RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 DSC1Q08554 894 aa19.61■□□□□ 0.73
TPM1-203ENST00000317516 PTPN14Q15678 1187 aa19.61■□□□□ 0.73
TPM1-203ENST00000317516 CDR2LQ86X02 465 aaPredicted RBP19.61■□□□□ 0.73
TPM1-203ENST00000317516 RPS6KC1Q96S38 1066 aa19.61■□□□□ 0.73
TPM1-203ENST00000317516 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.61■□□□□ 0.73
TPM1-203ENST00000317516 MIOSQ9NXC5 875 aa19.61■□□□□ 0.73
TPM1-203ENST00000317516 RAPGEFL1Q9UHV5 662 aa19.61■□□□□ 0.73
TPM1-203ENST00000317516 SMC3Q9UQE7 1217 aa19.61■□□□□ 0.73
TPM1-203ENST00000317516 NR2E1Q9Y466 385 aa19.61■□□□□ 0.73
TPM1-203ENST00000317516 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.61■□□□□ 0.73
TPM1-203ENST00000317516 SSBP05455 408 aaKnown RBP eCLIP19.6■□□□□ 0.73
TPM1-203ENST00000317516 PRKCBP05771 671 aa19.6■□□□□ 0.73
TPM1-203ENST00000317516 URODP06132 367 aa19.6■□□□□ 0.73
TPM1-203ENST00000317516 ECM1Q16610 540 aa19.6■□□□□ 0.73
TPM1-203ENST00000317516 ATAT1Q5SQI0 421 aa19.6■□□□□ 0.73
TPM1-203ENST00000317516 KIAA1841Q6NSI8 718 aa19.6■□□□□ 0.73
TPM1-203ENST00000317516 APBB1IPQ7Z5R6 666 aaPredicted RBP19.6■□□□□ 0.73
TPM1-203ENST00000317516 CABP7Q86V35 215 aa19.6■□□□□ 0.73
TPM1-203ENST00000317516 SLC22A17Q8WUG5 538 aa19.6■□□□□ 0.73
TPM1-203ENST00000317516 EDAQ92838 391 aa19.6■□□□□ 0.73
TPM1-203ENST00000317516 KLHL5Q96PQ7 755 aa19.6■□□□□ 0.73
TPM1-203ENST00000317516 VN1R3Q9BXE9 311 aa19.6■□□□□ 0.73
TPM1-203ENST00000317516 DPP7Q9UHL4 492 aa19.6■□□□□ 0.73
TPM1-203ENST00000317516 SPDYE4A6NLX3 237 aa19.59■□□□□ 0.73
TPM1-203ENST00000317516 LIG1P18858 919 aa19.59■□□□□ 0.73
TPM1-203ENST00000317516 GRIK3Q13003 919 aa19.59■□□□□ 0.73
TPM1-203ENST00000317516 ELMSAN1Q6PJG2 1045 aa19.59■□□□□ 0.73
TPM1-203ENST00000317516 KCTD17Q8N5Z5 321 aa19.59■□□□□ 0.73
TPM1-203ENST00000317516 BSNDQ8WZ55 320 aa19.59■□□□□ 0.73
TPM1-203ENST00000317516 HERC2P3Q9BVR0 1158 aa19.59■□□□□ 0.73
TPM1-203ENST00000317516 KLK14Q9P0G3 267 aa19.59■□□□□ 0.73
TPM1-203ENST00000317516 K7ERI5 159 aa19.58■□□□□ 0.72
TPM1-203ENST00000317516 LILRB3O75022 631 aa19.58■□□□□ 0.72
TPM1-203ENST00000317516 CNPP09543 421 aaKnown RBP19.58■□□□□ 0.72
TPM1-203ENST00000317516 EPCAMP16422 314 aa19.58■□□□□ 0.72
TPM1-203ENST00000317516 RARS2Q5T160 578 aaKnown RBP19.58■□□□□ 0.72
TPM1-203ENST00000317516 GSTCDQ8NEC7 633 aa19.58■□□□□ 0.72
TPM1-203ENST00000317516 FBXL18Q96ME1 805 aa19.58■□□□□ 0.72
TPM1-203ENST00000317516 TBC1D32Q96NH3 1257 aa19.58■□□□□ 0.72
TPM1-203ENST00000317516 PDZD7Q9H5P4 517 aa19.58■□□□□ 0.72
TPM1-203ENST00000317516 MARCH5Q9NX47 278 aa19.58■□□□□ 0.72
TPM1-203ENST00000317516 KCNG1Q9UIX4 513 aa19.58■□□□□ 0.72
TPM1-203ENST00000317516 PHLPP2Q6ZVD8 1323 aa19.57■□□□□ 0.72
TPM1-203ENST00000317516 C2CD2LO14523 706 aa19.57■□□□□ 0.72
TPM1-203ENST00000317516 ADH1AP07327 375 aa19.57■□□□□ 0.72
TPM1-203ENST00000317516 GLUD2P49448 558 aa19.57■□□□□ 0.72
TPM1-203ENST00000317516 DCAF4L1Q3SXM0 396 aa19.57■□□□□ 0.72
TPM1-203ENST00000317516 LARP1BQ659C4 914 aaKnown RBP19.57■□□□□ 0.72
TPM1-203ENST00000317516 FAM122AQ96E09 287 aa19.57■□□□□ 0.72
TPM1-203ENST00000317516 DRC1Q96MC2 740 aa19.57■□□□□ 0.72
TPM1-203ENST00000317516 MFSD14AQ96MC6 490 aa19.57■□□□□ 0.72
TPM1-203ENST00000317516 CCDC113Q9H0I3 377 aa19.57■□□□□ 0.72
TPM1-203ENST00000317516 TSHZ2Q9NRE2 1034 aa19.57■□□□□ 0.72
TPM1-203ENST00000317516 CCDC169A6NNP5 214 aa19.56■□□□□ 0.72
TPM1-203ENST00000317516 E9PMD0 336 aa19.56■□□□□ 0.72
TPM1-203ENST00000317516 TADA2AO75478 443 aa19.56■□□□□ 0.72
TPM1-203ENST00000317516 CD2BP2O95400 341 aaKnown RBP19.56■□□□□ 0.72
TPM1-203ENST00000317516 THP07101 528 aa19.56■□□□□ 0.72
TPM1-203ENST00000317516 CDC25AP30304 524 aa19.56■□□□□ 0.72
TPM1-203ENST00000317516 CLCN4P51793 760 aa19.56■□□□□ 0.72
TPM1-203ENST00000317516 ZXDAP98168 799 aa19.56■□□□□ 0.72
TPM1-203ENST00000317516 ATP2C1P98194 919 aaPredicted RBP19.56■□□□□ 0.72
TPM1-203ENST00000317516 DMP1Q13316 513 aaPredicted RBP19.56■□□□□ 0.72
TPM1-203ENST00000317516 TUSC3Q13454 348 aa19.56■□□□□ 0.72
TPM1-203ENST00000317516 ZRSR1Q15695 479 aaKnown RBP19.56■□□□□ 0.72
TPM1-203ENST00000317516 IL17AQ16552 155 aa19.56■□□□□ 0.72
TPM1-203ENST00000317516 ARL6IP4Q66PJ3 421 aaKnown RBP19.56■□□□□ 0.72
TPM1-203ENST00000317516 TAS1R1Q7RTX1 841 aa19.56■□□□□ 0.72
TPM1-203ENST00000317516 GPR65Q8IYL9 337 aa19.56■□□□□ 0.72
TPM1-203ENST00000317516 C12orf76Q8N812 135 aaPredicted RBP19.56■□□□□ 0.72
TPM1-203ENST00000317516 TIPINQ9BVW5 301 aa19.56■□□□□ 0.72
TPM1-203ENST00000317516 NT5C3AQ9H0P0 336 aa19.56■□□□□ 0.72
TPM1-203ENST00000317516 SFXN1Q9H9B4 322 aa19.56■□□□□ 0.72
TPM1-203ENST00000317516 C17orf75Q9HAS0 396 aa19.56■□□□□ 0.72
TPM1-203ENST00000317516 POLD4Q9HCU8 107 aa19.56■□□□□ 0.72
TPM1-203ENST00000317516 SNTG2Q9NY99 539 aa19.56■□□□□ 0.72
TPM1-203ENST00000317516 ADAM28Q9UKQ2 775 aa19.56■□□□□ 0.72
TPM1-203ENST00000317516 RBM19Q9Y4C8 960 aaKnown RBP19.56■□□□□ 0.72
TPM1-203ENST00000317516 TTLL13PA6NNM8 815 aa19.55■□□□□ 0.72
TPM1-203ENST00000317516 PP2D1A8MPX8 630 aa19.55■□□□□ 0.72
TPM1-203ENST00000317516 PEX3P56589 373 aa19.55■□□□□ 0.72
TPM1-203ENST00000317516 DSG1Q02413 1049 aa19.55■□□□□ 0.72
TPM1-203ENST00000317516 USP41Q3LFD5 358 aa19.55■□□□□ 0.72
TPM1-203ENST00000317516 ATF7IP2Q5U623 682 aa19.55■□□□□ 0.72
TPM1-203ENST00000317516 KIAA0319Q5VV43 1072 aa19.55■□□□□ 0.72
TPM1-203ENST00000317516 TRIM67Q6ZTA4 783 aa19.55■□□□□ 0.72
TPM1-203ENST00000317516 ZBTB33Q86T24 672 aa19.55■□□□□ 0.72
TPM1-203ENST00000317516 RNF168Q8IYW5 571 aaPredicted RBP19.55■□□□□ 0.72
TPM1-203ENST00000317516 CDK5RAP3Q96JB5 506 aa19.55■□□□□ 0.72
TPM1-203ENST00000317516 KIFC3Q9BVG8 833 aa19.55■□□□□ 0.72
TPM1-203ENST00000317516 POMKQ9H5K3 350 aa19.55■□□□□ 0.72
TPM1-203ENST00000317516 TMEM134Q9H6X4 195 aa19.55■□□□□ 0.72
TPM1-203ENST00000317516 RXFP1Q9HBX9 757 aa19.55■□□□□ 0.72
TPM1-203ENST00000317516 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.55■□□□□ 0.72
TPM1-203ENST00000317516 CHST7Q9NS84 486 aa19.55■□□□□ 0.72
TPM1-203ENST00000317516 ARID2Q68CP9 1835 aa19.54■□□□□ 0.72
TPM1-203ENST00000317516 HIP1RO75146 1068 aa19.54■□□□□ 0.72
TPM1-203ENST00000317516 EFEMP2O95967 443 aa19.54■□□□□ 0.72
TPM1-203ENST00000317516 C1RP00736 705 aa19.54■□□□□ 0.72
TPM1-203ENST00000317516 PLA2G5P39877 138 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms