RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 DYNC1I1O14576 645 aa19.99■□□□□ 0.79
USP39-201ENST00000323701 ABLIM1O14639 778 aa19.99■□□□□ 0.79
USP39-201ENST00000323701 AKR1B10O60218 316 aa19.99■□□□□ 0.79
USP39-201ENST00000323701 FAM189A1O60320 539 aa19.99■□□□□ 0.79
USP39-201ENST00000323701 VTNP04004 478 aa19.99■□□□□ 0.79
USP39-201ENST00000323701 HARSP12081 509 aaKnown RBP19.99■□□□□ 0.79
USP39-201ENST00000323701 ASIC2Q16515 512 aa19.99■□□□□ 0.79
USP39-201ENST00000323701 SLC9C1Q4G0N8 1177 aa19.99■□□□□ 0.79
USP39-201ENST00000323701 SCARA3Q6AZY7 606 aa19.99■□□□□ 0.79
USP39-201ENST00000323701 ZNF571Q7Z3V5 609 aaPredicted RBP19.99■□□□□ 0.79
USP39-201ENST00000323701 TLK2Q86UE8 772 aa19.99■□□□□ 0.79
USP39-201ENST00000323701 KAT2BQ92831 832 aa19.99■□□□□ 0.79
USP39-201ENST00000323701 APBA2Q99767 749 aa19.99■□□□□ 0.79
USP39-201ENST00000323701 DEF6Q9H4E7 631 aa19.99■□□□□ 0.79
USP39-201ENST00000323701 PDE11AQ9HCR9 933 aa19.99■□□□□ 0.79
USP39-201ENST00000323701 SSU72P8A0A1W2PR75 194 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 F8VZ95 297 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 PRKCBP05771 671 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 TNFSF9P41273 254 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 EFNA5P52803 228 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 KLHL30Q0D2K2 578 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 DRAP1Q14919 205 aaPredicted RBP19.98■□□□□ 0.79
USP39-201ENST00000323701 MTHFD1LQ6UB35 978 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 ZBTB33Q86T24 672 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 DNAAF5Q86Y56 855 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 TRPV1Q8NER1 839 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 OLIG1Q8TAK6 271 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 TMC2Q8TDI7 906 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 TAS1R2Q8TE23 839 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 HHIPL1Q96JK4 782 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 ACO2Q99798 780 aaKnown RBP19.98■□□□□ 0.79
USP39-201ENST00000323701 MSTO1Q9BUK6 570 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 PCDHA13Q9Y5I0 950 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 A0A087X0T9 212 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 ZNF233A6NK53 670 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 GFPT2O94808 682 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 FAM228BP0C875 321 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 ABCD1P33897 745 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 KRT83P78385 493 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 HIC1Q14526 733 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 GRIK4Q16099 956 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 ARHGAP44Q17R89 818 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 ZNF569Q5MCW4 686 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 SV2AQ7L0J3 742 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 SETD4Q9NVD3 440 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 ADAMTS1Q9UHI8 967 aa19.98■□□□□ 0.79
USP39-201ENST00000323701 ZNF215Q9UL58 517 aaPredicted RBP19.98■□□□□ 0.79
USP39-201ENST00000323701 TBC1D8O95759 1140 aa19.97■□□□□ 0.79
USP39-201ENST00000323701 MATR3P43243 847 aaKnown RBP eCLIP19.97■□□□□ 0.79
USP39-201ENST00000323701 PSMC4P43686 418 aa19.97■□□□□ 0.79
USP39-201ENST00000323701 PTENP60484 403 aa19.97■□□□□ 0.79
USP39-201ENST00000323701 BEX3Q00994 111 aa19.97■□□□□ 0.79
USP39-201ENST00000323701 MBTD1Q05BQ5 628 aa19.97■□□□□ 0.79
USP39-201ENST00000323701 PPFIA1Q13136 1202 aa19.97■□□□□ 0.79
USP39-201ENST00000323701 CCDC122Q5T0U0 273 aa19.97■□□□□ 0.79
USP39-201ENST00000323701 KIAA1328Q86T90 577 aa19.97■□□□□ 0.79
USP39-201ENST00000323701 EXOC8Q8IYI6 725 aa19.97■□□□□ 0.79
USP39-201ENST00000323701 JPH2Q9BR39 696 aaPredicted RBP19.97■□□□□ 0.79
USP39-201ENST00000323701 STK33Q9BYT3 514 aa19.97■□□□□ 0.79
USP39-201ENST00000323701 IFIH1Q9BYX4 1025 aaKnown RBP19.97■□□□□ 0.79
USP39-201ENST00000323701 MGAMO43451 1857 aa19.97■□□□□ 0.79
USP39-201ENST00000323701 A0A087WZ62 844 aa19.97■□□□□ 0.79
USP39-201ENST00000323701 INO80B-WBP1J3KQ70 363 aa19.97■□□□□ 0.79
USP39-201ENST00000323701 P4HA2O15460 535 aa19.97■□□□□ 0.79
USP39-201ENST00000323701 SCP2P22307 547 aa19.97■□□□□ 0.79
USP39-201ENST00000323701 MAPK6Q16659 721 aa19.97■□□□□ 0.79
USP39-201ENST00000323701 KRT39Q6A163 491 aa19.97■□□□□ 0.79
USP39-201ENST00000323701 SLC35F6Q8N357 371 aa19.97■□□□□ 0.79
USP39-201ENST00000323701 LRRN4CLQ8ND94 238 aa19.97■□□□□ 0.79
USP39-201ENST00000323701 SOCS4Q8WXH5 440 aa19.97■□□□□ 0.79
USP39-201ENST00000323701 JAKMIP2Q96AA8 810 aa19.97■□□□□ 0.79
USP39-201ENST00000323701 FDXACB1Q9BRP7 624 aaPredicted RBP19.97■□□□□ 0.79
USP39-201ENST00000323701 INO80BQ9C086 356 aaPredicted RBP19.97■□□□□ 0.79
USP39-201ENST00000323701 FZD8Q9H461 694 aa19.97■□□□□ 0.79
USP39-201ENST00000323701 TMEM8AQ9HCN3 771 aa19.97■□□□□ 0.79
USP39-201ENST00000323701 UBE2TQ9NPD8 197 aaPredicted RBP19.97■□□□□ 0.79
USP39-201ENST00000323701 FOXN3O00409 490 aaPredicted RBP19.96■□□□□ 0.79
USP39-201ENST00000323701 PMM2O15305 246 aa19.96■□□□□ 0.79
USP39-201ENST00000323701 CLDN3O15551 220 aa19.96■□□□□ 0.79
USP39-201ENST00000323701 EVI5O60447 810 aa19.96■□□□□ 0.79
USP39-201ENST00000323701 VAV2P52735 878 aa19.96■□□□□ 0.79
USP39-201ENST00000323701 SPA17Q15506 151 aa19.96■□□□□ 0.79
USP39-201ENST00000323701 EEF1DP3Q658K8 133 aa19.96■□□□□ 0.79
USP39-201ENST00000323701 SLFN12LQ6IEE8 588 aa19.96■□□□□ 0.79
USP39-201ENST00000323701 ZPBP2Q6X784 338 aa19.96■□□□□ 0.79
USP39-201ENST00000323701 ZBTB8OSQ8IWT0 167 aa19.96■□□□□ 0.79
USP39-201ENST00000323701 MRPL4Q9BYD3 311 aaKnown RBP19.96■□□□□ 0.79
USP39-201ENST00000323701 SALL4Q9UJQ4 1053 aa19.96■□□□□ 0.79
USP39-201ENST00000323701 MYO6Q9UM54 1294 aa19.96■□□□□ 0.79
USP39-201ENST00000323701 COQ4Q9Y3A0 265 aa19.96■□□□□ 0.79
USP39-201ENST00000323701 KIF5CO60282 957 aa19.95■□□□□ 0.78
USP39-201ENST00000323701 N4BP1O75113 896 aaKnown RBP19.95■□□□□ 0.78
USP39-201ENST00000323701 TOM1L1O75674 476 aa19.95■□□□□ 0.78
USP39-201ENST00000323701 TUBB4AP04350 444 aa19.95■□□□□ 0.78
USP39-201ENST00000323701 CLDN10P78369 228 aa19.95■□□□□ 0.78
USP39-201ENST00000323701 PSMD6Q15008 389 aa19.95■□□□□ 0.78
USP39-201ENST00000323701 C15orf39Q6ZRI6 1047 aa19.95■□□□□ 0.78
USP39-201ENST00000323701 LMBR1Q8WVP7 490 aa19.95■□□□□ 0.78
USP39-201ENST00000323701 PI4K2AQ9BTU6 479 aa19.95■□□□□ 0.78
USP39-201ENST00000323701 PTPRHQ9HD43 1115 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms