RNA–Protein interactions for RNA: ENST00000327443.8

SP1-201, Transcript of Sp1 transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SP1, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-201ENST00000327443 SPATA4Q8NEY3 305 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 NUP85Q9BW27 656 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 TANGO6Q9C0B7 1094 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 SH3GLB2Q9NR46 395 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 TBCCD1Q9NVR7 557 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 RBMX2Q9Y388 322 aaKnown RBP10.48□□□□□ -0.73
SP1-201ENST00000327443 ARIH1Q9Y4X5 557 aaPredicted RBP10.48□□□□□ -0.73
SP1-201ENST00000327443 GPC6Q9Y625 555 aaPredicted RBP10.48□□□□□ -0.73
SP1-201ENST00000327443 YDJCA8MPS7 323 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 CPLX1O14810 134 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 HLA-DOAP06340 250 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 LYNP07948 512 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 CDC27P30260 824 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 TXKP42681 527 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 FXR1P51114 621 aaKnown RBP eCLIP10.48□□□□□ -0.73
SP1-201ENST00000327443 MAGOHP61326 146 aaKnown RBP10.48□□□□□ -0.73
SP1-201ENST00000327443 WASHC5Q12768 1159 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 PNOCQ13519 176 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 GRM4Q14833 912 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 NR1I3Q14994 352 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 AOC3Q16853 763 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 COBLL1Q53SF7 1204 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 IFIT1BQ5T764 474 aaKnown RBP10.48□□□□□ -0.73
SP1-201ENST00000327443 NIM1KQ8IY84 436 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 FANCBQ8NB91 859 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 RETREG2Q8NC44 543 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 ZNF280CQ8ND82 737 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 TGFBRAP1Q8WUH2 860 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 UTP4Q969X6 686 aaKnown RBP10.48□□□□□ -0.73
SP1-201ENST00000327443 MAGOHBQ96A72 148 aaKnown RBP10.48□□□□□ -0.73
SP1-201ENST00000327443 ZNF317Q96PQ6 595 aaPredicted RBP10.48□□□□□ -0.73
SP1-201ENST00000327443 CLK4Q9HAZ1 481 aaKnown RBP10.48□□□□□ -0.73
SP1-201ENST00000327443 ZNF304Q9HCX3 659 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 GIT1Q9Y2X7 761 aa10.48□□□□□ -0.73
SP1-201ENST00000327443 SIGLEC16A6NMB1 481 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 RASA4BC9J798 803 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 hCG_1984214I3L0E3 225 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 ASAP2O43150 1006 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 RASA4O43374 803 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 STAM2O75886 525 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 FOSL1P15407 271 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 FUT2Q10981 343 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 DCTN2Q13561 401 aaKnown RBP10.47□□□□□ -0.73
SP1-201ENST00000327443 DOK7Q18PE1 504 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 CTC1Q2NKJ3 1217 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 ANKDD1AQ495B1 522 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 ANO5Q75V66 913 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 FAM83AQ86UY5 434 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 TRIM22Q8IYM9 498 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 TTC8Q8TAM2 541 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 FNDC8Q8TC99 324 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 SCG3Q8WXD2 468 aaKnown RBP10.47□□□□□ -0.73
SP1-201ENST00000327443 SKA1Q96BD8 255 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 PHF12Q96QT6 1004 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 LBHD1Q9BQE6 289 aaPredicted RBP10.47□□□□□ -0.73
SP1-201ENST00000327443 ERP44Q9BS26 406 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 PDGFDQ9GZP0 370 aaPredicted RBP10.47□□□□□ -0.73
SP1-201ENST00000327443 TNFRSF10AO00220 468 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 ADCY3O60266 1144 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 FOXD2O60548 495 aaPredicted RBP10.47□□□□□ -0.73
SP1-201ENST00000327443 USP17L8P0C7I0 530 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 IDEP14735 1019 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 CDK8P49336 464 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 CTAG1AP78358 180 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 MAP3K10Q02779 954 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 GALNTL6Q49A17 601 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 ERMARDQ5T6L9 678 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 ASRGL1Q7L266 308 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 TMTC1Q8IUR5 882 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 CRACR2BQ8N4Y2 399 aaPredicted RBP10.47□□□□□ -0.73
SP1-201ENST00000327443 VPS37AQ8NEZ2 397 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 GAB3Q8WWW8 586 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 IRGQQ8WZA9 623 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 VMP1Q96GC9 406 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 FNBP1Q96RU3 617 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 STK33Q9BYT3 514 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 SAMSN1Q9NSI8 373 aaKnown RBP10.47□□□□□ -0.73
SP1-201ENST00000327443 USP40Q9NVE5 1235 aa10.47□□□□□ -0.73
SP1-201ENST00000327443 REXO2Q9Y3B8 237 aaKnown RBP10.47□□□□□ -0.73
SP1-201ENST00000327443 SFI1A8K8P3 1242 aa10.46□□□□□ -0.73
SP1-201ENST00000327443 NOTOA8MTQ0 251 aa10.46□□□□□ -0.73
SP1-201ENST00000327443 GLI1P08151 1106 aa10.46□□□□□ -0.73
SP1-201ENST00000327443 PRKACBP22694 351 aa10.46□□□□□ -0.73
SP1-201ENST00000327443 KIF23Q02241 960 aaPredicted RBP10.46□□□□□ -0.73
SP1-201ENST00000327443 SSRP1Q08945 709 aaKnown RBP10.46□□□□□ -0.73
SP1-201ENST00000327443 C8orf74Q6P047 294 aa10.46□□□□□ -0.73
SP1-201ENST00000327443 TATDN1Q6P1N9 297 aa10.46□□□□□ -0.73
SP1-201ENST00000327443 TMTC3Q6ZXV5 915 aa10.46□□□□□ -0.73
SP1-201ENST00000327443 ZNF444Q8N0Y2 327 aaPredicted RBP10.46□□□□□ -0.73
SP1-201ENST00000327443 PBKQ96KB5 322 aa10.46□□□□□ -0.73
SP1-201ENST00000327443 FAM129AQ9BZQ8 928 aa10.46□□□□□ -0.73
SP1-201ENST00000327443 AS3MTQ9HBK9 375 aa10.46□□□□□ -0.73
SP1-201ENST00000327443 EPB41L5Q9HCM4 733 aa10.46□□□□□ -0.73
SP1-201ENST00000327443 EHD2Q9NZN4 543 aa10.46□□□□□ -0.73
SP1-201ENST00000327443 SELENONQ9NZV5 590 aa10.46□□□□□ -0.73
SP1-201ENST00000327443 LARSQ9P2J5 1176 aaKnown RBP10.46□□□□□ -0.73
SP1-201ENST00000327443 SAP30BPQ9UHR5 308 aaKnown RBP10.46□□□□□ -0.73
SP1-201ENST00000327443 A0A1W2PQ27 194 aa10.46□□□□□ -0.74
SP1-201ENST00000327443 A0A1W2PQ64 194 aa10.46□□□□□ -0.74
SP1-201ENST00000327443 A0A1W2PQD8 194 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms