RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 SMAD4Q13485 552 aaKnown RBP16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 PTPN14Q15678 1187 aa16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 PUS10Q3MIT2 529 aaKnown RBP16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 SYCE2Q6PIF2 218 aa16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 VPS52Q8N1B4 723 aa16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 FEZF2Q8TBJ5 459 aa16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 MICAL1Q8TDZ2 1067 aa16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 PPP2R3CQ969Q6 453 aa16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 TMEM169Q96HH4 297 aa16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 USP28Q96RU2 1077 aa16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 APOL6Q9BWW8 343 aa16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 NT5C3AQ9H0P0 336 aa16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 S1PR5Q9H228 398 aa16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 ENTPD7Q9NQZ7 604 aa16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 KANSL3Q9P2N6 904 aa16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 PUF60Q9UHX1 559 aaKnown RBP16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 CD207Q9UJ71 328 aa16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 PHLPP2Q6ZVD8 1323 aa16.1■□□□□ 0.17
PPP1CA-201ENST00000312989 NCOR1O75376 2440 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 NPHP3-ACAD11A0A0J9YXS1 232 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 SFI1A8K8P3 1242 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 N4BP3O15049 544 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 CLASP2O75122 1294 aaKnown RBP16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 NDUFV1P49821 464 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 EFNA5P52803 228 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 RNASELQ05823 741 aaKnown RBP16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 NCBP1Q09161 790 aaKnown RBP16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 SMC1AQ14683 1233 aaKnown RBP16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 KARSQ15046 597 aaKnown RBP16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 ZRSR1Q15695 479 aaKnown RBP16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 EP400NLQ6ZTU2 488 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 TAS1R1Q7RTX1 841 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 TMC7Q7Z402 723 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 CEP120Q8N960 986 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 TMEM161BQ8NDZ6 487 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 SPIRE2Q8WWL2 714 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 SUSD6Q92537 303 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 IFT74Q96LB3 600 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 FIZ1Q96SL8 496 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 PAAF1Q9BRP4 392 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 TIPINQ9BVW5 301 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 CCSER1Q9C0I3 900 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 TMEM134Q9H6X4 195 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 C17orf75Q9HAS0 396 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 SNTG2Q9NY99 539 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 KLK14Q9P0G3 267 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 CACNG4Q9UBN1 327 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 TNFSF13BQ9Y275 285 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 HCFC2Q9Y5Z7 792 aa16.09■□□□□ 0.17
PPP1CA-201ENST00000312989 STX6O43752 255 aa16.08■□□□□ 0.16
PPP1CA-201ENST00000312989 RECQL4O94761 1208 aa16.08■□□□□ 0.16
PPP1CA-201ENST00000312989 PLCG1P19174 1290 aa16.08■□□□□ 0.16
PPP1CA-201ENST00000312989 ZNF131P52739 623 aa16.08■□□□□ 0.16
PPP1CA-201ENST00000312989 CACNB1Q02641 598 aaPredicted RBP16.08■□□□□ 0.16
PPP1CA-201ENST00000312989 RAD51AP2Q09MP3 1159 aa16.08■□□□□ 0.16
PPP1CA-201ENST00000312989 ATF7IP2Q5U623 682 aa16.08■□□□□ 0.16
PPP1CA-201ENST00000312989 EPSTI1Q96J88 318 aa16.08■□□□□ 0.16
PPP1CA-201ENST00000312989 DRC1Q96MC2 740 aa16.08■□□□□ 0.16
PPP1CA-201ENST00000312989 ACO2Q99798 780 aaKnown RBP16.08■□□□□ 0.16
PPP1CA-201ENST00000312989 TRIM6Q9C030 488 aaPredicted RBP16.08■□□□□ 0.16
PPP1CA-201ENST00000312989 CDT1Q9H211 546 aa16.08■□□□□ 0.16
PPP1CA-201ENST00000312989 KCND2Q9NZV8 630 aa16.08■□□□□ 0.16
PPP1CA-201ENST00000312989 PRG3Q9Y2Y8 225 aaPredicted RBP16.08■□□□□ 0.16
PPP1CA-201ENST00000312989 CARNS1A5YM72 827 aa16.07■□□□□ 0.16
PPP1CA-201ENST00000312989 BRD1O95696 1058 aa16.07■□□□□ 0.16
PPP1CA-201ENST00000312989 PLS3P13797 630 aa16.07■□□□□ 0.16
PPP1CA-201ENST00000312989 IGFBP6P24592 240 aaPredicted RBP16.07■□□□□ 0.16
PPP1CA-201ENST00000312989 MARCKSP29966 332 aaPredicted RBP16.07■□□□□ 0.16
PPP1CA-201ENST00000312989 GRIK3Q13003 919 aa16.07■□□□□ 0.16
PPP1CA-201ENST00000312989 DMP1Q13316 513 aaPredicted RBP16.07■□□□□ 0.16
PPP1CA-201ENST00000312989 SPECC1Q5M775 1068 aa16.07■□□□□ 0.16
PPP1CA-201ENST00000312989 ANKRD54Q6NXT1 300 aa16.07■□□□□ 0.16
PPP1CA-201ENST00000312989 GJD3Q8N144 294 aa16.07■□□□□ 0.16
PPP1CA-201ENST00000312989 SLC22A17Q8WUG5 538 aa16.07■□□□□ 0.16
PPP1CA-201ENST00000312989 CLIC6Q96NY7 704 aa16.07■□□□□ 0.16
PPP1CA-201ENST00000312989 REEP2Q9BRK0 252 aa16.07■□□□□ 0.16
PPP1CA-201ENST00000312989 HERC2P3Q9BVR0 1158 aa16.07■□□□□ 0.16
PPP1CA-201ENST00000312989 CDH22Q9UJ99 828 aa16.07■□□□□ 0.16
PPP1CA-201ENST00000312989 USP15Q9Y4E8 981 aaPredicted RBP16.07■□□□□ 0.16
PPP1CA-201ENST00000312989 SRPRBQ9Y5M8 271 aaKnown RBP16.07■□□□□ 0.16
PPP1CA-201ENST00000312989 A0A087X0B3 334 aa16.06■□□□□ 0.16
PPP1CA-201ENST00000312989 CCDC169A6NNP5 214 aa16.06■□□□□ 0.16
PPP1CA-201ENST00000312989 K7ERI5 159 aa16.06■□□□□ 0.16
PPP1CA-201ENST00000312989 SLC16A4O15374 487 aa16.06■□□□□ 0.16
PPP1CA-201ENST00000312989 CXCL14O95715 111 aa16.06■□□□□ 0.16
PPP1CA-201ENST00000312989 SOD2P04179 222 aa16.06■□□□□ 0.16
PPP1CA-201ENST00000312989 ALDH2P05091 517 aa16.06■□□□□ 0.16
PPP1CA-201ENST00000312989 MAPTP10636 758 aaKnown RBP16.06■□□□□ 0.16
PPP1CA-201ENST00000312989 LIG1P18858 919 aa16.06■□□□□ 0.16
PPP1CA-201ENST00000312989 NASPP49321 788 aaPredicted RBP16.06■□□□□ 0.16
PPP1CA-201ENST00000312989 NCKAP1LP55160 1127 aa16.06■□□□□ 0.16
PPP1CA-201ENST00000312989 MCM6Q14566 821 aa16.06■□□□□ 0.16
PPP1CA-201ENST00000312989 XKR4Q5GH76 650 aa16.06■□□□□ 0.16
PPP1CA-201ENST00000312989 ADHFE1Q8IWW8 467 aa16.06■□□□□ 0.16
PPP1CA-201ENST00000312989 RAD54LQ92698 747 aa16.06■□□□□ 0.16
PPP1CA-201ENST00000312989 TARS2Q9BW92 718 aaKnown RBP16.06■□□□□ 0.16
PPP1CA-201ENST00000312989 HAPLN2Q9GZV7 340 aa16.06■□□□□ 0.16
PPP1CA-201ENST00000312989 C11orf16Q9NQ32 467 aa16.06■□□□□ 0.16
PPP1CA-201ENST00000312989 KMT5AQ9NQR1 393 aa16.06■□□□□ 0.16
PPP1CA-201ENST00000312989 CHST7Q9NS84 486 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms