RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 GSCP56915 257 aaPredicted RBP8.03□□□□□ -1.12
CDHR3-201ENST00000317716 MIIPQ5JXC2 388 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 TBC1D16Q8TBP0 767 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 CEP95Q96GE4 821 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 FNBP1Q96RU3 617 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 IFT122Q9HBG6 1241 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 C2CD2Q9Y426 696 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 MAD1L1Q9Y6D9 718 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 NRAPQ86VF7 1730 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 KDM3AQ9Y4C1 1321 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 RSPH10B2B2RC85 870 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 ZBED4O75132 1171 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 RSPH10BP0C881 870 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 ATP6V1B1P15313 513 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 SAT1P21673 171 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 COMTP21964 271 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 PIK3CAP42336 1068 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 FNTAP49354 379 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 KCNK18Q7Z418 384 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 RNF168Q8IYW5 571 aaPredicted RBP8.03□□□□□ -1.12
CDHR3-201ENST00000317716 ZBED8Q8IZ13 594 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 AGR3Q8TD06 166 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.03□□□□□ -1.12
CDHR3-201ENST00000317716 SLC26A7Q8TE54 656 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 C7orf25Q9BPX7 421 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 NUP85Q9BW27 656 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 CRYBG1Q9Y4K1 1723 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 PVALEFA0A1B0GWK0 134 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 PODXLO00592 558 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 GAS7O60861 476 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 TOM1L1O75674 476 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 RASSF9O75901 435 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 DCTN3O75935 186 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 MT-ND3P03897 115 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 CREB1P16220 341 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 PRLRP16471 622 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 CD58P19256 250 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 PGM1P36871 562 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 THOC5Q13769 683 aaKnown RBP8.03□□□□□ -1.12
CDHR3-201ENST00000317716 ZNF394Q53GI3 561 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 RCSD1Q6JBY9 416 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 PRPF31Q8WWY3 499 aaKnown RBP8.03□□□□□ -1.12
CDHR3-201ENST00000317716 NMD3Q96D46 503 aaKnown RBP8.03□□□□□ -1.12
CDHR3-201ENST00000317716 TYW1Q9NV66 732 aaKnown RBP8.03□□□□□ -1.12
CDHR3-201ENST00000317716 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.03□□□□□ -1.12
CDHR3-201ENST00000317716 NR2E1Q9Y466 385 aa8.03□□□□□ -1.12
CDHR3-201ENST00000317716 A0A1W2PQJ5 194 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 GH1P01241 217 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 SERPINB3P29508 390 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 GRB10Q13322 594 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 SEC23AQ15436 765 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 IZUMO3Q5VZ72 239 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 TTC8Q8TAM2 541 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 ZNF564Q8TBZ8 553 aaPredicted RBP8.02□□□□□ -1.13
CDHR3-201ENST00000317716 RSAD2Q8WXG1 361 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 ACSF2Q96CM8 615 aaPredicted RBP8.02□□□□□ -1.13
CDHR3-201ENST00000317716 THTPAQ9BU02 230 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 SLC13A1Q9BZW2 595 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 CDC42EP4Q9H3Q1 356 aaKnown RBP8.02□□□□□ -1.13
CDHR3-201ENST00000317716 TRABDQ9H4I3 376 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 TMEM165Q9HC07 324 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 TOGARAM1Q9Y4F4 1720 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 ECE2O60344 883 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 CSF1RP07333 972 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 NCF2P19878 526 aaPredicted RBP8.02□□□□□ -1.13
CDHR3-201ENST00000317716 MX2P20592 715 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 ATP4AP20648 1035 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 CHRNA3P32297 505 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 CDK8P49336 464 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 ARFIP2P53365 341 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 SF3B3Q15393 1217 aaKnown RBP8.02□□□□□ -1.13
CDHR3-201ENST00000317716 RABGAP1LQ5R372 815 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 RNF220Q5VTB9 566 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 LMBRD2Q68DH5 695 aaPredicted RBP8.02□□□□□ -1.13
CDHR3-201ENST00000317716 PRUNE1Q86TP1 453 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 ELOA2Q8IYF1 753 aaPredicted RBP8.02□□□□□ -1.13
CDHR3-201ENST00000317716 MSL3Q8N5Y2 521 aaKnown RBP8.02□□□□□ -1.13
CDHR3-201ENST00000317716 SPATA20Q8TB22 786 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 LZTS2Q9BRK4 669 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 IKZF4Q9H2S9 585 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 SLCO1B3Q9NPD5 702 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 ETAA1Q9NY74 926 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 TXNDC16Q9P2K2 825 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 CHMP2BQ9UQN3 213 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 MYO3BQ8WXR4 1341 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 SYNGAP1Q96PV0 1343 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.02□□□□□ -1.13
CDHR3-201ENST00000317716 USP17L10C9JJH3 530 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 CYP26A1O43174 497 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 KLRC4O43908 158 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 SUPT3HO75486 399 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 INHBAP08476 426 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 SLURP2P0DP57 97 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 MYCLP12524 364 aaPredicted RBP8.02□□□□□ -1.13
CDHR3-201ENST00000317716 NSFP46459 744 aaKnown RBP8.02□□□□□ -1.13
CDHR3-201ENST00000317716 RPL21P46778 160 aaKnown RBP8.02□□□□□ -1.13
CDHR3-201ENST00000317716 ITGA8P53708 1063 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 USP4Q13107 963 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 MAPK7Q13164 816 aa8.02□□□□□ -1.13
CDHR3-201ENST00000317716 RASA3Q14644 834 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms