RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 NIPA1Q7RTP0 329 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 ANKS4BQ8N8V4 417 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 TBC1D31Q96DN5 1066 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 FAM114A2Q9NRY5 505 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 PNMA2Q9UL42 364 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 PARP14Q460N5 1801 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 ADM5C9JUS6 153 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 ASAP2O43150 1006 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 HIP1RO75146 1068 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 AFPP02771 609 aaKnown RBP20.22■□□□□ 0.83
PSPC1-201ENST00000338910 ITIH4Q14624 930 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 PPP2R5AQ15172 486 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 ARHGEF16Q5VV41 709 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 PADI6Q6TGC4 694 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 ZNF571Q7Z3V5 609 aaPredicted RBP20.22■□□□□ 0.83
PSPC1-201ENST00000338910 IRF2BP2Q7Z5L9 587 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 PIGWQ7Z7B1 504 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 KIRREL3Q8IZU9 778 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 TPCN2Q8NHX9 752 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 CCDC26Q8TAB7 109 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 RNF146Q9NTX7 359 aa20.22■□□□□ 0.83
PSPC1-201ENST00000338910 TESPA1A2RU30 521 aaPredicted RBP20.21■□□□□ 0.83
PSPC1-201ENST00000338910 EIF3DO15371 548 aaKnown RBP eCLIP20.21■□□□□ 0.832e-6■■■■□ 22.9
PSPC1-201ENST00000338910 CAND2O75155 1236 aa20.21■□□□□ 0.83
PSPC1-201ENST00000338910 FDX1P10109 184 aa20.21■□□□□ 0.83
PSPC1-201ENST00000338910 DSG3P32926 999 aa20.21■□□□□ 0.83
PSPC1-201ENST00000338910 ZNF131P52739 623 aa20.21■□□□□ 0.83
PSPC1-201ENST00000338910 POU5F1Q01860 360 aaKnown RBP20.21■□□□□ 0.83
PSPC1-201ENST00000338910 NAA25Q14CX7 972 aa20.21■□□□□ 0.83
PSPC1-201ENST00000338910 SNRNP48Q6IEG0 339 aaKnown RBP20.21■□□□□ 0.83
PSPC1-201ENST00000338910 CHADLQ6NUI6 762 aa20.21■□□□□ 0.83
PSPC1-201ENST00000338910 SLFN11Q7Z7L1 901 aa20.21■□□□□ 0.83
PSPC1-201ENST00000338910 CCDC63Q8NA47 563 aa20.21■□□□□ 0.83
PSPC1-201ENST00000338910 STAMBPL1Q96FJ0 436 aa20.21■□□□□ 0.83
PSPC1-201ENST00000338910 RSRC1Q96IZ7 334 aaKnown RBP20.21■□□□□ 0.83
PSPC1-201ENST00000338910 PDCD2LQ9BRP1 358 aa20.21■□□□□ 0.83
PSPC1-201ENST00000338910 PXMP2Q9NR77 195 aa20.21■□□□□ 0.83
PSPC1-201ENST00000338910 MAP3K20Q9NYL2 800 aaKnown RBP20.21■□□□□ 0.83
PSPC1-201ENST00000338910 KCND2Q9NZV8 630 aa20.21■□□□□ 0.83
PSPC1-201ENST00000338910 RLFQ13129 1914 aa20.21■□□□□ 0.83
PSPC1-201ENST00000338910 ZMYM2Q9UBW7 1377 aa20.21■□□□□ 0.83
PSPC1-201ENST00000338910 VGLL4Q14135 290 aa20.21■□□□□ 0.83
PSPC1-201ENST00000338910 NOL9Q5SY16 702 aaKnown RBP20.21■□□□□ 0.83
PSPC1-201ENST00000338910 REPS2Q8NFH8 660 aa20.21■□□□□ 0.83
PSPC1-201ENST00000338910 ATP8B4Q8TF62 1192 aa20.21■□□□□ 0.83
PSPC1-201ENST00000338910 ATXN2LQ8WWM7 1075 aaKnown RBP20.21■□□□□ 0.83
PSPC1-201ENST00000338910 DCPSQ96C86 337 aaKnown RBP20.21■□□□□ 0.83
PSPC1-201ENST00000338910 CELF4Q9BZC1 486 aaKnown RBP20.21■□□□□ 0.83
PSPC1-201ENST00000338910 TMOD4Q9NZQ9 345 aa20.21■□□□□ 0.83
PSPC1-201ENST00000338910 NAGPAQ9UK23 515 aa20.21■□□□□ 0.83
PSPC1-201ENST00000338910 STXBP5LQ9Y2K9 1186 aa20.21■□□□□ 0.83
PSPC1-201ENST00000338910 TMEM150BA6NC51 233 aa20.2■□□□□ 0.82
PSPC1-201ENST00000338910 CHN1P15882 459 aa20.2■□□□□ 0.82
PSPC1-201ENST00000338910 C9orf131Q5VYM1 1079 aa20.2■□□□□ 0.82
PSPC1-201ENST00000338910 CATSPERGQ6ZRH7 1159 aa20.2■□□□□ 0.82
PSPC1-201ENST00000338910 DAW1Q8N136 415 aa20.2■□□□□ 0.82
PSPC1-201ENST00000338910 NEK9Q8TD19 979 aa20.2■□□□□ 0.82
PSPC1-201ENST00000338910 SEL1LQ9UBV2 794 aa20.2■□□□□ 0.82
PSPC1-201ENST00000338910 ZNF214Q9UL59 606 aaPredicted RBP20.2■□□□□ 0.82
PSPC1-201ENST00000338910 UTP11Q9Y3A2 253 aaKnown RBP20.2■□□□□ 0.82
PSPC1-201ENST00000338910 COL11A1P12107 1806 aaPredicted RBP20.2■□□□□ 0.82
PSPC1-201ENST00000338910 BUB1BO60566 1050 aaPredicted RBP20.19■□□□□ 0.82
PSPC1-201ENST00000338910 MMEP08473 750 aa20.19■□□□□ 0.82
PSPC1-201ENST00000338910 TMEM132BQ14DG7 1078 aa20.19■□□□□ 0.82
PSPC1-201ENST00000338910 PEX26Q7Z412 305 aa20.19■□□□□ 0.82
PSPC1-201ENST00000338910 HOOK3Q86VS8 718 aa20.19■□□□□ 0.82
PSPC1-201ENST00000338910 DNAAF5Q86Y56 855 aa20.19■□□□□ 0.82
PSPC1-201ENST00000338910 SULF1Q8IWU6 871 aa20.19■□□□□ 0.82
PSPC1-201ENST00000338910 NSMCE1Q8WV22 266 aa20.19■□□□□ 0.82
PSPC1-201ENST00000338910 CNKSR2Q8WXI2 1034 aa20.19■□□□□ 0.82
PSPC1-201ENST00000338910 DPH5Q9H2P9 285 aa20.19■□□□□ 0.82
PSPC1-201ENST00000338910 ADAM7Q9H2U9 754 aa20.19■□□□□ 0.82
PSPC1-201ENST00000338910 EPB41L4BQ9H329 900 aa20.19■□□□□ 0.82
PSPC1-201ENST00000338910 METTL14Q9HCE5 456 aaKnown RBP20.19■□□□□ 0.82
PSPC1-201ENST00000338910 TBC1D22BQ9NU19 505 aa20.19■□□□□ 0.82
PSPC1-201ENST00000338910 SUCLA2Q9P2R7 463 aaPredicted RBP20.19■□□□□ 0.82
PSPC1-201ENST00000338910 ADAMTS5Q9UNA0 930 aa20.19■□□□□ 0.82
PSPC1-201ENST00000338910 ATP8A1Q9Y2Q0 1164 aa20.19■□□□□ 0.82
PSPC1-201ENST00000338910 RBBP6Q7Z6E9 1792 aaKnown RBP20.19■□□□□ 0.82
PSPC1-201ENST00000338910 MMP13P45452 471 aa20.19■□□□□ 0.82
PSPC1-201ENST00000338910 QARSP47897 775 aaKnown RBP20.19■□□□□ 0.82
PSPC1-201ENST00000338910 MAPK7Q13164 816 aa20.19■□□□□ 0.82
PSPC1-201ENST00000338910 EXOC3L4Q17RC7 722 aa20.19■□□□□ 0.82
PSPC1-201ENST00000338910 SLC35C1Q96A29 364 aa20.19■□□□□ 0.82
PSPC1-201ENST00000338910 FMO2Q99518 471 aa20.19■□□□□ 0.82
PSPC1-201ENST00000338910 SNCAIPQ9Y6H5 919 aa20.19■□□□□ 0.82
PSPC1-201ENST00000338910 NUDT17P0C025 328 aa20.18■□□□□ 0.82
PSPC1-201ENST00000338910 PON1P27169 355 aa20.18■□□□□ 0.82
PSPC1-201ENST00000338910 CYP2J2P51589 502 aa20.18■□□□□ 0.82
PSPC1-201ENST00000338910 MYO1EQ12965 1108 aa20.18■□□□□ 0.82
PSPC1-201ENST00000338910 DPY19L2P1Q6NXN4 242 aa20.18■□□□□ 0.82
PSPC1-201ENST00000338910 ALKBH5Q6P6C2 394 aaKnown RBP20.18■□□□□ 0.82
PSPC1-201ENST00000338910 TCP11Q8WWU5 503 aa20.18■□□□□ 0.82
PSPC1-201ENST00000338910 BZW2Q9Y6E2 419 aaKnown RBP20.18■□□□□ 0.82
PSPC1-201ENST00000338910 CFAP73A6NFT4 308 aa20.18■□□□□ 0.82
PSPC1-201ENST00000338910 SLC16A3O15427 465 aaKnown RBP20.18■□□□□ 0.82
PSPC1-201ENST00000338910 UGCGQ16739 394 aa20.18■□□□□ 0.82
PSPC1-201ENST00000338910 FAM186BQ8IYM0 893 aa20.18■□□□□ 0.82
PSPC1-201ENST00000338910 SAMD3Q8N6K7 520 aa20.18■□□□□ 0.82
PSPC1-201ENST00000338910 PGM2Q96G03 612 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms