RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 PDE11AQ9HCR9 933 aa8.18□□□□□ -1.1
IFT88-201ENST00000319980 RAB20Q9NX57 234 aa8.18□□□□□ -1.1
IFT88-201ENST00000319980 RBPJLQ9UBG7 517 aa8.18□□□□□ -1.1
IFT88-201ENST00000319980 AGTPBP1Q9UPW5 1226 aa8.18□□□□□ -1.1
IFT88-201ENST00000319980 ZNF233A6NK53 670 aa8.18□□□□□ -1.1
IFT88-201ENST00000319980 H0YCG3 227 aa8.18□□□□□ -1.1
IFT88-201ENST00000319980 PMM2O15305 246 aa8.18□□□□□ -1.1
IFT88-201ENST00000319980 CYP26A1O43174 497 aa8.18□□□□□ -1.1
IFT88-201ENST00000319980 CNMDO75829 334 aa8.18□□□□□ -1.1
IFT88-201ENST00000319980 SGPL1O95470 568 aa8.18□□□□□ -1.1
IFT88-201ENST00000319980 TGFB3P10600 412 aa8.18□□□□□ -1.1
IFT88-201ENST00000319980 GARTP22102 1010 aa8.18□□□□□ -1.1
IFT88-201ENST00000319980 BRD2P25440 801 aaKnown RBP8.18□□□□□ -1.1
IFT88-201ENST00000319980 MARK3P27448 753 aa8.18□□□□□ -1.1
IFT88-201ENST00000319980 EPHX2P34913 555 aa8.18□□□□□ -1.1
IFT88-201ENST00000319980 ACOT2P49753 483 aa8.18□□□□□ -1.1
IFT88-201ENST00000319980 APLP1P51693 650 aa8.18□□□□□ -1.1
IFT88-201ENST00000319980 EAPPQ56P03 285 aaPredicted RBP8.18□□□□□ -1.1
IFT88-201ENST00000319980 LMBRD2Q68DH5 695 aaPredicted RBP8.18□□□□□ -1.1
IFT88-201ENST00000319980 C8orf74Q6P047 294 aa8.18□□□□□ -1.1
IFT88-201ENST00000319980 DEPTORQ8TB45 409 aa8.18□□□□□ -1.1
IFT88-201ENST00000319980 TMC2Q8TDI7 906 aa8.18□□□□□ -1.1
IFT88-201ENST00000319980 ASAP3Q8TDY4 903 aa8.18□□□□□ -1.1
IFT88-201ENST00000319980 RFFLQ8WZ73 363 aa8.18□□□□□ -1.1
IFT88-201ENST00000319980 L3MBTL3Q96JM7 780 aaPredicted RBP8.18□□□□□ -1.1
IFT88-201ENST00000319980 IGKV6D-21A0A0A0MT36 114 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 CEP104O60308 925 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 BUB1BO60566 1050 aaPredicted RBP8.17□□□□□ -1.1
IFT88-201ENST00000319980 FTLP02792 175 aaPredicted RBP8.17□□□□□ -1.1
IFT88-201ENST00000319980 TMEM253P0C7T8 217 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 MFAP3P55082 362 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 PRPF4BQ13523 1007 aaKnown RBP8.17□□□□□ -1.1
IFT88-201ENST00000319980 KCTD2Q14681 263 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 HSDL1Q3SXM5 330 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 SLC47A2Q86VL8 602 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 RPUSD2Q8IZ73 545 aaKnown RBP8.17□□□□□ -1.1
IFT88-201ENST00000319980 SEPT1Q8WYJ6 367 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 GLG1Q92896 1179 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 ARHGEF26Q96DR7 871 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 PI4K2AQ9BTU6 479 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 UBXN6Q9BZV1 441 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 NRBP2Q9NSY0 501 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 KCNG1Q9UIX4 513 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 COQ4Q9Y3A0 265 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 A0A0U1RQG5 324 aaPredicted RBP8.17□□□□□ -1.1
IFT88-201ENST00000319980 ANKRD62A6NC57 917 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 ARIH2O95376 493 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 TNNI1P19237 187 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 NAMPTP43490 491 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 GPC3P51654 580 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 GABPB1Q06547 395 aaPredicted RBP8.17□□□□□ -1.1
IFT88-201ENST00000319980 GPS2Q13227 327 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 DRP2Q13474 957 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 TERF2Q15554 542 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 METTL7BQ6UX53 244 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 USP50Q70EL3 339 aaPredicted RBP8.17□□□□□ -1.1
IFT88-201ENST00000319980 TRIM50Q86XT4 487 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 FAM71AQ8IYT1 594 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 SYCE1Q8N0S2 351 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 METTL13Q8N6R0 699 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 EPS8L1Q8TE68 723 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 TATDN2Q93075 761 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 VTI1AQ96AJ9 217 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 ZBTB45Q96K62 511 aaPredicted RBP8.17□□□□□ -1.1
IFT88-201ENST00000319980 NT5C1BQ96P26 610 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 FNBP1Q96RU3 617 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 KRT12Q99456 494 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 TARS2Q9BW92 718 aaKnown RBP8.17□□□□□ -1.1
IFT88-201ENST00000319980 NIFKQ9BYG3 293 aaKnown RBP8.17□□□□□ -1.1
IFT88-201ENST00000319980 AZI2Q9H6S1 392 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 STIM2Q9P246 746 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 ANKFY1Q9P2R3 1169 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 CHORDC1Q9UHD1 332 aaPredicted RBP8.17□□□□□ -1.1
IFT88-201ENST00000319980 AGO2Q9UKV8 859 aaKnown RBP8.17□□□□□ -1.1
IFT88-201ENST00000319980 KCNH4Q9UQ05 1017 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 LOXHD1Q8IVV2 1947 aa8.17□□□□□ -1.1
IFT88-201ENST00000319980 GLTPD2A6NH11 291 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 H3BQF6 201 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 SLC25A27O95847 323 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 ARL2P36404 184 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 NLRP11P59045 1033 aaKnown RBP8.16□□□□□ -1.1
IFT88-201ENST00000319980 SLFN11Q7Z7L1 901 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 NOP9Q86U38 636 aaKnown RBP8.16□□□□□ -1.1
IFT88-201ENST00000319980 NT5DC3Q86UY8 548 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 USP38Q8NB14 1042 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 HELQQ8TDG4 1101 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 SHC3Q92529 594 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 DHX38Q92620 1227 aaKnown RBP8.16□□□□□ -1.1
IFT88-201ENST00000319980 CCDC102AQ96A19 550 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 CEP89Q96ST8 783 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 NOP56O00567 594 aaKnown RBP8.16□□□□□ -1.1
IFT88-201ENST00000319980 EXTL3O43909 919 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 ABCD1P33897 745 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 MCCD1P59942 119 aaPredicted RBP8.16□□□□□ -1.1
IFT88-201ENST00000319980 PPIL2Q13356 520 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 FAM160B1Q5W0V3 765 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 FASTKD5Q7L8L6 764 aaKnown RBP8.16□□□□□ -1.1
IFT88-201ENST00000319980 KLHL7Q8IXQ5 586 aa8.16□□□□□ -1.1
IFT88-201ENST00000319980 PSPC1Q8WXF1 523 aaKnown RBP8.16□□□□□ -1.1
IFT88-201ENST00000319980 ZNF516Q92618 1163 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms