RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 CAPN11Q9UMQ6 739 aa16.05■□□□□ 0.16
CDK5RAP3-201ENST00000338399 GRIN2DO15399 1336 aa16.04■□□□□ 0.16
CDK5RAP3-201ENST00000338399 SLC9A1P19634 815 aa16.04■□□□□ 0.16
CDK5RAP3-201ENST00000338399 FGFR4P22455 802 aa16.04■□□□□ 0.16
CDK5RAP3-201ENST00000338399 PROZP22891 400 aa16.04■□□□□ 0.16
CDK5RAP3-201ENST00000338399 PPP3CAQ08209 521 aa16.04■□□□□ 0.16
CDK5RAP3-201ENST00000338399 CBWD6Q4V339 395 aa16.04■□□□□ 0.16
CDK5RAP3-201ENST00000338399 CBWD3Q5JTY5 395 aa16.04■□□□□ 0.16
CDK5RAP3-201ENST00000338399 CBWD5Q5RIA9 395 aa16.04■□□□□ 0.16
CDK5RAP3-201ENST00000338399 EEF1DP3Q658K8 133 aa16.04■□□□□ 0.16
CDK5RAP3-201ENST00000338399 MPZL3Q6UWV2 235 aa16.04■□□□□ 0.16
CDK5RAP3-201ENST00000338399 CNGA4Q8IV77 575 aa16.04■□□□□ 0.16
CDK5RAP3-201ENST00000338399 NEK11Q8NG66 645 aa16.04■□□□□ 0.16
CDK5RAP3-201ENST00000338399 PARD3BQ8TEW8 1205 aa16.04■□□□□ 0.16
CDK5RAP3-201ENST00000338399 CPB2Q96IY4 423 aa16.04■□□□□ 0.16
CDK5RAP3-201ENST00000338399 PRIMPOLQ96LW4 560 aa16.04■□□□□ 0.16
CDK5RAP3-201ENST00000338399 GCOM2Q9BZD3 368 aaPredicted RBP16.04■□□□□ 0.16
CDK5RAP3-201ENST00000338399 UNC93B1Q9H1C4 597 aa16.04■□□□□ 0.16
CDK5RAP3-201ENST00000338399 PTPRHQ9HD43 1115 aa16.04■□□□□ 0.16
CDK5RAP3-201ENST00000338399 AGPAT5Q9NUQ2 364 aa16.04■□□□□ 0.16
CDK5RAP3-201ENST00000338399 LUC7L2Q9Y383 392 aaKnown RBP16.04■□□□□ 0.16
CDK5RAP3-201ENST00000338399 CABYRO75952 493 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 MYCP01106 439 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 SKILP12757 684 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 KRT9P35527 623 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 GCLMP48507 274 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 MCCD1P59942 119 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 APBA1Q02410 837 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 MCL1Q07820 350 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 NOLC1Q14978 699 aaKnown RBP eCLIP16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 EXOC3L4Q17RC7 722 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 FIGNQ5HY92 759 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 TAF2Q6P1X5 1199 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 GBP6Q6ZN66 633 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 NME8Q8N427 588 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 TMC2Q8TDI7 906 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 POP1Q99575 1024 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 PYCARDQ9ULZ3 195 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 TNFSF13BQ9Y275 285 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 CNTNAP2Q9UHC6 1331 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 CEP350Q5VT06 3117 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 GTPBP10A4D1E9 387 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 LRRIQ3A6PVS8 624 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 ERLIN2O94905 339 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 ARF4P18085 180 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 MYL7Q01449 175 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 ITGA7Q13683 1181 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 ZNF568Q3ZCX4 644 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 SLC9C1Q4G0N8 1177 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 SESTD1Q86VW0 696 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 PANX2Q96RD6 677 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 TMX1Q9H3N1 280 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 GCNT4Q9P109 453 aa16.03■□□□□ 0.16
CDK5RAP3-201ENST00000338399 BRCA2P51587 3418 aa16.02■□□□□ 0.16
CDK5RAP3-201ENST00000338399 A0A1W2PQJ5 194 aa16.02■□□□□ 0.16
CDK5RAP3-201ENST00000338399 MOXD2PA6NHM9 499 aa16.02■□□□□ 0.16
CDK5RAP3-201ENST00000338399 ESPNB1AK53 854 aa16.02■□□□□ 0.16
CDK5RAP3-201ENST00000338399 OGTO15294 1046 aa16.02■□□□□ 0.16
CDK5RAP3-201ENST00000338399 FAM189A1O60320 539 aa16.02■□□□□ 0.16
CDK5RAP3-201ENST00000338399 TSPAN1O60635 241 aa16.02■□□□□ 0.16
CDK5RAP3-201ENST00000338399 NOL4O94818 638 aa16.02■□□□□ 0.16
CDK5RAP3-201ENST00000338399 DLATP10515 647 aaKnown RBP16.02■□□□□ 0.16
CDK5RAP3-201ENST00000338399 ACTN1P12814 892 aa16.02■□□□□ 0.16
CDK5RAP3-201ENST00000338399 DARSP14868 501 aaKnown RBP16.02■□□□□ 0.16
CDK5RAP3-201ENST00000338399 MSNP26038 577 aaKnown RBP16.02■□□□□ 0.16
CDK5RAP3-201ENST00000338399 PON1P27169 355 aa16.02■□□□□ 0.16
CDK5RAP3-201ENST00000338399 TNFSF9P41273 254 aa16.02■□□□□ 0.16
CDK5RAP3-201ENST00000338399 HSP90AA2PQ14568 343 aaPredicted RBP16.02■□□□□ 0.16
CDK5RAP3-201ENST00000338399 MTFR1Q15390 333 aa16.02■□□□□ 0.16
CDK5RAP3-201ENST00000338399 USP37Q86T82 979 aa16.02■□□□□ 0.16
CDK5RAP3-201ENST00000338399 IQCDQ96DY2 449 aa16.02■□□□□ 0.16
CDK5RAP3-201ENST00000338399 CCDC51Q96ER9 411 aa16.02■□□□□ 0.16
CDK5RAP3-201ENST00000338399 TSEN34Q9BSV6 310 aaKnown RBP16.02■□□□□ 0.16
CDK5RAP3-201ENST00000338399 CDT1Q9H211 546 aa16.02■□□□□ 0.16
CDK5RAP3-201ENST00000338399 ABHD10Q9NUJ1 306 aa16.02■□□□□ 0.16
CDK5RAP3-201ENST00000338399 RBAKQ9NYW8 714 aaPredicted RBP16.02■□□□□ 0.16
CDK5RAP3-201ENST00000338399 NRDCO43847 1150 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 EIF4BP23588 611 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 WNT7BP56706 349 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 ZBED6P86452 979 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 PSMD6Q15008 389 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 DPY19L2P1Q6NXN4 242 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 CATSPER4Q7RTX7 472 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 TMEM139Q8IV31 216 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 THNSL1Q8IYQ7 743 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 ARRDC4Q8NCT1 418 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 CCDC112Q8NEF3 446 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 TMEM40Q8WWA1 233 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 GLT1D1Q96MS3 346 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 BAG1Q99933 345 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 TMEM117Q9H0C3 514 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 PDZD7Q9H5P4 517 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 PDE11AQ9HCR9 933 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 TOPORSQ9NS56 1045 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 STX10O60499 249 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 N4BP1O75113 896 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 CRYBB1P53674 252 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 POLR2FP61218 127 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 OSTNP61366 133 aa16.01■□□□□ 0.15
CDK5RAP3-201ENST00000338399 SNX17Q15036 470 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms