RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 PCDHGA5Q9Y5G8 931 aa16.67■□□□□ 0.26
CTHRC1-201ENST00000330295 C4orf47A7E2U8 309 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 HIP1O00291 1037 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 CCL16O15467 120 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 XYLBO75191 536 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 NEFLP07196 543 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 MPLP40238 635 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 OR1G1P47890 313 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 CREMQ03060 361 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 CEP55Q53EZ4 464 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 PPM1LQ5SGD2 360 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 LIN9Q5TKA1 542 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 DAB2IPQ5VWQ8 1189 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 TCEAL6Q6IPX3 200 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 CYB5R4Q7L1T6 521 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 CACNA2D4Q7Z3S7 1137 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 WDR5BQ86VZ2 330 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 PROSER1Q86XN7 944 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 COLGALT2Q8IYK4 626 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 GPR65Q8IYL9 337 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 ING5Q8WYH8 240 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 TCEAL3Q969E4 200 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 SPZ1Q9BXG8 430 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 BRD9Q9H8M2 597 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 VPS45Q9NRW7 570 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 KCNH3Q9ULD8 1083 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 PCDHB2Q9Y5E7 798 aa16.66■□□□□ 0.26
CTHRC1-201ENST00000330295 WDR81Q562E7 1941 aa16.65■□□□□ 0.26
CTHRC1-201ENST00000330295 C8AP07357 584 aa16.65■□□□□ 0.26
CTHRC1-201ENST00000330295 HOXA6P31267 233 aa16.65■□□□□ 0.26
CTHRC1-201ENST00000330295 HOXA9P31269 272 aa16.65■□□□□ 0.26
CTHRC1-201ENST00000330295 PTGDRQ13258 359 aa16.65■□□□□ 0.26
CTHRC1-201ENST00000330295 IMMTQ16891 758 aaKnown RBP16.65■□□□□ 0.26
CTHRC1-201ENST00000330295 COL28A1Q2UY09 1125 aa16.65■□□□□ 0.26
CTHRC1-201ENST00000330295 TANGO2Q6ICL3 276 aa16.65■□□□□ 0.26
CTHRC1-201ENST00000330295 KIAA1211LQ6NV74 962 aa16.65■□□□□ 0.26
CTHRC1-201ENST00000330295 KBTBD6Q86V97 674 aa16.65■□□□□ 0.26
CTHRC1-201ENST00000330295 ELSPBP1Q96BH3 223 aa16.65■□□□□ 0.26
CTHRC1-201ENST00000330295 PIAS3Q9Y6X2 628 aa16.65■□□□□ 0.26
CTHRC1-201ENST00000330295 LAMA1P25391 3075 aa16.65■□□□□ 0.26
CTHRC1-201ENST00000330295 CNTNAP2Q9UHC6 1331 aa16.65■□□□□ 0.26
CTHRC1-201ENST00000330295 TICRRQ7Z2Z1 1910 aa16.64■□□□□ 0.26
CTHRC1-201ENST00000330295 F8W810 466 aa16.64■□□□□ 0.25
CTHRC1-201ENST00000330295 HYAL3O43820 417 aaPredicted RBP16.64■□□□□ 0.25
CTHRC1-201ENST00000330295 CSRP1P21291 193 aaKnown RBP16.64■□□□□ 0.25
CTHRC1-201ENST00000330295 GRM2Q14416 872 aa16.64■□□□□ 0.25
CTHRC1-201ENST00000330295 USP41Q3LFD5 358 aa16.64■□□□□ 0.25
CTHRC1-201ENST00000330295 PABPC1LQ4VXU2 614 aaKnown RBP16.64■□□□□ 0.25
CTHRC1-201ENST00000330295 GAB3Q8WWW8 586 aa16.64■□□□□ 0.25
CTHRC1-201ENST00000330295 MCRS1Q96EZ8 462 aa16.64■□□□□ 0.25
CTHRC1-201ENST00000330295 FAM167AQ96KS9 214 aa16.64■□□□□ 0.25
CTHRC1-201ENST00000330295 SENP2Q9HC62 589 aa16.64■□□□□ 0.25
CTHRC1-201ENST00000330295 DIAPH3Q9NSV4 1193 aa16.64■□□□□ 0.25
CTHRC1-201ENST00000330295 HCFC1R1Q9NWW0 138 aa16.64■□□□□ 0.25
CTHRC1-201ENST00000330295 GDE1Q9NZC3 331 aa16.64■□□□□ 0.25
CTHRC1-201ENST00000330295 UNC79Q9P2D8 2635 aa16.63■□□□□ 0.25
CTHRC1-201ENST00000330295 MEIS1O00470 390 aa16.63■□□□□ 0.25
CTHRC1-201ENST00000330295 DHX15O43143 795 aaKnown RBP16.63■□□□□ 0.25
CTHRC1-201ENST00000330295 RPP40O75818 363 aaKnown RBP16.63■□□□□ 0.25
CTHRC1-201ENST00000330295 MRPL10Q7Z7H8 261 aaKnown RBP16.63■□□□□ 0.25
CTHRC1-201ENST00000330295 IRF7Q92985 503 aa16.63■□□□□ 0.25
CTHRC1-201ENST00000330295 C2orf42Q9NWW7 574 aa16.63■□□□□ 0.25
CTHRC1-201ENST00000330295 CACNA2D2Q9NY47 1150 aa16.63■□□□□ 0.25
CTHRC1-201ENST00000330295 KLK13Q9UKR3 277 aa16.63■□□□□ 0.25
CTHRC1-201ENST00000330295 MRPS23Q9Y3D9 190 aaKnown RBP16.63■□□□□ 0.25
CTHRC1-201ENST00000330295 FREM2Q5SZK8 3169 aa16.63■□□□□ 0.25
CTHRC1-201ENST00000330295 POU2F2P09086 479 aa16.62■□□□□ 0.25
CTHRC1-201ENST00000330295 HOXC13P31276 330 aa16.62■□□□□ 0.25
CTHRC1-201ENST00000330295 CDC42EP1Q00587 391 aa16.62■□□□□ 0.25
CTHRC1-201ENST00000330295 DSC1Q08554 894 aa16.62■□□□□ 0.25
CTHRC1-201ENST00000330295 LRRC32Q14392 662 aa16.62■□□□□ 0.25
CTHRC1-201ENST00000330295 FUT10Q6P4F1 479 aa16.62■□□□□ 0.25
CTHRC1-201ENST00000330295 GLIS3Q8NEA6 775 aa16.62■□□□□ 0.25
CTHRC1-201ENST00000330295 TRMT61BQ9BVS5 477 aaKnown RBP16.62■□□□□ 0.25
CTHRC1-201ENST00000330295 GPR62Q9BZJ7 368 aa16.62■□□□□ 0.25
CTHRC1-201ENST00000330295 ZNF334Q9HCZ1 680 aaPredicted RBP16.62■□□□□ 0.25
CTHRC1-201ENST00000330295 TRPV5Q9NQA5 729 aa16.62■□□□□ 0.25
CTHRC1-201ENST00000330295 RBM12Q9NTZ6 932 aaKnown RBP16.62■□□□□ 0.25
CTHRC1-201ENST00000330295 DNMT3BQ9UBC3 853 aaKnown RBP16.62■□□□□ 0.25
CTHRC1-201ENST00000330295 GABBR1Q9UBS5 961 aa16.62■□□□□ 0.25
CTHRC1-201ENST00000330295 SSUH2Q9Y2M2 353 aa16.62■□□□□ 0.25
CTHRC1-201ENST00000330295 A0A087WZ62 844 aa16.61■□□□□ 0.25
CTHRC1-201ENST00000330295 IFIT3O14879 490 aaKnown RBP16.61■□□□□ 0.25
CTHRC1-201ENST00000330295 CAPNS1P04632 268 aa16.61■□□□□ 0.25
CTHRC1-201ENST00000330295 CENPBP07199 599 aaPredicted RBP16.61■□□□□ 0.25
CTHRC1-201ENST00000330295 SDSP20132 328 aa16.61■□□□□ 0.25
CTHRC1-201ENST00000330295 CCNE1P24864 410 aa16.61■□□□□ 0.25
CTHRC1-201ENST00000330295 DRP2Q13474 957 aa16.61■□□□□ 0.25
CTHRC1-201ENST00000330295 PRSS55Q6UWB4 352 aaPredicted RBP16.61■□□□□ 0.25
CTHRC1-201ENST00000330295 Q6ZS52 159 aa16.61■□□□□ 0.25
CTHRC1-201ENST00000330295 CATSPER4Q7RTX7 472 aa16.61■□□□□ 0.25
CTHRC1-201ENST00000330295 FDXACB1Q9BRP7 624 aaPredicted RBP16.61■□□□□ 0.25
CTHRC1-201ENST00000330295 COLEC11Q9BWP8 271 aa16.61■□□□□ 0.25
CTHRC1-201ENST00000330295 INO80BQ9C086 356 aaPredicted RBP16.61■□□□□ 0.25
CTHRC1-201ENST00000330295 ERICH2A1L162 156 aa16.6■□□□□ 0.25
CTHRC1-201ENST00000330295 NR1I2O75469 434 aa16.6■□□□□ 0.25
CTHRC1-201ENST00000330295 PSAPP07602 524 aa16.6■□□□□ 0.25
CTHRC1-201ENST00000330295 FCARP24071 287 aa16.6■□□□□ 0.25
CTHRC1-201ENST00000330295 SMARCA1P28370 1054 aa16.6■□□□□ 0.25
CTHRC1-201ENST00000330295 ZNF746Q6NUN9 644 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms