RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 OR1G1P47890 313 aa19.6■□□□□ 0.73
HDDC3-201ENST00000330334 SCNN1GP51170 649 aa19.6■□□□□ 0.73
HDDC3-201ENST00000330334 PRPF4BQ13523 1007 aaKnown RBP19.6■□□□□ 0.73
HDDC3-201ENST00000330334 IL17AQ16552 155 aa19.6■□□□□ 0.73
HDDC3-201ENST00000330334 KRT79Q5XKE5 535 aa19.6■□□□□ 0.73
HDDC3-201ENST00000330334 DEPTORQ8TB45 409 aa19.6■□□□□ 0.73
HDDC3-201ENST00000330334 SNX29Q8TEQ0 813 aa19.6■□□□□ 0.73
HDDC3-201ENST00000330334 IFT74Q96LB3 600 aa19.6■□□□□ 0.73
HDDC3-201ENST00000330334 RIPOR3Q96MK2 946 aa19.6■□□□□ 0.73
HDDC3-201ENST00000330334 KLHL5Q96PQ7 755 aa19.6■□□□□ 0.73
HDDC3-201ENST00000330334 COLEC11Q9BWP8 271 aa19.6■□□□□ 0.73
HDDC3-201ENST00000330334 DDX19AQ9NUU7 478 aaKnown RBP19.6■□□□□ 0.73
HDDC3-201ENST00000330334 CD2BP2O95400 341 aaKnown RBP19.59■□□□□ 0.73
HDDC3-201ENST00000330334 CNPP09543 421 aaKnown RBP19.59■□□□□ 0.73
HDDC3-201ENST00000330334 AKAP5P24588 427 aa19.59■□□□□ 0.73
HDDC3-201ENST00000330334 MTHFRP42898 656 aa19.59■□□□□ 0.73
HDDC3-201ENST00000330334 GRIK3Q13003 919 aa19.59■□□□□ 0.73
HDDC3-201ENST00000330334 TBC1D32Q96NH3 1257 aa19.59■□□□□ 0.73
HDDC3-201ENST00000330334 RPS6KC1Q96S38 1066 aa19.59■□□□□ 0.73
HDDC3-201ENST00000330334 HERC2P3Q9BVR0 1158 aa19.59■□□□□ 0.73
HDDC3-201ENST00000330334 PDZD7Q9H5P4 517 aa19.59■□□□□ 0.73
HDDC3-201ENST00000330334 CHST7Q9NS84 486 aa19.59■□□□□ 0.73
HDDC3-201ENST00000330334 PRG3Q9Y2Y8 225 aaPredicted RBP19.59■□□□□ 0.73
HDDC3-201ENST00000330334 NR2E1Q9Y466 385 aa19.59■□□□□ 0.73
HDDC3-201ENST00000330334 PRKCBP05771 671 aa19.58■□□□□ 0.72
HDDC3-201ENST00000330334 URODP06132 367 aa19.58■□□□□ 0.72
HDDC3-201ENST00000330334 EPCAMP16422 314 aa19.58■□□□□ 0.72
HDDC3-201ENST00000330334 GJB2P29033 226 aa19.58■□□□□ 0.72
HDDC3-201ENST00000330334 CLCN4P51793 760 aa19.58■□□□□ 0.72
HDDC3-201ENST00000330334 ATP2C1P98194 919 aaPredicted RBP19.58■□□□□ 0.72
HDDC3-201ENST00000330334 ATAT1Q5SQI0 421 aa19.58■□□□□ 0.72
HDDC3-201ENST00000330334 KIAA0319Q5VV43 1072 aa19.58■□□□□ 0.72
HDDC3-201ENST00000330334 MCTP1Q6DN14 999 aa19.58■□□□□ 0.72
HDDC3-201ENST00000330334 BMP8AQ7Z5Y6 402 aa19.58■□□□□ 0.72
HDDC3-201ENST00000330334 CDR2LQ86X02 465 aaPredicted RBP19.58■□□□□ 0.72
HDDC3-201ENST00000330334 ADPGKQ9BRR6 497 aa19.58■□□□□ 0.72
HDDC3-201ENST00000330334 APOL6Q9BWW8 343 aa19.58■□□□□ 0.72
HDDC3-201ENST00000330334 APOL5Q9BWW9 433 aa19.58■□□□□ 0.72
HDDC3-201ENST00000330334 RXFP1Q9HBX9 757 aa19.58■□□□□ 0.72
HDDC3-201ENST00000330334 PARP2Q9UGN5 583 aa19.58■□□□□ 0.72
HDDC3-201ENST00000330334 TTLL13PA6NNM8 815 aa19.57■□□□□ 0.72
HDDC3-201ENST00000330334 H3BQV1 296 aa19.57■□□□□ 0.72
HDDC3-201ENST00000330334 KLRC2P26717 231 aa19.57■□□□□ 0.72
HDDC3-201ENST00000330334 PLA2G5P39877 138 aa19.57■□□□□ 0.72
HDDC3-201ENST00000330334 ZXDAP98168 799 aa19.57■□□□□ 0.72
HDDC3-201ENST00000330334 DSG1Q02413 1049 aa19.57■□□□□ 0.72
HDDC3-201ENST00000330334 HYIQ5T013 277 aa19.57■□□□□ 0.72
HDDC3-201ENST00000330334 ARL6IP4Q66PJ3 421 aaKnown RBP19.57■□□□□ 0.72
HDDC3-201ENST00000330334 KIAA1841Q6NSI8 718 aa19.57■□□□□ 0.72
HDDC3-201ENST00000330334 TAS1R1Q7RTX1 841 aa19.57■□□□□ 0.72
HDDC3-201ENST00000330334 CABP7Q86V35 215 aa19.57■□□□□ 0.72
HDDC3-201ENST00000330334 FBXL18Q96ME1 805 aa19.57■□□□□ 0.72
HDDC3-201ENST00000330334 MMTAG2Q9BU76 263 aaKnown RBP19.57■□□□□ 0.72
HDDC3-201ENST00000330334 TIPINQ9BVW5 301 aa19.57■□□□□ 0.72
HDDC3-201ENST00000330334 C17orf75Q9HAS0 396 aa19.57■□□□□ 0.72
HDDC3-201ENST00000330334 DPP7Q9UHL4 492 aa19.57■□□□□ 0.72
HDDC3-201ENST00000330334 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.57■□□□□ 0.72
HDDC3-201ENST00000330334 PHLPP2Q6ZVD8 1323 aa19.56■□□□□ 0.72
HDDC3-201ENST00000330334 GLUD2P49448 558 aa19.56■□□□□ 0.72
HDDC3-201ENST00000330334 DCAF4L1Q3SXM0 396 aa19.56■□□□□ 0.72
HDDC3-201ENST00000330334 TRIM67Q6ZTA4 783 aa19.56■□□□□ 0.72
HDDC3-201ENST00000330334 MFSD14AQ96MC6 490 aa19.56■□□□□ 0.72
HDDC3-201ENST00000330334 RHOBTB2Q9BYZ6 727 aa19.56■□□□□ 0.72
HDDC3-201ENST00000330334 KCNH6Q9H252 994 aa19.56■□□□□ 0.72
HDDC3-201ENST00000330334 POMKQ9H5K3 350 aa19.56■□□□□ 0.72
HDDC3-201ENST00000330334 SFXN1Q9H9B4 322 aa19.56■□□□□ 0.72
HDDC3-201ENST00000330334 KLK14Q9P0G3 267 aa19.56■□□□□ 0.72
HDDC3-201ENST00000330334 KCNG1Q9UIX4 513 aa19.56■□□□□ 0.72
HDDC3-201ENST00000330334 USTQ9Y2C2 406 aa19.56■□□□□ 0.72
HDDC3-201ENST00000330334 RBM19Q9Y4C8 960 aaKnown RBP19.56■□□□□ 0.72
HDDC3-201ENST00000330334 PP2D1A8MPX8 630 aa19.55■□□□□ 0.72
HDDC3-201ENST00000330334 E9PMD0 336 aa19.55■□□□□ 0.72
HDDC3-201ENST00000330334 K7ERI5 159 aa19.55■□□□□ 0.72
HDDC3-201ENST00000330334 SSBP05455 408 aaKnown RBP eCLIP19.55■□□□□ 0.72
HDDC3-201ENST00000330334 ADH1AP07327 375 aa19.55■□□□□ 0.72
HDDC3-201ENST00000330334 TUSC3Q13454 348 aa19.55■□□□□ 0.72
HDDC3-201ENST00000330334 RARS2Q5T160 578 aaKnown RBP19.55■□□□□ 0.72
HDDC3-201ENST00000330334 NT5DC1Q5TFE4 455 aa19.55■□□□□ 0.72
HDDC3-201ENST00000330334 RINT1Q6NUQ1 792 aa19.55■□□□□ 0.72
HDDC3-201ENST00000330334 CYP26C1Q6V0L0 522 aa19.55■□□□□ 0.72
HDDC3-201ENST00000330334 C15orf39Q6ZRI6 1047 aa19.55■□□□□ 0.72
HDDC3-201ENST00000330334 HFE2Q6ZVN8 426 aa19.55■□□□□ 0.72
HDDC3-201ENST00000330334 C1orf186Q6ZWK4 172 aa19.55■□□□□ 0.72
HDDC3-201ENST00000330334 APBB1IPQ7Z5R6 666 aaPredicted RBP19.55■□□□□ 0.72
HDDC3-201ENST00000330334 GPR149Q86SP6 731 aa19.55■□□□□ 0.72
HDDC3-201ENST00000330334 C12orf76Q8N812 135 aaPredicted RBP19.55■□□□□ 0.72
HDDC3-201ENST00000330334 HDAC7Q8WUI4 952 aa19.55■□□□□ 0.72
HDDC3-201ENST00000330334 DRC1Q96MC2 740 aa19.55■□□□□ 0.72
HDDC3-201ENST00000330334 NTPCRQ9BSD7 190 aaKnown RBP19.55■□□□□ 0.72
HDDC3-201ENST00000330334 TMEM134Q9H6X4 195 aa19.55■□□□□ 0.72
HDDC3-201ENST00000330334 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.55■□□□□ 0.72
HDDC3-201ENST00000330334 SNTG2Q9NY99 539 aa19.55■□□□□ 0.72
HDDC3-201ENST00000330334 ADAM28Q9UKQ2 775 aa19.55■□□□□ 0.72
HDDC3-201ENST00000330334 SMC3Q9UQE7 1217 aa19.55■□□□□ 0.72
HDDC3-201ENST00000330334 TEX28O15482 410 aa19.54■□□□□ 0.72
HDDC3-201ENST00000330334 SLC26A4O43511 780 aa19.54■□□□□ 0.72
HDDC3-201ENST00000330334 PAPLNO95428 1278 aa19.54■□□□□ 0.72
HDDC3-201ENST00000330334 EDN1P05305 212 aa19.54■□□□□ 0.72
HDDC3-201ENST00000330334 THP07101 528 aa19.54■□□□□ 0.72
HDDC3-201ENST00000330334 GUCY2CP25092 1073 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms