RNA–Protein interactions for RNA: ENST00000332814.6

C11orf88-201, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS P4 TSL 5 BASIC

Gene C11orf88, Length 795 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-201ENST00000332814 AKAP5P24588 427 aa17.97■□□□□ 0.47
C11orf88-201ENST00000332814 LIG4P49917 911 aa17.97■□□□□ 0.47
C11orf88-201ENST00000332814 YARSP54577 528 aaKnown RBP17.97■□□□□ 0.47
C11orf88-201ENST00000332814 ASIC1P78348 528 aa17.97■□□□□ 0.47
C11orf88-201ENST00000332814 SKIV2LQ15477 1246 aaKnown RBP17.97■□□□□ 0.47
C11orf88-201ENST00000332814 CCDC85BQ15834 202 aaPredicted RBP17.97■□□□□ 0.47
C11orf88-201ENST00000332814 TIGD5Q53EQ6 642 aa17.97■□□□□ 0.47
C11orf88-201ENST00000332814 HERC4Q5GLZ8 1057 aaPredicted RBP17.97■□□□□ 0.47
C11orf88-201ENST00000332814 KCNT2Q6UVM3 1135 aa17.97■□□□□ 0.47
C11orf88-201ENST00000332814 MPZL3Q6UWV2 235 aa17.97■□□□□ 0.47
C11orf88-201ENST00000332814 TAS1R3Q7RTX0 852 aa17.97■□□□□ 0.47
C11orf88-201ENST00000332814 ZBTB33Q86T24 672 aa17.97■□□□□ 0.47
C11orf88-201ENST00000332814 MRPL38Q96DV4 380 aaKnown RBP17.97■□□□□ 0.47
C11orf88-201ENST00000332814 GAD1Q99259 594 aa17.97■□□□□ 0.47
C11orf88-201ENST00000332814 ACO2Q99798 780 aaKnown RBP17.97■□□□□ 0.47
C11orf88-201ENST00000332814 CCDC94Q9BW85 323 aaPredicted RBP17.97■□□□□ 0.47
C11orf88-201ENST00000332814 RNF39Q9H2S5 420 aa17.97■□□□□ 0.47
C11orf88-201ENST00000332814 MRPL44Q9H9J2 332 aaKnown RBP17.97■□□□□ 0.47
C11orf88-201ENST00000332814 GDPD2Q9HCC8 539 aa17.97■□□□□ 0.47
C11orf88-201ENST00000332814 PANK4Q9NVE7 773 aa17.97■□□□□ 0.47
C11orf88-201ENST00000332814 ZMYM2Q9UBW7 1377 aa17.96■□□□□ 0.47
C11orf88-201ENST00000332814 ARL5CA6NH57 179 aa17.96■□□□□ 0.47
C11orf88-201ENST00000332814 NR1I2O75469 434 aa17.96■□□□□ 0.47
C11orf88-201ENST00000332814 TOM1L1O75674 476 aa17.96■□□□□ 0.47
C11orf88-201ENST00000332814 MCF2P10911 925 aa17.96■□□□□ 0.47
C11orf88-201ENST00000332814 PFKFB1P16118 471 aa17.96■□□□□ 0.47
C11orf88-201ENST00000332814 POU3F3P20264 500 aaPredicted RBP17.96■□□□□ 0.47
C11orf88-201ENST00000332814 NMT1P30419 496 aaKnown RBP17.96■□□□□ 0.47
C11orf88-201ENST00000332814 SCNN1GP51170 649 aa17.96■□□□□ 0.47
C11orf88-201ENST00000332814 KRT17Q04695 432 aa17.96■□□□□ 0.47
C11orf88-201ENST00000332814 ZPBP2Q6X784 338 aa17.96■□□□□ 0.47
C11orf88-201ENST00000332814 LRRC55Q6ZSA7 311 aa17.96■□□□□ 0.47
C11orf88-201ENST00000332814 CDT1Q9H211 546 aa17.96■□□□□ 0.47
C11orf88-201ENST00000332814 ALG13Q9NP73 1137 aaKnown RBP17.96■□□□□ 0.47
C11orf88-201ENST00000332814 KBTBD4Q9NVX7 518 aa17.96■□□□□ 0.47
C11orf88-201ENST00000332814 SNTG2Q9NY99 539 aa17.96■□□□□ 0.47
C11orf88-201ENST00000332814 SPG21Q9NZD8 308 aa17.96■□□□□ 0.47
C11orf88-201ENST00000332814 PUF60Q9UHX1 559 aaKnown RBP17.96■□□□□ 0.47
C11orf88-201ENST00000332814 TBX20Q9UMR3 447 aa17.96■□□□□ 0.47
C11orf88-201ENST00000332814 PLAGL2Q9UPG8 496 aa17.96■□□□□ 0.47
C11orf88-201ENST00000332814 GDAQ9Y2T3 454 aa17.96■□□□□ 0.47
C11orf88-201ENST00000332814 NLRC5Q86WI3 1866 aa17.96■□□□□ 0.47
C11orf88-201ENST00000332814 FNDC1Q4ZHG4 1894 aaPredicted RBP17.95■□□□□ 0.46
C11orf88-201ENST00000332814 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.95■□□□□ 0.46
C11orf88-201ENST00000332814 A0A1B0GVL5 298 aa17.95■□□□□ 0.46
C11orf88-201ENST00000332814 FGF18O76093 207 aa17.95■□□□□ 0.46
C11orf88-201ENST00000332814 RECQL4O94761 1208 aa17.95■□□□□ 0.46
C11orf88-201ENST00000332814 ITGB1P05556 798 aa17.95■□□□□ 0.46
C11orf88-201ENST00000332814 SYKP43405 635 aa17.95■□□□□ 0.46
C11orf88-201ENST00000332814 NOLC1Q14978 699 aaKnown RBP eCLIP17.95■□□□□ 0.46
C11orf88-201ENST00000332814 STXBP4Q6ZWJ1 553 aa17.95■□□□□ 0.46
C11orf88-201ENST00000332814 FSIP1Q8NA03 581 aa17.95■□□□□ 0.46
C11orf88-201ENST00000332814 MRPS27Q92552 414 aaKnown RBP17.95■□□□□ 0.46
C11orf88-201ENST00000332814 PPP2R3CQ969Q6 453 aa17.95■□□□□ 0.46
C11orf88-201ENST00000332814 HVCN1Q96D96 273 aa17.95■□□□□ 0.46
C11orf88-201ENST00000332814 DNAJC19Q96DA6 116 aa17.95■□□□□ 0.46
C11orf88-201ENST00000332814 TMEM169Q96HH4 297 aa17.95■□□□□ 0.46
C11orf88-201ENST00000332814 ZFP42Q96MM3 310 aa17.95■□□□□ 0.46
C11orf88-201ENST00000332814 TOPORSQ9NS56 1045 aaPredicted RBP17.95■□□□□ 0.46
C11orf88-201ENST00000332814 KLK14Q9P0G3 267 aa17.95■□□□□ 0.46
C11orf88-201ENST00000332814 TBC1D7Q9P0N9 293 aa17.95■□□□□ 0.46
C11orf88-201ENST00000332814 USP25Q9UHP3 1055 aa17.95■□□□□ 0.46
C11orf88-201ENST00000332814 EXOC7Q9UPT5 735 aa17.95■□□□□ 0.46
C11orf88-201ENST00000332814 A0A1W2PQ27 194 aa17.94■□□□□ 0.46
C11orf88-201ENST00000332814 A0A1W2PQ64 194 aa17.94■□□□□ 0.46
C11orf88-201ENST00000332814 A0A1W2PQD8 194 aa17.94■□□□□ 0.46
C11orf88-201ENST00000332814 GRM6O15303 877 aa17.94■□□□□ 0.46
C11orf88-201ENST00000332814 CLDN3O15551 220 aa17.94■□□□□ 0.46
C11orf88-201ENST00000332814 GCNT3O95395 438 aa17.94■□□□□ 0.46
C11orf88-201ENST00000332814 PBX3P40426 434 aa17.94■□□□□ 0.46
C11orf88-201ENST00000332814 AFMP43652 599 aa17.94■□□□□ 0.46
C11orf88-201ENST00000332814 BCAR1P56945 870 aa17.94■□□□□ 0.46
C11orf88-201ENST00000332814 OSTNP61366 133 aa17.94■□□□□ 0.46
C11orf88-201ENST00000332814 UBE3AQ05086 875 aa17.94■□□□□ 0.46
C11orf88-201ENST00000332814 GRIK3Q13003 919 aa17.94■□□□□ 0.46
C11orf88-201ENST00000332814 ALCAMQ13740 583 aa17.94■□□□□ 0.46
C11orf88-201ENST00000332814 MICAL1Q8TDZ2 1067 aa17.94■□□□□ 0.46
C11orf88-201ENST00000332814 CCDC34Q96HJ3 373 aa17.94■□□□□ 0.46
C11orf88-201ENST00000332814 TMEM175Q9BSA9 504 aa17.94■□□□□ 0.46
C11orf88-201ENST00000332814 TRIM9Q9C026 710 aa17.94■□□□□ 0.46
C11orf88-201ENST00000332814 NRDE2Q9H7Z3 1164 aa17.94■□□□□ 0.46
C11orf88-201ENST00000332814 OLFML3Q9NRN5 406 aa17.94■□□□□ 0.46
C11orf88-201ENST00000332814 CHMP5Q9NZZ3 219 aa17.94■□□□□ 0.46
C11orf88-201ENST00000332814 INPPL1O15357 1258 aa17.93■□□□□ 0.46
C11orf88-201ENST00000332814 SLFN14P0C7P3 912 aa17.93■□□□□ 0.46
C11orf88-201ENST00000332814 GRM5P41594 1212 aa17.93■□□□□ 0.46
C11orf88-201ENST00000332814 GTF2BQ00403 316 aa17.93■□□□□ 0.46
C11orf88-201ENST00000332814 COASYQ13057 564 aa17.93■□□□□ 0.46
C11orf88-201ENST00000332814 BMS1Q14692 1282 aaKnown RBP17.93■□□□□ 0.46
C11orf88-201ENST00000332814 MAP4K3Q8IVH8 894 aa17.93■□□□□ 0.46
C11orf88-201ENST00000332814 SLC39A11Q8N1S5 342 aa17.93■□□□□ 0.46
C11orf88-201ENST00000332814 SPPL3Q8TCT6 385 aa17.93■□□□□ 0.46
C11orf88-201ENST00000332814 POF1BQ8WVV4 589 aa17.93■□□□□ 0.46
C11orf88-201ENST00000332814 KCNN1Q92952 543 aa17.93■□□□□ 0.46
C11orf88-201ENST00000332814 ST6GALNAC4Q9H4F1 302 aa17.93■□□□□ 0.46
C11orf88-201ENST00000332814 NSUN3Q9H649 340 aaKnown RBP17.93■□□□□ 0.46
C11orf88-201ENST00000332814 PTPRHQ9HD43 1115 aa17.93■□□□□ 0.46
C11orf88-201ENST00000332814 SERTAD1Q9UHV2 236 aa17.93■□□□□ 0.46
C11orf88-201ENST00000332814 PCDHB13Q9Y5F0 798 aa17.93■□□□□ 0.46
C11orf88-201ENST00000332814 KIAA1671Q9BY89 1806 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms