RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 CCSER1Q9C0I3 900 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 RBSNQ9H1K0 784 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 C17orf75Q9HAS0 396 aa13.72□□□□□ -0.21
LIN54-201ENST00000340417 CTNNB1P35222 781 aa13.71□□□□□ -0.21
LIN54-201ENST00000340417 NAMPTP43490 491 aa13.71□□□□□ -0.21
LIN54-201ENST00000340417 VPS41P49754 854 aa13.71□□□□□ -0.21
LIN54-201ENST00000340417 SELENOSQ9BQE4 189 aa13.71□□□□□ -0.21
LIN54-201ENST00000340417 KIFC3Q9BVG8 833 aa13.71□□□□□ -0.21
LIN54-201ENST00000340417 KCNK9Q9NPC2 374 aa13.71□□□□□ -0.21
LIN54-201ENST00000340417 ASNSD1Q9NWL6 643 aa13.71□□□□□ -0.21
LIN54-201ENST00000340417 PRKCZQ05513 592 aa13.71□□□□□ -0.21
LIN54-201ENST00000340417 KCNH2Q12809 1159 aa13.71□□□□□ -0.21
LIN54-201ENST00000340417 TDRD10Q5VZ19 366 aaKnown RBP13.71□□□□□ -0.21
LIN54-201ENST00000340417 INTS2Q9H0H0 1204 aaKnown RBP13.71□□□□□ -0.21
LIN54-201ENST00000340417 SLC28A3Q9HAS3 691 aa13.71□□□□□ -0.21
LIN54-201ENST00000340417 SLC37A4O43826 429 aa13.71□□□□□ -0.21
LIN54-201ENST00000340417 MAP2K2P36507 400 aa13.71□□□□□ -0.21
LIN54-201ENST00000340417 ADCY8P40145 1251 aa13.71□□□□□ -0.21
LIN54-201ENST00000340417 NCOA4Q13772 614 aa13.71□□□□□ -0.21
LIN54-201ENST00000340417 SGSM1Q2NKQ1 1148 aa13.71□□□□□ -0.21
LIN54-201ENST00000340417 TRIM58Q8NG06 486 aa13.71□□□□□ -0.21
LIN54-201ENST00000340417 HASPINQ8TF76 798 aa13.71□□□□□ -0.21
LIN54-201ENST00000340417 SAMSN1Q9NSI8 373 aaKnown RBP13.71□□□□□ -0.21
LIN54-201ENST00000340417 TRIM49BA6NDI0 452 aa13.71□□□□□ -0.22
LIN54-201ENST00000340417 CREB3O43889 395 aa13.71□□□□□ -0.22
LIN54-201ENST00000340417 CALB1P05937 261 aa13.71□□□□□ -0.22
LIN54-201ENST00000340417 MTERF4Q7Z6M4 381 aaKnown RBP13.71□□□□□ -0.22
LIN54-201ENST00000340417 CTAGE3PQ8IX95 158 aa13.71□□□□□ -0.22
LIN54-201ENST00000340417 MRPS31Q92665 395 aaKnown RBP13.71□□□□□ -0.22
LIN54-201ENST00000340417 MKL1Q969V6 931 aa13.71□□□□□ -0.22
LIN54-201ENST00000340417 FAM50BQ9Y247 325 aa13.71□□□□□ -0.22
LIN54-201ENST00000340417 LRRD1A4D1F6 860 aa13.71□□□□□ -0.22
LIN54-201ENST00000340417 SGK1O00141 431 aa13.71□□□□□ -0.22
LIN54-201ENST00000340417 PRCPP42785 496 aa13.71□□□□□ -0.22
LIN54-201ENST00000340417 FXR2P51116 673 aaKnown RBP eCLIP13.71□□□□□ -0.22
LIN54-201ENST00000340417 COG7P83436 770 aa13.71□□□□□ -0.22
LIN54-201ENST00000340417 MAPRE1Q15691 268 aaKnown RBP13.71□□□□□ -0.22
LIN54-201ENST00000340417 KIAA1755Q5JYT7 1200 aa13.71□□□□□ -0.22
LIN54-201ENST00000340417 ARHGEF18Q6ZSZ5 1173 aa13.71□□□□□ -0.22
LIN54-201ENST00000340417 ADAT2Q7Z6V5 191 aaKnown RBP13.71□□□□□ -0.22
LIN54-201ENST00000340417 DNAAF3Q8N9W5 541 aa13.71□□□□□ -0.22
LIN54-201ENST00000340417 COPS5Q92905 334 aa13.71□□□□□ -0.22
LIN54-201ENST00000340417 UBE2OQ9C0C9 1292 aaKnown RBP13.71□□□□□ -0.22
LIN54-201ENST00000340417 HIPK3Q9H422 1215 aa13.71□□□□□ -0.22
LIN54-201ENST00000340417 TLR2O60603 784 aa13.7□□□□□ -0.22
LIN54-201ENST00000340417 POMCP01189 267 aa13.7□□□□□ -0.22
LIN54-201ENST00000340417 SLURP2P0DP57 97 aa13.7□□□□□ -0.22
LIN54-201ENST00000340417 TCP11X2Q5H9J9 407 aa13.7□□□□□ -0.22
LIN54-201ENST00000340417 CELF3Q5SZQ8 465 aaKnown RBP13.7□□□□□ -0.22
LIN54-201ENST00000340417 ENOSF1Q7L5Y1 443 aa13.7□□□□□ -0.22
LIN54-201ENST00000340417 VPS37BQ9H9H4 285 aa13.7□□□□□ -0.22
LIN54-201ENST00000340417 EIF3CLB5ME19 914 aaKnown RBP13.7□□□□□ -0.22
LIN54-201ENST00000340417 CASP14P31944 242 aa13.7□□□□□ -0.22
LIN54-201ENST00000340417 EPHB3P54753 998 aa13.7□□□□□ -0.22
LIN54-201ENST00000340417 PSMC1P62191 440 aaKnown RBP13.7□□□□□ -0.22
LIN54-201ENST00000340417 SEC23AQ15436 765 aa13.7□□□□□ -0.22
LIN54-201ENST00000340417 SNRNP35Q16560 246 aaKnown RBP13.7□□□□□ -0.22
LIN54-201ENST00000340417 RASGRP2Q7LDG7 609 aa13.7□□□□□ -0.22
LIN54-201ENST00000340417 FIBCD1Q8N539 461 aa13.7□□□□□ -0.22
LIN54-201ENST00000340417 ENOX1Q8TC92 643 aaKnown RBP13.7□□□□□ -0.22
LIN54-201ENST00000340417 EIF3CQ99613 913 aaKnown RBP13.7□□□□□ -0.22
LIN54-201ENST00000340417 PDXKO00764 312 aa13.7□□□□□ -0.22
LIN54-201ENST00000340417 Q4G0T1 1027 aa13.7□□□□□ -0.22
LIN54-201ENST00000340417 DARS2Q6PI48 645 aaKnown RBP13.7□□□□□ -0.22
LIN54-201ENST00000340417 BZW1Q7L1Q6 419 aaKnown RBP13.7□□□□□ -0.22
LIN54-201ENST00000340417 GUF1Q8N442 669 aaKnown RBP13.7□□□□□ -0.22
LIN54-201ENST00000340417 DPP3Q9NY33 737 aa13.7□□□□□ -0.22
LIN54-201ENST00000340417 MAD1L1Q9Y6D9 718 aa13.7□□□□□ -0.22
LIN54-201ENST00000340417 LMO7Q8WWI1 1683 aa13.7□□□□□ -0.22
LIN54-201ENST00000340417 EXTL3O43909 919 aa13.7□□□□□ -0.22
LIN54-201ENST00000340417 IVLP07476 585 aa13.7□□□□□ -0.22
LIN54-201ENST00000340417 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.7□□□□□ -0.22
LIN54-201ENST00000340417 KRT12Q99456 494 aa13.7□□□□□ -0.22
LIN54-201ENST00000340417 ALDH3A1P30838 453 aa13.7□□□□□ -0.22
LIN54-201ENST00000340417 CES5AQ6NT32 575 aa13.7□□□□□ -0.22
LIN54-201ENST00000340417 HVCN1Q96D96 273 aa13.7□□□□□ -0.22
LIN54-201ENST00000340417 U2AF2P26368 475 aaKnown RBP eCLIP13.69□□□□□ -0.22
LIN54-201ENST00000340417 GNL1P36915 607 aaPredicted RBP13.69□□□□□ -0.22
LIN54-201ENST00000340417 LAMTOR4Q0VGL1 99 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 SEPT6Q14141 434 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 DLK2Q6UY11 383 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 TMEM60Q9H2L4 133 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 RGS17Q9UGC6 210 aaPredicted RBP13.69□□□□□ -0.22
LIN54-201ENST00000340417 ZMYND8Q9ULU4 1186 aaPredicted RBP13.69□□□□□ -0.22
LIN54-201ENST00000340417 NRCAMQ92823 1304 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 ZNF280DQ6N043 979 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 CD302Q8IX05 232 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 L3MBTL3Q96JM7 780 aaPredicted RBP13.69□□□□□ -0.22
LIN54-201ENST00000340417 SP110Q9HB58 689 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 CREBZFQ9NS37 354 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 TAF6LQ9Y6J9 622 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 CARNS1A5YM72 827 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 CASTOR2A6NHX0 329 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 SERPING1P05155 500 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 LBX1P52954 281 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 TUBB4BP68371 445 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 ZC2HC1CQ53FD0 456 aaPredicted RBP13.69□□□□□ -0.22
LIN54-201ENST00000340417 EFHC2Q5JST6 749 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 MPZL3Q6UWV2 235 aa13.69□□□□□ -0.22
LIN54-201ENST00000340417 ILDR2Q71H61 639 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms