RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 CDKL3Q8IVW4 592 aaPredicted RBP8.21□□□□□ -1.09
TRIM2-201ENST00000338700 FMR1NBQ8N0W7 255 aaPredicted RBP8.21□□□□□ -1.09
TRIM2-201ENST00000338700 FGD4Q96M96 766 aa8.21□□□□□ -1.09
TRIM2-201ENST00000338700 HACD3Q9P035 362 aa8.21□□□□□ -1.09
TRIM2-201ENST00000338700 MEGF6O75095 1541 aa8.21□□□□□ -1.1
TRIM2-201ENST00000338700 MGEA5O60502 916 aa8.21□□□□□ -1.1
TRIM2-201ENST00000338700 DGAT1O75907 488 aa8.21□□□□□ -1.1
TRIM2-201ENST00000338700 GGPS1O95749 300 aa8.21□□□□□ -1.1
TRIM2-201ENST00000338700 NDUFB10O96000 172 aa8.21□□□□□ -1.1
TRIM2-201ENST00000338700 ATXN8OSP0DMR3 200 aa8.21□□□□□ -1.1
TRIM2-201ENST00000338700 CASP1P29466 404 aa8.21□□□□□ -1.1
TRIM2-201ENST00000338700 GCLCP48506 637 aaPredicted RBP8.21□□□□□ -1.1
TRIM2-201ENST00000338700 HDLBPQ00341 1268 aaKnown RBP8.21□□□□□ -1.1
TRIM2-201ENST00000338700 NSUN2Q08J23 767 aaKnown RBP eCLIP8.21□□□□□ -1.1
TRIM2-201ENST00000338700 ZKSCAN8Q15776 578 aaPredicted RBP8.21□□□□□ -1.1
TRIM2-201ENST00000338700 IER5Q5VY09 327 aa8.21□□□□□ -1.1
TRIM2-201ENST00000338700 FBXL13Q8NEE6 735 aa8.21□□□□□ -1.1
TRIM2-201ENST00000338700 VCPKMTQ9H867 229 aa8.21□□□□□ -1.1
TRIM2-201ENST00000338700 TMEM88BA6NKF7 163 aa8.21□□□□□ -1.1
TRIM2-201ENST00000338700 MAGEB2O15479 319 aa8.21□□□□□ -1.1
TRIM2-201ENST00000338700 KIF1CO43896 1103 aaKnown RBP8.21□□□□□ -1.1
TRIM2-201ENST00000338700 ZBTB17Q13105 803 aa8.21□□□□□ -1.1
TRIM2-201ENST00000338700 ARRDC4Q8NCT1 418 aa8.21□□□□□ -1.1
TRIM2-201ENST00000338700 SEPT1Q8WYJ6 367 aa8.21□□□□□ -1.1
TRIM2-201ENST00000338700 EMSYQ7Z589 1322 aa8.21□□□□□ -1.1
TRIM2-201ENST00000338700 TBX3O15119 743 aa8.21□□□□□ -1.1
TRIM2-201ENST00000338700 SLC16A3O15427 465 aaKnown RBP8.21□□□□□ -1.1
TRIM2-201ENST00000338700 SLC8A1P32418 973 aa8.21□□□□□ -1.1
TRIM2-201ENST00000338700 HEATR6Q6AI08 1181 aaKnown RBP8.21□□□□□ -1.1
TRIM2-201ENST00000338700 CC2D1AQ6P1N0 951 aaPredicted RBP8.21□□□□□ -1.1
TRIM2-201ENST00000338700 TRIM4Q9C037 500 aa8.21□□□□□ -1.1
TRIM2-201ENST00000338700 PARVAQ9NVD7 372 aa8.21□□□□□ -1.1
TRIM2-201ENST00000338700 TPX2Q9ULW0 747 aaKnown RBP8.21□□□□□ -1.1
TRIM2-201ENST00000338700 TRIM17Q9Y577 477 aa8.21□□□□□ -1.1
TRIM2-201ENST00000338700 TMEM247A6NEH6 219 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 DYNC1LI2O43237 492 aaPredicted RBP8.2□□□□□ -1.1
TRIM2-201ENST00000338700 SMARCA1P28370 1054 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 RFC5P40937 340 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 SESN3P58005 492 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 CDK17Q00537 523 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 GFPT1Q06210 699 aaPredicted RBP8.2□□□□□ -1.1
TRIM2-201ENST00000338700 CXCL9Q07325 125 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 ACCSLQ4AC99 568 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 FAM102AQ5T9C2 384 aaPredicted RBP8.2□□□□□ -1.1
TRIM2-201ENST00000338700 CHST13Q8NET6 341 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 ZC3H15Q8WU90 426 aaKnown RBP8.2□□□□□ -1.1
TRIM2-201ENST00000338700 EXOC4Q96A65 974 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 HEMGNQ9BXL5 484 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 PDS5AQ29RF7 1337 aaKnown RBP8.2□□□□□ -1.1
TRIM2-201ENST00000338700 PP2D1A8MPX8 630 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 SEC31AO94979 1220 aaKnown RBP8.2□□□□□ -1.1
TRIM2-201ENST00000338700 HSPA4LO95757 839 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 GRIK1P39086 918 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 SLC7A5Q01650 507 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 WNT8AQ9H1J5 351 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 POLD4Q9HCU8 107 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 DYRK4Q9NR20 520 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 PDXKO00764 312 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 ASAP2O43150 1006 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 KRT38O76015 456 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 CYBBP04839 570 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 NCF2P19878 526 aaPredicted RBP8.2□□□□□ -1.1
TRIM2-201ENST00000338700 INHBEP58166 350 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 CDR2Q01850 454 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 ROR1Q01973 937 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 AP1B1Q10567 949 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 NNTQ13423 1086 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 KCNB1Q14721 858 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 KLHL38Q2WGJ6 581 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 EFHBQ8N7U6 833 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 APPL2Q8NEU8 664 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 ASIC4Q96FT7 647 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 NOVA2Q9UNW9 492 aaKnown RBP8.2□□□□□ -1.1
TRIM2-201ENST00000338700 KPNA7A9QM74 516 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 COPEO14579 308 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 FTLP02792 175 aaPredicted RBP8.2□□□□□ -1.1
TRIM2-201ENST00000338700 CLTAP09496 248 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 C6orf222P0C671 652 aaPredicted RBP8.2□□□□□ -1.1
TRIM2-201ENST00000338700 STILQ15468 1287 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.2□□□□□ -1.1
TRIM2-201ENST00000338700 TTC23LQ6PF05 361 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 TTC8Q8TAM2 541 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 N4BP2L2Q92802 583 aaPredicted RBP8.2□□□□□ -1.1
TRIM2-201ENST00000338700 PPWD1Q96BP3 646 aaKnown RBP8.2□□□□□ -1.1
TRIM2-201ENST00000338700 SERPINI1Q99574 410 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 GLIS2Q9BZE0 524 aaPredicted RBP8.2□□□□□ -1.1
TRIM2-201ENST00000338700 TRIM15Q9C019 465 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 KCND2Q9NZV8 630 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 PCSK1NQ9UHG2 260 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 TADA2AO75478 443 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 MOCS2O96007 188 aaPredicted RBP8.2□□□□□ -1.1
TRIM2-201ENST00000338700 LCP1P13796 627 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 CCDC92Q53HC0 331 aaPredicted RBP8.2□□□□□ -1.1
TRIM2-201ENST00000338700 CRLF3Q8IUI8 442 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 RHOT1Q8IXI2 618 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 SCYL3Q8IZE3 742 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 GIPC2Q8TF65 315 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 CCDC124Q96CT7 223 aaKnown RBP8.2□□□□□ -1.1
TRIM2-201ENST00000338700 EDEM3Q9BZQ6 932 aa8.2□□□□□ -1.1
TRIM2-201ENST00000338700 TMEM39BQ9GZU3 492 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms