RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 WNT8AQ9H1J5 351 aa14.43□□□□□ -0.1
SKA3-202ENST00000314759 TAOK3Q9H2K8 898 aa14.43□□□□□ -0.1
SKA3-202ENST00000314759 ECT2Q9H8V3 914 aa14.43□□□□□ -0.1
SKA3-202ENST00000314759 FGFR1OP2Q9NVK5 253 aa14.43□□□□□ -0.1
SKA3-202ENST00000314759 USP15Q9Y4E8 981 aaPredicted RBP14.43□□□□□ -0.1
SKA3-202ENST00000314759 TCP11X1B4DZS4 312 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 KRT16P08779 473 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 PPP3CAQ08209 521 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 GALNTL6Q49A17 601 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 SYDE2Q5VT97 1194 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 ERICH1Q86X53 443 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 RUNDC3BQ96NL0 473 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 ROPN1BQ9BZX4 212 aaPredicted RBP14.42□□□□□ -0.1
SKA3-202ENST00000314759 CDC42EP4Q9H3Q1 356 aaKnown RBP14.42□□□□□ -0.1
SKA3-202ENST00000314759 ROPN1Q9HAT0 212 aaPredicted RBP14.42□□□□□ -0.1
SKA3-202ENST00000314759 AAASQ9NRG9 546 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 HOMER3Q9NSC5 361 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 MTUS1Q9ULD2 1270 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 TRIM33Q9UPN9 1127 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 PASKQ96RG2 1323 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 TMEM120BA0PK00 339 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 DDTLA6NHG4 134 aaPredicted RBP14.42□□□□□ -0.1
SKA3-202ENST00000314759 UPP2O95045 317 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 NDUFB10O96000 172 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 SERPINB2P05120 415 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 ALADP13716 330 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 CHRNB2P17787 502 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 ICA1Q05084 483 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 LLGL1Q15334 1064 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 STXBP4Q6ZWJ1 553 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 SLC9A9Q8IVB4 645 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 SYCP3Q8IZU3 236 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 DYDC1Q8WWB3 177 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 ARHGEF2Q92974 986 aaKnown RBP14.42□□□□□ -0.1
SKA3-202ENST00000314759 KAT5Q92993 513 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 PNMA3Q9UL41 463 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.42□□□□□ -0.1
SKA3-202ENST00000314759 STK38LQ9Y2H1 464 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 FOXO6A8MYZ6 492 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 TISP43B9A030 160 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 HGSO14964 777 aaPredicted RBP14.42□□□□□ -0.1
SKA3-202ENST00000314759 SGPL1O95470 568 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 ACSL3O95573 720 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 VSTM1Q6UX27 236 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 TRMT10CQ7L0Y3 403 aaKnown RBP14.42□□□□□ -0.1
SKA3-202ENST00000314759 STRA6Q9BX79 667 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 PCIF1Q9H4Z3 704 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 ACP6Q9NPH0 428 aa14.42□□□□□ -0.1
SKA3-202ENST00000314759 NOP53Q9NZM5 478 aaKnown RBP14.42□□□□□ -0.1
SKA3-202ENST00000314759 SMCHD1A6NHR9 2005 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 BTAF1O14981 1849 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 MTA2O94776 668 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 HOXA10P31260 410 aaPredicted RBP14.41□□□□□ -0.1
SKA3-202ENST00000314759 INHBEP58166 350 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 IRX1P78414 480 aaPredicted RBP14.41□□□□□ -0.1
SKA3-202ENST00000314759 PPP2R5CQ13362 524 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 CDCA2Q69YH5 1023 aaPredicted RBP14.41□□□□□ -0.1
SKA3-202ENST00000314759 HHIPL2Q6UWX4 724 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 MIGA2Q7L4E1 593 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 MAEAQ7L5Y9 396 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 TEKT1Q969V4 418 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 ARHGEF10LQ9HCE6 1279 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 MLXIPLQ9NP71 852 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 BATF3Q9NR55 127 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 SLC5A4Q9NY91 659 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 KCNG1Q9UIX4 513 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 ADAMTSL1Q8N6G6 1762 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 SPATA31A6Q5VVP1 1343 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 SPOPO43791 374 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 ECEL1O95672 775 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 GCLMP48507 274 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 CALCOCO2Q13137 446 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 ZKSCAN8Q15776 578 aaPredicted RBP14.41□□□□□ -0.1
SKA3-202ENST00000314759 DOK7Q18PE1 504 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 NOP9Q86U38 636 aaKnown RBP14.41□□□□□ -0.1
SKA3-202ENST00000314759 ARMC2Q8NEN0 867 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 MICAL1Q8TDZ2 1067 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.41□□□□□ -0.1
SKA3-202ENST00000314759 CTNNAL1Q9UBT7 734 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 NOCTQ9UK39 431 aaKnown RBP14.41□□□□□ -0.1
SKA3-202ENST00000314759 PCDHAC2Q9Y5I4 1007 aa14.41□□□□□ -0.1
SKA3-202ENST00000314759 RRP1BQ14684 758 aaKnown RBP14.4□□□□□ -0.1
SKA3-202ENST00000314759 C11orf91Q3C1V1 193 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 NUGGCQ68CJ6 796 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 RNF207Q6ZRF8 634 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 DAW1Q8N136 415 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 C12orf50Q8NA57 414 aaPredicted RBP14.4□□□□□ -0.1
SKA3-202ENST00000314759 CCHCR1Q8TD31 782 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 EPS8L1Q8TE68 723 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 MORC4Q8TE76 937 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 GMCL1Q96IK5 515 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 NACC1Q96RE7 527 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 CRAMP1Q96RY5 1269 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 NUP85Q9BW27 656 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 LRRC19Q9H756 370 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 ENO4A6NNW6 628 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 PIK3CDO00329 1044 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 SMNDC1O75940 238 aaKnown RBP eCLIP14.4□□□□□ -0.1
SKA3-202ENST00000314759 GDF11O95390 407 aa14.4□□□□□ -0.1
SKA3-202ENST00000314759 CHKAP35790 457 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms