RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 CCDC85CA6NKD9 419 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 PDIA5Q14554 519 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 AMHR2Q16671 573 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 CCDC157Q569K6 752 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 SPATC1LQ9H0A9 340 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 SENP2Q9HC62 589 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 TOM1L1O75674 476 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 NPEPPSP55786 919 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 HERVK_113P62684 666 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 IRX4P78413 519 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 KIFC3Q9BVG8 833 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 STK38LQ9Y2H1 464 aa14.36□□□□□ -0.11
RFFL-201ENST00000315249 MROH2AA6NES4 1674 aa14.35□□□□□ -0.11
RFFL-201ENST00000315249 TTC36A6NLP5 189 aa14.35□□□□□ -0.11
RFFL-201ENST00000315249 LRRC53A6NM62 1247 aa14.35□□□□□ -0.11
RFFL-201ENST00000315249 PLSCR1O15162 318 aa14.35□□□□□ -0.11
RFFL-201ENST00000315249 SV2CQ496J9 727 aa14.35□□□□□ -0.11
RFFL-201ENST00000315249 MAD2L2Q9UI95 211 aa14.35□□□□□ -0.11
RFFL-201ENST00000315249 SYNGAP1Q96PV0 1343 aa14.35□□□□□ -0.11
RFFL-201ENST00000315249 DNAJC6O75061 913 aa14.35□□□□□ -0.11
RFFL-201ENST00000315249 IL1RL1Q01638 556 aa14.35□□□□□ -0.11
RFFL-201ENST00000315249 ANGPTL8Q6UXH0 198 aa14.35□□□□□ -0.11
RFFL-201ENST00000315249 C3orf67Q6ZVT6 689 aa14.35□□□□□ -0.11
RFFL-201ENST00000315249 PBXIP1Q96AQ6 731 aa14.35□□□□□ -0.11
RFFL-201ENST00000315249 TUBE1Q9UJT0 475 aa14.35□□□□□ -0.11
RFFL-201ENST00000315249 TMEM131LA2VDJ0 1609 aa14.35□□□□□ -0.11
RFFL-201ENST00000315249 DNAJB2P25686 324 aa14.35□□□□□ -0.11
RFFL-201ENST00000315249 SLC7A5Q01650 507 aa14.35□□□□□ -0.11
RFFL-201ENST00000315249 ZC2HC1CQ53FD0 456 aaPredicted RBP14.35□□□□□ -0.11
RFFL-201ENST00000315249 FAM49BQ9NUQ9 324 aa14.35□□□□□ -0.11
RFFL-201ENST00000315249 B3GAT3O94766 335 aa14.35□□□□□ -0.11
RFFL-201ENST00000315249 SLCO1A2P46721 670 aa14.35□□□□□ -0.11
RFFL-201ENST00000315249 HABP4Q5JVS0 413 aaKnown RBP14.35□□□□□ -0.11
RFFL-201ENST00000315249 PDIK1LQ8N165 341 aa14.35□□□□□ -0.11
RFFL-201ENST00000315249 ZNF564Q8TBZ8 553 aaPredicted RBP14.35□□□□□ -0.11
RFFL-201ENST00000315249 SH3KBP1Q96B97 665 aa14.35□□□□□ -0.11
RFFL-201ENST00000315249 FAM114A2Q9NRY5 505 aa14.35□□□□□ -0.11
RFFL-201ENST00000315249 PRMT7Q9NVM4 692 aaPredicted RBP14.35□□□□□ -0.11
RFFL-201ENST00000315249 USP32Q8NFA0 1604 aa14.35□□□□□ -0.11
RFFL-201ENST00000315249 WDR91A4D1P6 747 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 IFNAR2P48551 515 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 NAA25Q14CX7 972 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 RBM41Q96IZ5 413 aaKnown RBP14.34□□□□□ -0.11
RFFL-201ENST00000315249 TTC7AQ9ULT0 858 aaPredicted RBP14.34□□□□□ -0.11
RFFL-201ENST00000315249 PITPNM2Q9BZ72 1349 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 CYP26A1O43174 497 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 KPNA2P52292 529 aaKnown RBP14.34□□□□□ -0.11
RFFL-201ENST00000315249 EXOSC10Q01780 885 aaKnown RBP14.34□□□□□ -0.11
RFFL-201ENST00000315249 TTC23LQ6PF05 361 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 TAS2R42Q7RTR8 314 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 PHF20Q9BVI0 1012 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 NDFIP2Q9NV92 336 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 UBA6A0AVT1 1052 aaPredicted RBP14.34□□□□□ -0.11
RFFL-201ENST00000315249 PALMO75781 387 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 MT-ND3P03897 115 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 YWHAHQ04917 246 aaPredicted RBP14.34□□□□□ -0.11
RFFL-201ENST00000315249 TFDP2Q14188 446 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 HEATR6Q6AI08 1181 aaKnown RBP14.34□□□□□ -0.11
RFFL-201ENST00000315249 IL31Q6EBC2 164 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 TRIM67Q6ZTA4 783 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 SHCBP1Q8NEM2 672 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 CDCA5Q96FF9 252 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 COLEC11Q9BWP8 271 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 HMX1Q9NP08 348 aaPredicted RBP14.34□□□□□ -0.11
RFFL-201ENST00000315249 KLHL14Q9P2G3 628 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 PRR23AA6NEV1 266 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 CDC25BP30305 580 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 DEFB115Q30KQ5 88 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 ARHGAP15Q53QZ3 475 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 KCTD16Q68DU8 428 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 CEMIPQ8WUJ3 1361 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 ESRRBO95718 433 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 FGGP02679 453 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 SKIP12755 728 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 SENP6Q9GZR1 1112 aaPredicted RBP14.34□□□□□ -0.11
RFFL-201ENST00000315249 IP6K2Q9UHH9 426 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 KIAA1210Q9ULL0 1709 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 LGALS16A8MUM7 142 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 STX1BP61266 288 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 SNRNP35Q16560 246 aaKnown RBP14.34□□□□□ -0.11
RFFL-201ENST00000315249 VSTM4Q8IW00 320 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 VPS39Q96JC1 886 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 EDEM3Q9BZQ6 932 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 SPATA31D1Q6ZQQ2 1576 aa14.34□□□□□ -0.11
RFFL-201ENST00000315249 DR1Q01658 176 aa14.33□□□□□ -0.11
RFFL-201ENST00000315249 ENOSF1Q7L5Y1 443 aa14.33□□□□□ -0.11
RFFL-201ENST00000315249 HASPINQ8TF76 798 aa14.33□□□□□ -0.11
RFFL-201ENST00000315249 UNC45AQ9H3U1 944 aa14.33□□□□□ -0.11
RFFL-201ENST00000315249 H3BRJ5 948 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 SUPT20HL2P0C7V6 817 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 CDH6P55285 790 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 TPI1P60174 286 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 CENPUQ71F23 418 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 OR6P1Q8NGX9 317 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 RTFDC1Q9BY42 306 aaPredicted RBP14.33□□□□□ -0.12
RFFL-201ENST00000315249 RFX5P48382 616 aaPredicted RBP14.33□□□□□ -0.12
RFFL-201ENST00000315249 PAPOLAP51003 745 aaKnown RBP14.33□□□□□ -0.12
RFFL-201ENST00000315249 CLCN3P51790 818 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 SENP7Q9BQF6 1050 aa14.33□□□□□ -0.12
RFFL-201ENST00000315249 TARS2Q9BW92 718 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms