q96DR7 871 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 HES6Q96HZ4 224 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 CEP170P1Q96L14 293 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 TIPINQ9BVW5 301 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 AP1M1Q9BXS5 423 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 ST6GALNAC4Q9H4F1 302 aa16.22■□□□□ 0.19
TPM3-208ENST00000341485 SEPT9Q9UHD8 586 aaPredicted RBP16.22■□□□□ 0.19
TPM3-208ENST00000341485 SYNGAP1Q96PV0 1343 aa16.21■□□□□ 0.19
TPM3-208ENST00000341485 PASKQ96RG2 1323 aa16.21■□□□□ 0.19
TPM3-208ENST00000341485 WDR81Q562E7 1941 aa16.21■□□□□ 0.19
TPM3-208ENST00000341485 GOLGA6CA6NDK9 693 aa16.21■□□□□ 0.19
TPM3-208ENST00000341485 SLC16A4O15374 487 aa16.21■□□□□ 0.19
TPM3-208ENST00000341485 ZNF862O60290 1169 aa16.21■□□□□ 0.19
TPM3-208ENST00000341485 BUB1BO60566 1050 aaPredicted RBP16.21■□□□□ 0.19
TPM3-208ENST00000341485 GOLGA6DP0CG33 693 aa16.21■□□□□ 0.19
TPM3-208ENST00000341485 ABCB4P21439 1286 aa16.21■□□□□ 0.19
TPM3-208ENST00000341485 MAPK4P31152 587 aa16.21■□□□□ 0.19
TPM3-208ENST00000341485 GCLMP48507 274 aa16.21■□□□□ 0.19
TPM3-208ENST00000341485 PEX3P56589 373 aa16.21■□□□□ 0.19
TPM3-208ENST00000341485 TAF1CQ15572 869 aaPredicted RBP16.21■□□□□ 0.19
TPM3-208ENST00000341485 ZNF792Q3KQV3 632 aa16.21■□□□□ 0.19
TPM3-208ENST00000341485 ANO5Q75V66 913 aa16.21■□□□□ 0.19
TPM3-208ENST00000341485 ARMCX2Q7L311 632 aa16.21■□□□□ 0.19
TPM3-208ENST00000341485 DPP9Q86TI2 863 aa16.21■□□□□ 0.19
TPM3-208ENST00000341485 XXYLT1Q8NBI6 393 aa16.21■□□□□ 0.19
TPM3-208ENST00000341485 FAM76AQ8TAV0 307 aa16.21■□□□□ 0.19
TPM3-208ENST00000341485 MORC4Q8TE76 937 aa16.21■□□□□ 0.19
TPM3-208ENST00000341485 CALR3Q96L12 384 aaKnown RBP16.21■□□□□ 0.19
TPM3-208ENST00000341485 UBE2TQ9NPD8 197 aaPredicted RBP16.21■□□□□ 0.19
TPM3-208ENST00000341485 GOLGA6AQ9NYA3 693 aa16.21■□□□□ 0.19
TPM3-208ENST00000341485 CPA4Q9UI42 421 aa16.21■□□□□ 0.19
TPM3-208ENST00000341485 PLXNA1Q9UIW2 1896 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 FAM170AA1A519 330 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 GOLGA8KD6RF30 607 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 IGF2BP3O00425 579 aaKnown RBP eCLIP16.2■□□□□ 0.181e-7■■■■□ 23.3
TPM3-208ENST00000341485 P4HA2O15460 535 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 OPA1O60313 960 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 ATG7O95352 703 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 SLC10A3P09131 477 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 NCKAP1LP55160 1127 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 METTL7BQ6UX53 244 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 LRRC31Q6UY01 552 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 PLEKHH3Q7Z736 793 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 MREGQ8N565 214 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 SLC20A1Q8WUM9 679 aa16.2■□□□□ 0.18
TPM3-208ENST00000341485 CTNNBL1Q8WYA6 563 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms