RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 TOM1L1O75674 476 aa13.87□□□□□ -0.19
DDX39A-202ENST00000324340 RPLP2P05387 115 aaKnown RBP13.87□□□□□ -0.19
DDX39A-202ENST00000324340 IVLP07476 585 aa13.87□□□□□ -0.19
DDX39A-202ENST00000324340 IQCF3P0C7M6 154 aa13.87□□□□□ -0.19
DDX39A-202ENST00000324340 SKILP12757 684 aa13.87□□□□□ -0.19
DDX39A-202ENST00000324340 PROZP22891 400 aa13.87□□□□□ -0.19
DDX39A-202ENST00000324340 CASQ1P31415 396 aa13.87□□□□□ -0.19
DDX39A-202ENST00000324340 ACLYP53396 1101 aa13.87□□□□□ -0.19
DDX39A-202ENST00000324340 NLRP11P59045 1033 aaKnown RBP13.87□□□□□ -0.19
DDX39A-202ENST00000324340 ZNF200P98182 395 aaPredicted RBP13.87□□□□□ -0.19
DDX39A-202ENST00000324340 PTPN11Q06124 597 aaPredicted RBP13.87□□□□□ -0.19
DDX39A-202ENST00000324340 PCBP1Q15365 356 aaKnown RBP eCLIP13.87□□□□□ -0.19
DDX39A-202ENST00000324340 FKBP15Q5T1M5 1219 aa13.87□□□□□ -0.19
DDX39A-202ENST00000324340 INTS8Q75QN2 995 aaKnown RBP13.87□□□□□ -0.19
DDX39A-202ENST00000324340 RPAINQ86UA6 219 aa13.87□□□□□ -0.19
DDX39A-202ENST00000324340 GPD1LQ8N335 351 aa13.87□□□□□ -0.19
DDX39A-202ENST00000324340 SH3TC2Q8TF17 1288 aa13.87□□□□□ -0.19
DDX39A-202ENST00000324340 PPP1R13LQ8WUF5 828 aa13.87□□□□□ -0.19
DDX39A-202ENST00000324340 POMGNT1Q8WZA1 660 aa13.87□□□□□ -0.19
DDX39A-202ENST00000324340 ACO2Q99798 780 aaKnown RBP13.87□□□□□ -0.19
DDX39A-202ENST00000324340 HAPLN2Q9GZV7 340 aa13.87□□□□□ -0.19
DDX39A-202ENST00000324340 KIAA1586Q9HCI6 787 aa13.87□□□□□ -0.19
DDX39A-202ENST00000324340 PTPRHQ9HD43 1115 aa13.87□□□□□ -0.19
DDX39A-202ENST00000324340 PCNTO95613 3336 aa13.87□□□□□ -0.19
DDX39A-202ENST00000324340 CNTNAP2Q9UHC6 1331 aa13.87□□□□□ -0.19
DDX39A-202ENST00000324340 TTLL13PA6NNM8 815 aa13.86□□□□□ -0.19
DDX39A-202ENST00000324340 INO80B-WBP1J3KQ70 363 aa13.86□□□□□ -0.19
DDX39A-202ENST00000324340 RPS6KA5O75582 802 aa13.86□□□□□ -0.19
DDX39A-202ENST00000324340 NOP2P46087 812 aaKnown RBP13.86□□□□□ -0.19
DDX39A-202ENST00000324340 PLA2G4AP47712 749 aa13.86□□□□□ -0.19
DDX39A-202ENST00000324340 TUBB4BP68371 445 aa13.86□□□□□ -0.19
DDX39A-202ENST00000324340 CCZ1BP86790 482 aa13.86□□□□□ -0.19
DDX39A-202ENST00000324340 CCZ1P86791 482 aaPredicted RBP13.86□□□□□ -0.19
DDX39A-202ENST00000324340 KCNH2Q12809 1159 aa13.86□□□□□ -0.19
DDX39A-202ENST00000324340 BFSP1Q12934 665 aa13.86□□□□□ -0.19
DDX39A-202ENST00000324340 PRPF4BQ13523 1007 aaKnown RBP13.86□□□□□ -0.19
DDX39A-202ENST00000324340 SNRNP35Q16560 246 aaKnown RBP13.86□□□□□ -0.19
DDX39A-202ENST00000324340 AMHR2Q16671 573 aa13.86□□□□□ -0.19
DDX39A-202ENST00000324340 PTPN21Q16825 1174 aa13.86□□□□□ -0.19
DDX39A-202ENST00000324340 SERINC5Q86VE9 423 aa13.86□□□□□ -0.19
DDX39A-202ENST00000324340 ARRDC4Q8NCT1 418 aa13.86□□□□□ -0.19
DDX39A-202ENST00000324340 ZSWIM2Q8NEG5 633 aa13.86□□□□□ -0.19
DDX39A-202ENST00000324340 MFSD14AQ96MC6 490 aa13.86□□□□□ -0.19
DDX39A-202ENST00000324340 INO80BQ9C086 356 aaPredicted RBP13.86□□□□□ -0.19
DDX39A-202ENST00000324340 FAM49AQ9H0Q0 323 aaPredicted RBP13.86□□□□□ -0.19
DDX39A-202ENST00000324340 UNC93B1Q9H1C4 597 aa13.86□□□□□ -0.19
DDX39A-202ENST00000324340 TNFSF13BQ9Y275 285 aa13.86□□□□□ -0.19
DDX39A-202ENST00000324340 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.86□□□□□ -0.197e-8■■□□□ 13.5
DDX39A-202ENST00000324340 TRIP12Q14669 1992 aaPredicted RBP13.86□□□□□ -0.19
DDX39A-202ENST00000324340 ERICH4A6NGS2 130 aa13.85□□□□□ -0.19
DDX39A-202ENST00000324340 EXTL3O43909 919 aa13.85□□□□□ -0.19
DDX39A-202ENST00000324340 FAM189A1O60320 539 aa13.85□□□□□ -0.19
DDX39A-202ENST00000324340 LDHAP00338 332 aaKnown RBP13.85□□□□□ -0.19
DDX39A-202ENST00000324340 AFPP02771 609 aaKnown RBP13.85□□□□□ -0.19
DDX39A-202ENST00000324340 HSPA8P11142 646 aaKnown RBP13.85□□□□□ -0.19
DDX39A-202ENST00000324340 CLCN6P51797 869 aa13.85□□□□□ -0.19
DDX39A-202ENST00000324340 MCL1Q07820 350 aa13.85□□□□□ -0.19
DDX39A-202ENST00000324340 ITGA7Q13683 1181 aa13.85□□□□□ -0.19
DDX39A-202ENST00000324340 TRIM14Q14142 442 aa13.85□□□□□ -0.19
DDX39A-202ENST00000324340 SLC9C1Q4G0N8 1177 aa13.85□□□□□ -0.19
DDX39A-202ENST00000324340 FIGNQ5HY92 759 aa13.85□□□□□ -0.19
DDX39A-202ENST00000324340 GDF6Q6KF10 455 aaPredicted RBP13.85□□□□□ -0.19
DDX39A-202ENST00000324340 CBWD2Q8IUF1 395 aa13.85□□□□□ -0.19
DDX39A-202ENST00000324340 DNAJB3Q8WWF6 145 aa13.85□□□□□ -0.19
DDX39A-202ENST00000324340 NLRP7Q8WX94 980 aa13.85□□□□□ -0.19
DDX39A-202ENST00000324340 SAAL1Q96ER3 474 aa13.85□□□□□ -0.19
DDX39A-202ENST00000324340 ZNF668Q96K58 619 aaPredicted RBP13.85□□□□□ -0.19
DDX39A-202ENST00000324340 ZBTB45Q96K62 511 aaPredicted RBP13.85□□□□□ -0.19
DDX39A-202ENST00000324340 GCOM2Q9BZD3 368 aaPredicted RBP13.85□□□□□ -0.19
DDX39A-202ENST00000324340 AGO2Q9UKV8 859 aaKnown RBP13.85□□□□□ -0.19
DDX39A-202ENST00000324340 PHF24Q9UPV7 400 aa13.85□□□□□ -0.19
DDX39A-202ENST00000324340 SIK3Q9Y2K2 1263 aa13.85□□□□□ -0.19
DDX39A-202ENST00000324340 USP20Q9Y2K6 914 aa13.85□□□□□ -0.19
DDX39A-202ENST00000324340 GTPBP10A4D1E9 387 aaKnown RBP13.84□□□□□ -0.19
DDX39A-202ENST00000324340 EFCAB8A8MWE9 144 aa13.84□□□□□ -0.19
DDX39A-202ENST00000324340 PMM2O15305 246 aa13.84□□□□□ -0.19
DDX39A-202ENST00000324340 CLDN3O15551 220 aa13.84□□□□□ -0.19
DDX39A-202ENST00000324340 ADRB2P07550 413 aa13.84□□□□□ -0.19
DDX39A-202ENST00000324340 KRT13P13646 458 aa13.84□□□□□ -0.19
DDX39A-202ENST00000324340 VAMP7P51809 220 aa13.84□□□□□ -0.19
DDX39A-202ENST00000324340 KCNMA1Q12791 1236 aa13.84□□□□□ -0.19
DDX39A-202ENST00000324340 NAA30Q147X3 362 aaPredicted RBP13.84□□□□□ -0.19
DDX39A-202ENST00000324340 KIZQ2M2Z5 673 aa13.84□□□□□ -0.19
DDX39A-202ENST00000324340 C1orf220Q5T0J3 134 aa13.84□□□□□ -0.19
DDX39A-202ENST00000324340 ATF7IP2Q5U623 682 aa13.84□□□□□ -0.19
DDX39A-202ENST00000324340 MPZL3Q6UWV2 235 aa13.84□□□□□ -0.19
DDX39A-202ENST00000324340 CRELD2Q6UXH1 353 aaPredicted RBP13.84□□□□□ -0.19
DDX39A-202ENST00000324340 CTU1Q7Z7A3 348 aaKnown RBP13.84□□□□□ -0.19
DDX39A-202ENST00000324340 SLC43A3Q8NBI5 491 aa13.84□□□□□ -0.19
DDX39A-202ENST00000324340 RDH13Q8NBN7 331 aa13.84□□□□□ -0.19
DDX39A-202ENST00000324340 TMC2Q8TDI7 906 aa13.84□□□□□ -0.19
DDX39A-202ENST00000324340 IQCDQ96DY2 449 aa13.84□□□□□ -0.19
DDX39A-202ENST00000324340 GLT1D1Q96MS3 346 aa13.84□□□□□ -0.19
DDX39A-202ENST00000324340 NUP58Q9BVL2 599 aa13.84□□□□□ -0.19
DDX39A-202ENST00000324340 SEZ6LQ9BYH1 1024 aa13.84□□□□□ -0.19
DDX39A-202ENST00000324340 A0A1W2PQ45 241 aaPredicted RBP13.83□□□□□ -0.19
DDX39A-202ENST00000324340 A0A1W2PQY0 241 aa13.83□□□□□ -0.19
DDX39A-202ENST00000324340 GOLGA8IPA6NC78 632 aa13.83□□□□□ -0.19
DDX39A-202ENST00000324340 ZNF233A6NK53 670 aa13.83□□□□□ -0.19
DDX39A-202ENST00000324340 GOLGA8JA6NMD2 632 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms