RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 UBASH3AP57075 661 aa15.85■□□□□ 0.13
NIPAL3-202ENST00000339255 APTXQ7Z2E3 356 aaKnown RBP15.85■□□□□ 0.13
NIPAL3-202ENST00000339255 CREBRFQ8IUR6 639 aa15.85■□□□□ 0.13
NIPAL3-202ENST00000339255 MRFAP1L1Q96HT8 127 aa15.85■□□□□ 0.13
NIPAL3-202ENST00000339255 PCIF1Q9H4Z3 704 aa15.85■□□□□ 0.13
NIPAL3-202ENST00000339255 C11orf49Q9H6J7 331 aa15.85■□□□□ 0.13
NIPAL3-202ENST00000339255 IFNKQ9P0W0 207 aa15.85■□□□□ 0.13
NIPAL3-202ENST00000339255 A0A1B0GTH6 734 aa15.84■□□□□ 0.13
NIPAL3-202ENST00000339255 TTLL13PA6NNM8 815 aa15.84■□□□□ 0.13
NIPAL3-202ENST00000339255 ABLIM1O14639 778 aa15.84■□□□□ 0.13
NIPAL3-202ENST00000339255 RPS6KA5O75582 802 aa15.84■□□□□ 0.13
NIPAL3-202ENST00000339255 KRT13P13646 458 aa15.84■□□□□ 0.13
NIPAL3-202ENST00000339255 CASP4P49662 377 aa15.84■□□□□ 0.13
NIPAL3-202ENST00000339255 COPB1P53618 953 aaKnown RBP15.84■□□□□ 0.13
NIPAL3-202ENST00000339255 POU5F1Q01860 360 aaKnown RBP15.84■□□□□ 0.13
NIPAL3-202ENST00000339255 DCAF4L1Q3SXM0 396 aa15.84■□□□□ 0.13
NIPAL3-202ENST00000339255 NECAB2Q7Z6G3 386 aa15.84■□□□□ 0.13
NIPAL3-202ENST00000339255 BORCS6Q96GS4 357 aa15.84■□□□□ 0.13
NIPAL3-202ENST00000339255 PDZD7Q9H5P4 517 aa15.84■□□□□ 0.13
NIPAL3-202ENST00000339255 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.84■□□□□ 0.13
NIPAL3-202ENST00000339255 ANK1P16157 1881 aa15.84■□□□□ 0.13
NIPAL3-202ENST00000339255 RALGAPA2Q2PPJ7 1873 aa15.83■□□□□ 0.13
NIPAL3-202ENST00000339255 ZNF233A6NK53 670 aa15.83■□□□□ 0.13
NIPAL3-202ENST00000339255 LGALS16A8MUM7 142 aa15.83■□□□□ 0.13
NIPAL3-202ENST00000339255 GPR182O15218 404 aa15.83■□□□□ 0.13
NIPAL3-202ENST00000339255 PQBP1O60828 265 aaKnown RBP15.83■□□□□ 0.13
NIPAL3-202ENST00000339255 ZNF75DP51815 510 aa15.83■□□□□ 0.13
NIPAL3-202ENST00000339255 FBXO47Q5MNV8 452 aa15.83■□□□□ 0.13
NIPAL3-202ENST00000339255 ZNF618Q5T7W0 954 aa15.83■□□□□ 0.13
NIPAL3-202ENST00000339255 SLC27A1Q6PCB7 646 aa15.83■□□□□ 0.13
NIPAL3-202ENST00000339255 DIS3LQ8TF46 1054 aaKnown RBP15.83■□□□□ 0.13
NIPAL3-202ENST00000339255 SAAL1Q96ER3 474 aa15.83■□□□□ 0.13
NIPAL3-202ENST00000339255 NOC4LQ9BVI4 516 aaKnown RBP15.83■□□□□ 0.13
NIPAL3-202ENST00000339255 XPO4Q9C0E2 1151 aaKnown RBP15.83■□□□□ 0.13
NIPAL3-202ENST00000339255 CDT1Q9H211 546 aa15.83■□□□□ 0.13
NIPAL3-202ENST00000339255 PARNO95453 639 aaKnown RBP15.83■□□□□ 0.12
NIPAL3-202ENST00000339255 ADCY5O95622 1261 aa15.83■□□□□ 0.12
NIPAL3-202ENST00000339255 SELPP16109 830 aa15.83■□□□□ 0.12
NIPAL3-202ENST00000339255 HOXA11P31270 313 aaPredicted RBP15.83■□□□□ 0.12
NIPAL3-202ENST00000339255 ATN1P54259 1190 aaPredicted RBP15.83■□□□□ 0.12
NIPAL3-202ENST00000339255 MCCD1P59942 119 aaPredicted RBP15.83■□□□□ 0.12
NIPAL3-202ENST00000339255 BFSP1Q12934 665 aa15.83■□□□□ 0.12
NIPAL3-202ENST00000339255 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.83■□□□□ 0.12
NIPAL3-202ENST00000339255 FAM228AQ86W67 206 aa15.83■□□□□ 0.12
NIPAL3-202ENST00000339255 TMC2Q8TDI7 906 aa15.83■□□□□ 0.12
NIPAL3-202ENST00000339255 PAWRQ96IZ0 340 aaKnown RBP15.83■□□□□ 0.12
NIPAL3-202ENST00000339255 ZBTB45Q96K62 511 aaPredicted RBP15.83■□□□□ 0.12
NIPAL3-202ENST00000339255 FAM213AQ9BRX8 229 aa15.83■□□□□ 0.12
NIPAL3-202ENST00000339255 RTN4Q9NQC3 1192 aaKnown RBP15.83■□□□□ 0.12
NIPAL3-202ENST00000339255 CHST12Q9NRB3 414 aa15.83■□□□□ 0.12
NIPAL3-202ENST00000339255 TAB2Q9NYJ8 693 aa15.83■□□□□ 0.12
NIPAL3-202ENST00000339255 PIN4Q9Y237 131 aaKnown RBP15.83■□□□□ 0.12
NIPAL3-202ENST00000339255 USP20Q9Y2K6 914 aa15.83■□□□□ 0.12
NIPAL3-202ENST00000339255 NOC2LQ9Y3T9 749 aaKnown RBP15.83■□□□□ 0.12
NIPAL3-202ENST00000339255 AP5Z1O43299 807 aa15.82■□□□□ 0.12
NIPAL3-202ENST00000339255 FAM189A1O60320 539 aa15.82■□□□□ 0.12
NIPAL3-202ENST00000339255 CDC25BP30305 580 aa15.82■□□□□ 0.12
NIPAL3-202ENST00000339255 PAK2Q13177 524 aa15.82■□□□□ 0.12
NIPAL3-202ENST00000339255 TRIM60Q495X7 471 aa15.82■□□□□ 0.12
NIPAL3-202ENST00000339255 VWA3BQ502W6 1294 aa15.82■□□□□ 0.12
NIPAL3-202ENST00000339255 FKBP15Q5T1M5 1219 aa15.82■□□□□ 0.12
NIPAL3-202ENST00000339255 LRRC8DQ7L1W4 858 aa15.82■□□□□ 0.12
NIPAL3-202ENST00000339255 CBWD2Q8IUF1 395 aa15.82■□□□□ 0.12
NIPAL3-202ENST00000339255 CPB2Q96IY4 423 aa15.82■□□□□ 0.12
NIPAL3-202ENST00000339255 MFSD14AQ96MC6 490 aa15.82■□□□□ 0.12
NIPAL3-202ENST00000339255 HAPLN2Q9GZV7 340 aa15.82■□□□□ 0.12
NIPAL3-202ENST00000339255 NDST4Q9H3R1 872 aa15.82■□□□□ 0.12
NIPAL3-202ENST00000339255 GOLGA8IPA6NC78 632 aa15.81■□□□□ 0.12
NIPAL3-202ENST00000339255 GOLGA8JA6NMD2 632 aa15.81■□□□□ 0.12
NIPAL3-202ENST00000339255 STX10O60499 249 aa15.81■□□□□ 0.12
NIPAL3-202ENST00000339255 FGFR4P22455 802 aa15.81■□□□□ 0.12
NIPAL3-202ENST00000339255 TLE2Q04725 743 aa15.81■□□□□ 0.12
NIPAL3-202ENST00000339255 CYP24A1Q07973 514 aa15.81■□□□□ 0.12
NIPAL3-202ENST00000339255 MIIPQ5JXC2 388 aa15.81■□□□□ 0.12
NIPAL3-202ENST00000339255 TCERG1LQ5VWI1 586 aa15.81■□□□□ 0.12
NIPAL3-202ENST00000339255 EEF1DP3Q658K8 133 aa15.81■□□□□ 0.12
NIPAL3-202ENST00000339255 ZBTB33Q86T24 672 aa15.81■□□□□ 0.12
NIPAL3-202ENST00000339255 SLC35C1Q96A29 364 aa15.81■□□□□ 0.12
NIPAL3-202ENST00000339255 VPS16Q9H269 839 aa15.81■□□□□ 0.12
NIPAL3-202ENST00000339255 ST3GAL5Q9UNP4 418 aa15.81■□□□□ 0.12
NIPAL3-202ENST00000339255 PES1O00541 588 aaKnown RBP15.8■□□□□ 0.12
NIPAL3-202ENST00000339255 ADRB2P07550 413 aa15.8■□□□□ 0.12
NIPAL3-202ENST00000339255 CLTAP09496 248 aa15.8■□□□□ 0.12
NIPAL3-202ENST00000339255 GHRP10912 638 aa15.8■□□□□ 0.12
NIPAL3-202ENST00000339255 HARSP12081 509 aaKnown RBP15.8■□□□□ 0.12
NIPAL3-202ENST00000339255 VAMP7P51809 220 aa15.8■□□□□ 0.12
NIPAL3-202ENST00000339255 LPIN1Q14693 890 aa15.8■□□□□ 0.12
NIPAL3-202ENST00000339255 NR1I3Q14994 352 aa15.8■□□□□ 0.12
NIPAL3-202ENST00000339255 DCAF17Q5H9S7 520 aaPredicted RBP15.8■□□□□ 0.12
NIPAL3-202ENST00000339255 RDH13Q8NBN7 331 aa15.8■□□□□ 0.12
NIPAL3-202ENST00000339255 NAP1L5Q96NT1 182 aaPredicted RBP15.8■□□□□ 0.12
NIPAL3-202ENST00000339255 TRIM6Q9C030 488 aaPredicted RBP15.8■□□□□ 0.12
NIPAL3-202ENST00000339255 HIPK3Q9H422 1215 aa15.8■□□□□ 0.12
NIPAL3-202ENST00000339255 ERVK-5Q9HDB9 667 aa15.8■□□□□ 0.12
NIPAL3-202ENST00000339255 RBAKQ9NYW8 714 aaPredicted RBP15.8■□□□□ 0.12
NIPAL3-202ENST00000339255 CPSF3Q9UKF6 684 aaKnown RBP15.8■□□□□ 0.12
NIPAL3-202ENST00000339255 TRIP11Q15643 1979 aa15.8■□□□□ 0.12
NIPAL3-202ENST00000339255 PDCD11Q14690 1871 aaKnown RBP15.8■□□□□ 0.12
NIPAL3-202ENST00000339255 A0A1W2PQC6 194 aa15.79■□□□□ 0.12
NIPAL3-202ENST00000339255 N4BP1O75113 896 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms