RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 PRRT2Q7Z6L0 340 aaPredicted RBP13.42□□□□□ -0.26
RNF4-201ENST00000314289 ERO1BQ86YB8 467 aa13.42□□□□□ -0.26
RNF4-201ENST00000314289 RPUSD2Q8IZ73 545 aaKnown RBP13.42□□□□□ -0.26
RNF4-201ENST00000314289 AP1M1Q9BXS5 423 aa13.42□□□□□ -0.26
RNF4-201ENST00000314289 PAPPA2Q9BXP8 1791 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 CEP104O60308 925 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 GJB1P08034 283 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 EPHX2P34913 555 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 NLRP11P59045 1033 aaKnown RBP13.41□□□□□ -0.26
RNF4-201ENST00000314289 TRADDQ15628 312 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 TTC31Q49AM3 519 aaPredicted RBP13.41□□□□□ -0.26
RNF4-201ENST00000314289 SV2AQ7L0J3 742 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 ADAT2Q7Z6V5 191 aaKnown RBP13.41□□□□□ -0.26
RNF4-201ENST00000314289 C12orf56Q8IXR9 622 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 LRRC71Q8N4P6 559 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 TRAPPC12Q8WVT3 735 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 GLG1Q92896 1179 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 NTPCRQ9BSD7 190 aaKnown RBP13.41□□□□□ -0.26
RNF4-201ENST00000314289 TIPINQ9BVW5 301 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 TARS2Q9BW92 718 aaKnown RBP13.41□□□□□ -0.26
RNF4-201ENST00000314289 HAPLN2Q9GZV7 340 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 MAFBQ9Y5Q3 323 aaPredicted RBP13.41□□□□□ -0.26
RNF4-201ENST00000314289 MYPNQ86TC9 1320 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 TMEM110-MUSTN1A8MSY1 372 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 STAT5BP51692 787 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 PPATQ06203 517 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 MYBPC2Q14324 1141 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 CFAP221Q4G0U5 840 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 SPOPLQ6IQ16 392 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 PEX26Q7Z412 305 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 PHLDB2Q86SQ0 1253 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 LRRC57Q8N9N7 239 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 SLC7A3Q8WY07 619 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 KRT12Q99456 494 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 AGPAT1Q99943 283 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 PDGFCQ9NRA1 345 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 NENFQ9UMX5 172 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 BUB1BO60566 1050 aaPredicted RBP13.41□□□□□ -0.26
RNF4-201ENST00000314289 SRGAP2CP0DJJ0 459 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 PRLRP16471 622 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 NAA35Q5VZE5 725 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 KRT39Q6A163 491 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 WDR93Q6P2C0 686 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 NOP9Q86U38 636 aaKnown RBP13.41□□□□□ -0.26
RNF4-201ENST00000314289 PACS2Q86VP3 889 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 CDR2LQ86X02 465 aaPredicted RBP13.41□□□□□ -0.26
RNF4-201ENST00000314289 DEPTORQ8TB45 409 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 AFAP1L1Q8TED9 768 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 TAF4BQ92750 862 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 PORCNQ9H237 461 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 EFCC1Q9HA90 598 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 COG5Q9UP83 839 aa13.41□□□□□ -0.26
RNF4-201ENST00000314289 KIF4AO95239 1232 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 FTLP02792 175 aaPredicted RBP13.4□□□□□ -0.26
RNF4-201ENST00000314289 TNNI1P19237 187 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 NF2P35240 595 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 CYP24A1Q07973 514 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 C2CD6Q53TS8 623 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 DPY19L2Q6NUT2 758 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 C8orf74Q6P047 294 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 GPD1LQ8N335 351 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 SPIRE2Q8WWL2 714 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 CTNNBL1Q8WYA6 563 aaPredicted RBP13.4□□□□□ -0.26
RNF4-201ENST00000314289 ZNF516Q92618 1163 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 PPP1R16BQ96T49 567 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 PCDHB18PQ96TA0 734 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 SYT11Q9BT88 431 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 RABEP2Q9H5N1 569 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 ARHGAP28Q9P2N2 729 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 FBXO40Q9UH90 709 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 PTPRJQ12913 1337 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 K7ERI5 159 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 DKC1O60832 514 aaKnown RBP eCLIP13.4□□□□□ -0.26
RNF4-201ENST00000314289 STAM2O75886 525 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 MMEP08473 750 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 GJA5P36382 358 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 LLGL1Q15334 1064 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 ZBTB33Q86T24 672 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 METTL13Q8N6R0 699 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 RPGRIP1Q96KN7 1286 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 CLEC11AQ9Y240 323 aa13.4□□□□□ -0.26
RNF4-201ENST00000314289 SPDYE5A6NIY4 337 aa13.39□□□□□ -0.27
RNF4-201ENST00000314289 GLI1P08151 1106 aa13.39□□□□□ -0.27
RNF4-201ENST00000314289 KRT5P13647 590 aa13.39□□□□□ -0.27
RNF4-201ENST00000314289 MAGEA9P43362 315 aa13.39□□□□□ -0.27
RNF4-201ENST00000314289 STRN3Q13033 797 aa13.39□□□□□ -0.27
RNF4-201ENST00000314289 PRPF4BQ13523 1007 aaKnown RBP13.39□□□□□ -0.27
RNF4-201ENST00000314289 C10orf76Q5T2E6 689 aa13.39□□□□□ -0.27
RNF4-201ENST00000314289 CPNE8Q86YQ8 564 aa13.39□□□□□ -0.27
RNF4-201ENST00000314289 BTBD6Q96KE9 485 aa13.39□□□□□ -0.27
RNF4-201ENST00000314289 FGD4Q96M96 766 aa13.39□□□□□ -0.27
RNF4-201ENST00000314289 MED4Q9NPJ6 270 aa13.39□□□□□ -0.27
RNF4-201ENST00000314289 RAB20Q9NX57 234 aa13.39□□□□□ -0.27
RNF4-201ENST00000314289 ARID2Q68CP9 1835 aa13.39□□□□□ -0.27
RNF4-201ENST00000314289 ICAM3P32942 547 aa13.39□□□□□ -0.27
RNF4-201ENST00000314289 BIRC3Q13489 604 aa13.39□□□□□ -0.27
RNF4-201ENST00000314289 KIF22Q14807 665 aa13.39□□□□□ -0.27
RNF4-201ENST00000314289 MAP1SQ66K74 1059 aaPredicted RBP13.39□□□□□ -0.27
RNF4-201ENST00000314289 CCNI2Q6ZMN8 369 aaPredicted RBP13.39□□□□□ -0.27
RNF4-201ENST00000314289 FBXL13Q8NEE6 735 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms