RNA–Protein interactions for RNA: ENST00000311659.4

UBQLN3-201, Transcript of ubiquilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN3, Length 2,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3-201ENST00000311659 DMAC2Q9NW81 257 aa9.12□□□□□ -0.95
UBQLN3-201ENST00000311659 ADAM22Q9P0K1 906 aa9.12□□□□□ -0.95
UBQLN3-201ENST00000311659 PPP1R1BQ9UD71 204 aaPredicted RBP9.12□□□□□ -0.95
UBQLN3-201ENST00000311659 PNMA3Q9UL41 463 aa9.12□□□□□ -0.95
UBQLN3-201ENST00000311659 ARL2BPQ9Y2Y0 163 aa9.12□□□□□ -0.95
UBQLN3-201ENST00000311659 FAM170AA1A519 330 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 FAM86B1E9PN63 330 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 TBCAO75347 108 aaKnown RBP9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 EYA4O95677 639 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 FAM86B2P0C5J1 330 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 PYGMP11217 842 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 GAP43P17677 238 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 RFX1P22670 979 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 SKIV2L2P42285 1042 aaKnown RBP9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 CCNHP51946 323 aaPredicted RBP9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 TGFB2P61812 414 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 MGAT5Q09328 741 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 MPP2Q14168 576 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 COG2Q14746 738 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 PRR16Q569H4 304 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 NUGGCQ68CJ6 796 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 CC2D2BQ6DHV5 1058 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 RINT1Q6NUQ1 792 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 SPATA21Q7Z572 469 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 EGFL6Q8IUX8 553 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 KIF2BQ8N4N8 673 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 SLCO2A1Q92959 643 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 RMDN2Q96LZ7 410 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 CCDC113Q9H0I3 377 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 SLC24A3Q9HC58 644 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 PASKQ96RG2 1323 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 FOXN3O00409 490 aaPredicted RBP9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 LIN7AO14910 233 aaPredicted RBP9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 WFS1O76024 890 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 TRIM49P0CI25 452 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 TRIM49CP0CI26 452 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 COMTP21964 271 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 NMT1P30419 496 aaKnown RBP9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 SHMT1P34896 483 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 IRX1P78414 480 aaPredicted RBP9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 ZKSCAN8Q15776 578 aaPredicted RBP9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 ZC2HC1CQ53FD0 456 aaPredicted RBP9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 SLC13A5Q86YT5 568 aaPredicted RBP9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 PLCD4Q9BRC7 762 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 POLR3CQ9BUI4 534 aaPredicted RBP9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 COA1Q9GZY4 146 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 RABGAP1Q9Y3P9 1069 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 DAGLAQ9Y4D2 1042 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 STK24Q9Y6E0 443 aa9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 BRCA1P38398 1863 aaKnown RBP9.11□□□□□ -0.95
UBQLN3-201ENST00000311659 UBE4BO95155 1302 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 GH1P01241 217 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 FTLP02792 175 aaPredicted RBP9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 PTGER2P43116 358 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 MYL7Q01449 175 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 CYP4A11Q02928 519 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 CCDC15Q0P6D6 951 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 ACVR2BQ13705 512 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 ARHGAP44Q17R89 818 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 C11orf91Q3C1V1 193 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 ANKRD20A2Q5SQ80 823 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 MFSD14BQ5SR56 506 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 SEL1L2Q5TEA6 688 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 ANKRD20A1Q5TYW2 823 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 LRCH2Q5VUJ6 765 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 ANKRD20A3Q5VUR7 823 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 RNF43Q68DV7 783 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 NAIF1Q69YI7 327 aaPredicted RBP9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 MIS18BP1Q6P0N0 1132 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 MIGA2Q7L4E1 593 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 OTUD6AQ7L8S5 288 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 MGARPQ8TDB4 240 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 MORC4Q8TE76 937 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 DYDC1Q8WWB3 177 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 UTP4Q969X6 686 aaKnown RBP9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 IFT74Q96LB3 600 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 FAM20AQ96MK3 541 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 WNT8AQ9H1J5 351 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 TAOK3Q9H2K8 898 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 LRRC19Q9H756 370 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 DNAJC18Q9H819 358 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 DDX4Q9NQI0 724 aaKnown RBP9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 SEPT11Q9NVA2 429 aaKnown RBP9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 WHRNQ9P202 907 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 CTTNBP2NLQ9P2B4 639 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 CTNNAL1Q9UBT7 734 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 TRIM33Q9UPN9 1127 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 PCDHA1Q9Y5I3 950 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 SFI1A8K8P3 1242 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 G3V3G9 751 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 EML1O00423 815 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 KIF3CO14782 793 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 MSH4O15457 936 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 LRRN2O75325 713 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 TCEA3O75764 348 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 IVDP26440 423 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 CIITAP33076 1130 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 SREBF1P36956 1147 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 ABL2P42684 1182 aa9.1□□□□□ -0.95
UBQLN3-201ENST00000311659 KCNJ1P48048 391 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms