RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 RARAP10276 462 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 CREB1P16220 341 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 KCNA3P22001 575 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 SMTNP53814 917 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 TRAF1Q13077 416 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 SNX1Q13596 522 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 DHX34Q14147 1143 aaKnown RBP13.25□□□□□ -0.29
VPS33B-201ENST00000333371 EPC2Q52LR7 807 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 DAB2IPQ5VWQ8 1189 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 STXBP4Q6ZWJ1 553 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 RHOT2Q8IXI1 618 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 LRRC34Q8IZ02 419 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 EPS8L1Q8TE68 723 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 DHX38Q92620 1227 aaKnown RBP13.25□□□□□ -0.29
VPS33B-201ENST00000333371 SAAL1Q96ER3 474 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 AGBL1Q96MI9 1066 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 ZNF317Q96PQ6 595 aaPredicted RBP13.25□□□□□ -0.29
VPS33B-201ENST00000333371 DDX23Q9BUQ8 820 aaKnown RBP13.25□□□□□ -0.29
VPS33B-201ENST00000333371 TEKT3Q9BXF9 490 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 TMEM117Q9H0C3 514 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 TOPORSQ9NS56 1045 aaPredicted RBP13.25□□□□□ -0.29
VPS33B-201ENST00000333371 HSPBP1Q9NZL4 362 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 SYNGAP1Q96PV0 1343 aa13.25□□□□□ -0.29
VPS33B-201ENST00000333371 SLC16A4O15374 487 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 NUDT17P0C025 328 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 DLATP10515 647 aaKnown RBP13.24□□□□□ -0.29
VPS33B-201ENST00000333371 EIF3BP55884 814 aaKnown RBP13.24□□□□□ -0.29
VPS33B-201ENST00000333371 SPP2Q13103 211 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 LRRC14Q15048 493 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 C2CD6Q53TS8 623 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 SWT1Q5T5J6 900 aaKnown RBP13.24□□□□□ -0.29
VPS33B-201ENST00000333371 LLGL2Q6P1M3 1020 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 HOOK3Q86VS8 718 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 CBWD2Q8IUF1 395 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 UBL4BQ8N7F7 174 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 AGBL3Q8NEM8 1001 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 C1orf54Q8WWF1 131 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 NUP85Q9BW27 656 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 TRIM7Q9C029 511 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 MLXIPLQ9NP71 852 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 GGA2Q9UJY4 613 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 NOCTQ9UK39 431 aaKnown RBP13.24□□□□□ -0.29
VPS33B-201ENST00000333371 DIS3Q9Y2L1 958 aaKnown RBP13.24□□□□□ -0.29
VPS33B-201ENST00000333371 TMX2Q9Y320 296 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 CNTNAP1P78357 1384 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 COL4A5P29400 1685 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 SPOPO43791 374 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 CTNNA2P26232 953 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 MMP13P45452 471 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 B3GNT9Q6UX72 402 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 MIER3Q7Z3K6 550 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 MGARPQ8TDB4 240 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 SLC16A10Q8TF71 515 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 CCT6BQ92526 530 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 HVCN1Q96D96 273 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 ZHX2Q9Y6X8 837 aa13.24□□□□□ -0.29
VPS33B-201ENST00000333371 UBE4BO95155 1302 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 CLDN3O15551 220 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 CHRNA3P32297 505 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 DGKZQ13574 1117 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 SIX1Q15475 284 aaPredicted RBP13.23□□□□□ -0.29
VPS33B-201ENST00000333371 TRIP13Q15645 432 aaPredicted RBP13.23□□□□□ -0.29
VPS33B-201ENST00000333371 LONRF1Q17RB8 773 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 SEL1L2Q5TEA6 688 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 C11orf63Q6NUN7 778 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 FAM228AQ86W67 206 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 LDHDQ86WU2 507 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 FUKQ8N0W3 1084 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 ZNF564Q8TBZ8 553 aaPredicted RBP13.23□□□□□ -0.29
VPS33B-201ENST00000333371 ATG4AQ8WYN0 398 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 ZKSCAN4Q969J2 545 aaPredicted RBP13.23□□□□□ -0.29
VPS33B-201ENST00000333371 PWWP2AQ96N64 755 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 VPS33BQ9H267 617 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 KCNH7Q9NS40 1196 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 RASAL2Q9UJF2 1139 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 RIPK2O43353 540 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 RTN2O75298 545 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 ACSL3O95573 720 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 COILP38432 576 aaPredicted RBP13.23□□□□□ -0.29
VPS33B-201ENST00000333371 MXI1P50539 228 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 PEX3P56589 373 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 SOX10P56693 466 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 FMO1Q01740 532 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 UGCGQ16739 394 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 CYB5D1Q6P9G0 228 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 INTS8Q75QN2 995 aaKnown RBP13.23□□□□□ -0.29
VPS33B-201ENST00000333371 SLC9A9Q8IVB4 645 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 DHX37Q8IY37 1157 aaKnown RBP13.23□□□□□ -0.29
VPS33B-201ENST00000333371 CHURC1Q8WUH1 139 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 CD101Q93033 1021 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 ZNF653Q96CK0 615 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 FAM118BQ9BPY3 351 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 ELAC2Q9BQ52 826 aaKnown RBP13.23□□□□□ -0.29
VPS33B-201ENST00000333371 PIM2Q9P1W9 311 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 CTNNAL1Q9UBT7 734 aa13.23□□□□□ -0.29
VPS33B-201ENST00000333371 NFIBO00712 420 aa13.22□□□□□ -0.29
VPS33B-201ENST00000333371 FKBP1CQ5VVH2 108 aa13.22□□□□□ -0.29
VPS33B-201ENST00000333371 PLA2G4FQ68DD2 849 aa13.22□□□□□ -0.29
VPS33B-201ENST00000333371 SLC13A5Q86YT5 568 aaPredicted RBP13.22□□□□□ -0.29
VPS33B-201ENST00000333371 JDP2Q8WYK2 163 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms