RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 WHAMMP3Q1A5X7 153 aa17.6■□□□□ 0.41
HPS1-202ENST00000338546 TMEM63BQ5T3F8 832 aa17.6■□□□□ 0.41
HPS1-202ENST00000338546 EFCAB12Q6NXP0 572 aa17.6■□□□□ 0.41
HPS1-202ENST00000338546 GJB7Q6PEY0 223 aa17.6■□□□□ 0.41
HPS1-202ENST00000338546 C15orf39Q6ZRI6 1047 aa17.6■□□□□ 0.41
HPS1-202ENST00000338546 IFNLR1Q8IU57 520 aaPredicted RBP17.6■□□□□ 0.41
HPS1-202ENST00000338546 NPLOC4Q8TAT6 608 aa17.6■□□□□ 0.41
HPS1-202ENST00000338546 CCDC127Q96BQ5 260 aa17.6■□□□□ 0.41
HPS1-202ENST00000338546 C16orf70Q9BSU1 422 aa17.6■□□□□ 0.41
HPS1-202ENST00000338546 MSTO1Q9BUK6 570 aa17.6■□□□□ 0.41
HPS1-202ENST00000338546 TARS2Q9BW92 718 aaKnown RBP17.6■□□□□ 0.41
HPS1-202ENST00000338546 ZFYVE28Q9HCC9 887 aa17.6■□□□□ 0.41
HPS1-202ENST00000338546 UBE2TQ9NPD8 197 aaPredicted RBP17.6■□□□□ 0.41
HPS1-202ENST00000338546 JRKLQ9Y4A0 524 aa17.6■□□□□ 0.41
HPS1-202ENST00000338546 ACKR2O00590 384 aa17.59■□□□□ 0.41
HPS1-202ENST00000338546 INSRRP14616 1297 aa17.59■□□□□ 0.41
HPS1-202ENST00000338546 SMPD1P17405 629 aa17.59■□□□□ 0.41
HPS1-202ENST00000338546 TMOD1P28289 359 aa17.59■□□□□ 0.41
HPS1-202ENST00000338546 MFAP3P55082 362 aa17.59■□□□□ 0.41
HPS1-202ENST00000338546 PTENP60484 403 aa17.59■□□□□ 0.41
HPS1-202ENST00000338546 AMPD2Q01433 879 aa17.59■□□□□ 0.41
HPS1-202ENST00000338546 SURF1Q15526 300 aa17.59■□□□□ 0.41
HPS1-202ENST00000338546 DGKDQ16760 1214 aa17.59■□□□□ 0.41
HPS1-202ENST00000338546 OLFML2BQ68BL8 750 aa17.59■□□□□ 0.41
HPS1-202ENST00000338546 SV2AQ7L0J3 742 aa17.59■□□□□ 0.41
HPS1-202ENST00000338546 LINC01465Q8N7H1 131 aa17.59■□□□□ 0.41
HPS1-202ENST00000338546 RNF149Q8NC42 400 aa17.59■□□□□ 0.41
HPS1-202ENST00000338546 USP6NLQ92738 828 aa17.59■□□□□ 0.41
HPS1-202ENST00000338546 HHIPL1Q96JK4 782 aa17.59■□□□□ 0.41
HPS1-202ENST00000338546 NOX5Q96PH1 765 aa17.59■□□□□ 0.41
HPS1-202ENST00000338546 FNBP1Q96RU3 617 aa17.59■□□□□ 0.41
HPS1-202ENST00000338546 FZD8Q9H461 694 aa17.59■□□□□ 0.41
HPS1-202ENST00000338546 RNPEPQ9H4A4 650 aa17.59■□□□□ 0.41
HPS1-202ENST00000338546 RAB20Q9NX57 234 aa17.59■□□□□ 0.41
HPS1-202ENST00000338546 NAGPAQ9UK23 515 aa17.59■□□□□ 0.41
HPS1-202ENST00000338546 TLL2Q9Y6L7 1015 aa17.59■□□□□ 0.41
HPS1-202ENST00000338546 CLDN3O15551 220 aa17.58■□□□□ 0.41
HPS1-202ENST00000338546 PRKCBP05771 671 aa17.58■□□□□ 0.41
HPS1-202ENST00000338546 PRLRP16471 622 aa17.58■□□□□ 0.41
HPS1-202ENST00000338546 FAM187BQ17R55 369 aa17.58■□□□□ 0.41
HPS1-202ENST00000338546 ALKBH5Q6P6C2 394 aaKnown RBP17.58■□□□□ 0.41
HPS1-202ENST00000338546 CRELD2Q6UXH1 353 aaPredicted RBP17.58■□□□□ 0.41
HPS1-202ENST00000338546 TSHZ1Q6ZSZ6 1077 aa17.58■□□□□ 0.41
HPS1-202ENST00000338546 OR6J1Q8NGC5 347 aa17.58■□□□□ 0.41
HPS1-202ENST00000338546 SLC30A5Q8TAD4 765 aa17.58■□□□□ 0.41
HPS1-202ENST00000338546 SOCS4Q8WXH5 440 aa17.58■□□□□ 0.41
HPS1-202ENST00000338546 ANKRD7Q92527 254 aa17.58■□□□□ 0.41
HPS1-202ENST00000338546 NT5C1BQ96P26 610 aa17.58■□□□□ 0.41
HPS1-202ENST00000338546 ACO2Q99798 780 aaKnown RBP17.58■□□□□ 0.41
HPS1-202ENST00000338546 SYT11Q9BT88 431 aa17.58■□□□□ 0.41
HPS1-202ENST00000338546 H3BRB1 525 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 MMP3P08254 477 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 SRGAP2CP0DJJ0 459 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 POU5F1Q01860 360 aaKnown RBP17.57■□□□□ 0.4
HPS1-202ENST00000338546 GCNT1Q02742 428 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 MAP2K1Q02750 393 aaPredicted RBP17.57■□□□□ 0.4
HPS1-202ENST00000338546 TNFAIP2Q03169 654 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 MCL1Q07820 350 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 NCBP1Q09161 790 aaKnown RBP17.57■□□□□ 0.4
HPS1-202ENST00000338546 IFI16Q16666 785 aaKnown RBP17.57■□□□□ 0.4
HPS1-202ENST00000338546 ZACNQ401N2 412 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 TRAPPC11Q7Z392 1133 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 MTERF4Q7Z6M4 381 aaKnown RBP17.57■□□□□ 0.4
HPS1-202ENST00000338546 RHPN2Q8IUC4 686 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 LRRC71Q8N4P6 559 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 CARD6Q9BX69 1037 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 TUT1Q9H6E5 874 aaKnown RBP17.57■□□□□ 0.4
HPS1-202ENST00000338546 PRMT7Q9NVM4 692 aaPredicted RBP17.57■□□□□ 0.4
HPS1-202ENST00000338546 RBAKQ9NYW8 714 aaPredicted RBP17.57■□□□□ 0.4
HPS1-202ENST00000338546 TSKSQ9UJT2 592 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 ZHX1Q9UKY1 873 aaPredicted RBP17.57■□□□□ 0.4
HPS1-202ENST00000338546 Q9Y3F1 56 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 DUSP10Q9Y6W6 482 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 A0A0A6YYK5 440 aaPredicted RBP17.57■□□□□ 0.4
HPS1-202ENST00000338546 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.57■□□□□ 0.4
HPS1-202ENST00000338546 MACROD2A1Z1Q3 448 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 RRN3P2A6NIE6 340 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 FOXN3O00409 490 aaPredicted RBP17.57■□□□□ 0.4
HPS1-202ENST00000338546 TADA3O75528 432 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 DLATP10515 647 aaKnown RBP17.57■□□□□ 0.4
HPS1-202ENST00000338546 PROZP22891 400 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 RGS2P41220 211 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 PHKA2P46019 1235 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 NLRP11P59045 1033 aaKnown RBP17.57■□□□□ 0.4
HPS1-202ENST00000338546 CDC42EP1Q00587 391 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 KIAA0753Q2KHM9 967 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 SRGAP1Q7Z6B7 1085 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 FAM71AQ8IYT1 594 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 CALR3Q96L12 384 aaKnown RBP17.57■□□□□ 0.4
HPS1-202ENST00000338546 HAPLN2Q9GZV7 340 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 TFR2Q9UP52 801 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 SAR1BQ9Y6B6 198 aa17.57■□□□□ 0.4
HPS1-202ENST00000338546 A6NJR5 290 aa17.56■□□□□ 0.4
HPS1-202ENST00000338546 FAM155AB1AL88 458 aaPredicted RBP17.56■□□□□ 0.4
HPS1-202ENST00000338546 OGTO15294 1046 aa17.56■□□□□ 0.4
HPS1-202ENST00000338546 C4BPAP04003 597 aaKnown RBP17.56■□□□□ 0.4
HPS1-202ENST00000338546 KLRC1P26715 233 aa17.56■□□□□ 0.4
HPS1-202ENST00000338546 MATR3P43243 847 aaKnown RBP eCLIP17.56■□□□□ 0.4
HPS1-202ENST00000338546 TM4SF4P48230 202 aa17.56■□□□□ 0.4
HPS1-202ENST00000338546 ARHGAP44Q17R89 818 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms