RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 C7orf61Q8IZ16 206 aa16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 XXYLT1Q8NBI6 393 aa16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 RNF169Q8NCN4 708 aa16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 TRIM43Q96BQ3 446 aaPredicted RBP16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 CCDC127Q96BQ5 260 aa16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 PRIMPOLQ96LW4 560 aa16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 TOX2Q96NM4 488 aa16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 MAGEC2Q9UBF1 373 aaPredicted RBP16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 FRMD4BQ9Y2L6 1034 aa16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 SERPINC1P01008 464 aa16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 PRKCSHP14314 528 aaPredicted RBP16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 RPL13P26373 211 aaKnown RBP16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 ABCD1P33897 745 aa16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 SPAG1Q07617 926 aa16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 SNRNP35Q16560 246 aaKnown RBP16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 LMBRD2Q68DH5 695 aaPredicted RBP16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 NOTUMQ6P988 496 aa16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 UBE2Q1Q7Z7E8 422 aa16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 GOLGA5Q8TBA6 731 aa16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 VPS16Q9H269 839 aa16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 NXF3Q9H4D5 531 aaKnown RBP16.8■□□□□ 0.28
PDLIM5-202ENST00000318007 A0A1B0GUA9 196 aa16.79■□□□□ 0.28
PDLIM5-202ENST00000318007 MGEA5O60502 916 aa16.79■□□□□ 0.28
PDLIM5-202ENST00000318007 ADRB2P07550 413 aa16.79■□□□□ 0.28
PDLIM5-202ENST00000318007 MTIF2P46199 727 aaKnown RBP16.79■□□□□ 0.28
PDLIM5-202ENST00000318007 WNT7BP56706 349 aa16.79■□□□□ 0.28
PDLIM5-202ENST00000318007 FAM187BQ17R55 369 aa16.79■□□□□ 0.28
PDLIM5-202ENST00000318007 TCP11X2Q5H9J9 407 aa16.79■□□□□ 0.28
PDLIM5-202ENST00000318007 CT47A1Q5JQC4 288 aaPredicted RBP16.79■□□□□ 0.28
PDLIM5-202ENST00000318007 C1orf53Q5VUE5 145 aa16.79■□□□□ 0.28
PDLIM5-202ENST00000318007 FAM186BQ8IYM0 893 aa16.79■□□□□ 0.28
PDLIM5-202ENST00000318007 POP1Q99575 1024 aaKnown RBP16.79■□□□□ 0.28
PDLIM5-202ENST00000318007 ADPGKQ9BRR6 497 aa16.79■□□□□ 0.28
PDLIM5-202ENST00000318007 TBX21Q9UL17 535 aa16.79■□□□□ 0.28
PDLIM5-202ENST00000318007 TNFSF13BQ9Y275 285 aa16.79■□□□□ 0.28
PDLIM5-202ENST00000318007 A0A0B4J269 797 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 PITPNM1O00562 1244 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 ABLIM1O14639 778 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 GPR182O15218 404 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 PIGRP01833 764 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 TRIM49P0CI25 452 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 TRIM49CP0CI26 452 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 DLATP10515 647 aaKnown RBP16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 EPB41P11171 864 aaKnown RBP16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 RAG1P15918 1043 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 AKAP5P24588 427 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 DLG4P78352 724 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 GPNMBQ14956 572 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 CDKAL1Q5VV42 579 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 GPD1LQ8N335 351 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 SEZ6LQ9BYH1 1024 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 TMX1Q9H3N1 280 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 THAP9Q9H5L6 903 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 PTPRHQ9HD43 1115 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 FSD2A1L4K1 749 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 MEIS3P2A8K0S8 358 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 ZNF18P17022 549 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 PROZP22891 400 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 MCL1Q07820 350 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 KRT31Q15323 416 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 FAM26DQ5JW98 314 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 SLFN12LQ6IEE8 588 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 SLC27A1Q6PCB7 646 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 TMEM130Q8N3G9 435 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 DBF4BQ8NFT6 615 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 CXCL16Q9H2A7 254 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 SNTG2Q9NY99 539 aa16.78■□□□□ 0.28
PDLIM5-202ENST00000318007 CDH23Q9H251 3354 aa16.77■□□□□ 0.28
PDLIM5-202ENST00000318007 RPLP2P05387 115 aaKnown RBP16.77■□□□□ 0.28
PDLIM5-202ENST00000318007 CXCL8P10145 99 aa16.77■□□□□ 0.28
PDLIM5-202ENST00000318007 CSF2RAP15509 400 aa16.77■□□□□ 0.28
PDLIM5-202ENST00000318007 ZSCAN20P17040 1043 aaPredicted RBP16.77■□□□□ 0.28
PDLIM5-202ENST00000318007 GARTP22102 1010 aa16.77■□□□□ 0.28
PDLIM5-202ENST00000318007 PSMC2P35998 433 aaKnown RBP16.77■□□□□ 0.28
PDLIM5-202ENST00000318007 TCTN1Q2MV58 587 aa16.77■□□□□ 0.28
PDLIM5-202ENST00000318007 CRELD2Q6UXH1 353 aaPredicted RBP16.77■□□□□ 0.28
PDLIM5-202ENST00000318007 TET1Q8NFU7 2136 aa16.77■□□□□ 0.28
PDLIM5-202ENST00000318007 LPPQ93052 612 aa16.77■□□□□ 0.28
PDLIM5-202ENST00000318007 ADAM2Q99965 735 aa16.77■□□□□ 0.28
PDLIM5-202ENST00000318007 ERVK-5Q9HDB9 667 aa16.77■□□□□ 0.28
PDLIM5-202ENST00000318007 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.77■□□□□ 0.282e-6■■■■■ 86.5
PDLIM5-202ENST00000318007 TOPORSQ9NS56 1045 aaPredicted RBP16.77■□□□□ 0.28
PDLIM5-202ENST00000318007 DMAC2Q9NW81 257 aa16.77■□□□□ 0.28
PDLIM5-202ENST00000318007 RBAKQ9NYW8 714 aaPredicted RBP16.77■□□□□ 0.28
PDLIM5-202ENST00000318007 KLK14Q9P0G3 267 aa16.77■□□□□ 0.28
PDLIM5-202ENST00000318007 IFNKQ9P0W0 207 aa16.77■□□□□ 0.28
PDLIM5-202ENST00000318007 ALPK3Q96L96 1907 aa16.77■□□□□ 0.27
PDLIM5-202ENST00000318007 N4BP3O15049 544 aa16.77■□□□□ 0.27
PDLIM5-202ENST00000318007 CAND2O75155 1236 aa16.77■□□□□ 0.27
PDLIM5-202ENST00000318007 FANCCQ00597 558 aa16.77■□□□□ 0.27
PDLIM5-202ENST00000318007 NAP1L5Q96NT1 182 aaPredicted RBP16.77■□□□□ 0.27
PDLIM5-202ENST00000318007 TUBGCP2Q9BSJ2 902 aa16.77■□□□□ 0.27
PDLIM5-202ENST00000318007 RNF39Q9H2S5 420 aa16.77■□□□□ 0.27
PDLIM5-202ENST00000318007 ARMCX3Q9UH62 379 aaPredicted RBP16.77■□□□□ 0.27
PDLIM5-202ENST00000318007 ZMYND8Q9ULU4 1186 aaPredicted RBP16.77■□□□□ 0.27
PDLIM5-202ENST00000318007 OGTO15294 1046 aa16.76■□□□□ 0.27
PDLIM5-202ENST00000318007 EXTL3O43909 919 aa16.76■□□□□ 0.27
PDLIM5-202ENST00000318007 FAM189A1O60320 539 aa16.76■□□□□ 0.27
PDLIM5-202ENST00000318007 FGFR1OPO95684 399 aaKnown RBP16.76■□□□□ 0.27
PDLIM5-202ENST00000318007 STAG3L1P0CL83 205 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms