RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 ZRSR1Q15695 479 aaKnown RBP9.04□□□□□ -0.96
CHD6-201ENST00000309279 ZNF618Q5T7W0 954 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 IER5Q5VY09 327 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 RRAGBQ5VZM2 374 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 RINT1Q6NUQ1 792 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 PADI6Q6TGC4 694 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 C1orf186Q6ZWK4 172 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 BRSK2Q8IWQ3 736 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 MCPH1Q8NEM0 835 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 VMP1Q96GC9 406 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 MPP4Q96JB8 637 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 PLIN2Q99541 437 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 MTRQ99707 1265 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 WNT8AQ9H1J5 351 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 SUGCTQ9HAC7 445 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 ATP6V0A4Q9HBG4 840 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 NGRNQ9NPE2 291 aaKnown RBP9.04□□□□□ -0.96
CHD6-201ENST00000309279 PRDM5Q9NQX1 630 aaPredicted RBP9.04□□□□□ -0.96
CHD6-201ENST00000309279 KCND2Q9NZV8 630 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 HPSEQ9Y251 543 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 CEP83Q9Y592 693 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 UMODL1Q5DID0 1318 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 SCN5AQ14524 2016 aa9.04□□□□□ -0.96
CHD6-201ENST00000309279 LAMA3Q16787 3333 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 MYH11P35749 1972 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 RSPH10B2B2RC85 870 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 GPR32O75388 356 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 PLA2G4BP0C869 781 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 RSPH10BP0C881 870 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 SYN1P17600 705 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 CYP2C18P33260 490 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 ABCD1P33897 745 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 ARL2P36404 184 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 MRPS6P82932 125 aaKnown RBP9.03□□□□□ -0.96
CHD6-201ENST00000309279 MGAT3Q09327 533 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 GPNMBQ14956 572 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 LRRC8DQ7L1W4 858 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 C14orf80Q86SX3 495 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 SAMD14Q8IZD0 417 aaPredicted RBP9.03□□□□□ -0.96
CHD6-201ENST00000309279 LRRC71Q8N4P6 559 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 IQUBQ8NA54 791 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 PPHLN1Q8NEY8 458 aaKnown RBP9.03□□□□□ -0.96
CHD6-201ENST00000309279 PRR7Q8TB68 274 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 TCP11Q8WWU5 503 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 LARP4BQ92615 738 aaKnown RBP9.03□□□□□ -0.96
CHD6-201ENST00000309279 RAD54LQ92698 747 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 TAF4BQ92750 862 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 PGBD4Q96DM1 585 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 FAM212AQ96EL1 285 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 CCDC43Q96MW1 224 aaKnown RBP9.03□□□□□ -0.96
CHD6-201ENST00000309279 MAP7D2Q96T17 732 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 DUSP9Q99956 384 aaKnown RBP9.03□□□□□ -0.96
CHD6-201ENST00000309279 PYM1Q9BRP8 204 aaKnown RBP9.03□□□□□ -0.96
CHD6-201ENST00000309279 PANK2Q9BZ23 570 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 FAM49AQ9H0Q0 323 aaPredicted RBP9.03□□□□□ -0.96
CHD6-201ENST00000309279 PDCL3Q9H2J4 239 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 ADAMTS10Q9H324 1103 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 CUEDC2Q9H467 287 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 DCAF16Q9NXF7 216 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 UTP6Q9NYH9 597 aaKnown RBP9.03□□□□□ -0.96
CHD6-201ENST00000309279 SUCLA2Q9P2R7 463 aaPredicted RBP9.03□□□□□ -0.96
CHD6-201ENST00000309279 KCNH3Q9ULD8 1083 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 ZMYND8Q9ULU4 1186 aaPredicted RBP9.03□□□□□ -0.96
CHD6-201ENST00000309279 INPP5FQ9Y2H2 1132 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 SQORQ9Y6N5 450 aa9.03□□□□□ -0.96
CHD6-201ENST00000309279 GTPBP10A4D1E9 387 aaKnown RBP9.02□□□□□ -0.96
CHD6-201ENST00000309279 DPYSL4O14531 572 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 POLR2DO15514 142 aaKnown RBP9.02□□□□□ -0.96
CHD6-201ENST00000309279 ASAP2O43150 1006 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 USO1O60763 962 aaKnown RBP9.02□□□□□ -0.96
CHD6-201ENST00000309279 CXCL10P02778 98 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 CCDC175P0C221 793 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 GUCY2CP25092 1073 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 OAS2P29728 719 aaKnown RBP9.02□□□□□ -0.96
CHD6-201ENST00000309279 RFC2P35250 354 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 STAT6P42226 847 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 MORC3Q14149 939 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 MXD4Q14582 209 aaPredicted RBP9.02□□□□□ -0.96
CHD6-201ENST00000309279 MBTPS1Q14703 1052 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 ARSHQ5FYA8 562 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 MICALL1Q8N3F8 863 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 TMEM199Q8N511 208 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 RASSF8Q8NHQ8 419 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 ZFPM2Q8WW38 1151 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 PRPF31Q8WWY3 499 aaKnown RBP9.02□□□□□ -0.96
CHD6-201ENST00000309279 PSPC1Q8WXF1 523 aaKnown RBP9.02□□□□□ -0.96
CHD6-201ENST00000309279 BADQ92934 168 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 TMEM143Q96AN5 459 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 SKA1Q96BD8 255 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 VWCEQ96DN2 955 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 AGAP3Q96P47 875 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 RUSC1Q9BVN2 902 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 TIPINQ9BVW5 301 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 CELF4Q9BZC1 486 aaKnown RBP9.02□□□□□ -0.96
CHD6-201ENST00000309279 KBTBD4Q9NVX7 518 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 COMMD8Q9NX08 183 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 IKBKGQ9Y6K9 419 aa9.02□□□□□ -0.96
CHD6-201ENST00000309279 A0A1B0GVL5 298 aa9.02□□□□□ -0.97
CHD6-201ENST00000309279 TMEM110-MUSTN1A8MSY1 372 aa9.02□□□□□ -0.97
CHD6-201ENST00000309279 H0YGN5 161 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms