RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 SFR1Q86XK3 245 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 APLFQ8IW19 511 aaPredicted RBP11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 CCDC65Q8IXS2 484 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 RASGEF1CQ8N431 466 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 LRRC57Q8N9N7 239 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 NSUN6Q8TEA1 469 aaKnown RBP11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 SEC14L1Q92503 715 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 PACSIN1Q9BY11 444 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 PPANQ9NQ55 473 aaKnown RBP11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 ADAMTS1Q9UHI8 967 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 PACSIN2Q9UNF0 486 aaPredicted RBP11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 PGRMC1O00264 195 aaKnown RBP11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 SLC26A4O43511 780 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 AHCYL1O43865 530 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 EYA4O95677 639 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 CCNE2O96020 404 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 HPDP32754 393 aaPredicted RBP11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 CTNNA1P35221 906 aaKnown RBP11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 KCNA1Q09470 495 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 EPHA7Q15375 998 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 UGCGQ16739 394 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 B3GNT9Q6UX72 402 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 KSR1Q8IVT5 923 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 CCDC114Q96M63 670 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 RIT2Q99578 217 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 SPATC1LQ9H0A9 340 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 SLITRK6Q9H5Y7 841 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 PCDHA2Q9Y5H9 948 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 PTPRFP10586 1907 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 GHRP10912 638 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 CCND2P30279 289 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 GBP2P32456 591 aaPredicted RBP11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 DNA2P51530 1060 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 MOGSQ13724 837 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 SEPT14Q6ZU15 432 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 IRF2BP2Q7Z5L9 587 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 ANKRD23Q86SG2 305 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 CENPTQ96BT3 561 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 SEC16BQ96JE7 1060 aa11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 MOV10L1Q9BXT6 1211 aaKnown RBP11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 MAP3K20Q9NYL2 800 aaKnown RBP11.12□□□□□ -0.63
APOBEC3F-201ENST00000308521 A0A0A6YYK5 440 aaPredicted RBP11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 CXCL11O14625 94 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 ATP2A1O14983 1001 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 SART1O43290 800 aaKnown RBP11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 CEP104O60308 925 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 FESP07332 822 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 BCRP11274 1271 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 MAGEA8P43361 318 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 RNASE9P60153 205 aaKnown RBP11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 NAA25Q14CX7 972 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 ANKRD20A8PQ5CZ79 823 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 SLFN11Q7Z7L1 901 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 FAM133AQ8N9E0 248 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 SCFD1Q8WVM8 642 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 LMBR1Q8WVP7 490 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 OSBPL7Q9BZF2 842 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 CNOT10Q9H9A5 744 aaKnown RBP11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 TUFT1Q9NNX1 390 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 RBPJLQ9UBG7 517 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 NENFQ9UMX5 172 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 STXBP5LQ9Y2K9 1186 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 BRCA2P51587 3418 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 CNMDO75829 334 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 NMT1P30419 496 aaKnown RBP11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 PRKCIP41743 596 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 SP2Q02086 613 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 PPIL2Q13356 520 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 EDRF1Q3B7T1 1238 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 DPY19L2P1Q6NXN4 242 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 CRELD2Q6UXH1 353 aaPredicted RBP11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 MFN1Q8IWA4 741 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 RPUSD2Q8IZ73 545 aaKnown RBP11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 CACNA2D3Q8IZS8 1091 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 PROCA1Q8NCQ7 364 aaPredicted RBP11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 CCHCR1Q8TD31 782 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 RAPGEF5Q92565 580 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 NEUROG2Q9H2A3 272 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 KCTD10Q9H3F6 313 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 FAM114A2Q9NRY5 505 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 IRAK4Q9NWZ3 460 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 SUCLA2Q9P2R7 463 aaPredicted RBP11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 TCEAL9Q9UHQ7 104 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 FBXL5Q9UKA1 691 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 INTUQ9ULD6 942 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 AGTPBP1Q9UPW5 1226 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 RPS6KL1Q9Y6S9 549 aa11.11□□□□□ -0.63
APOBEC3F-201ENST00000308521 WDR90Q96KV7 1748 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 NPEPPSP55786 919 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 EIF3BP55884 814 aaKnown RBP11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 XRCC4Q13426 336 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 BYSLQ13895 437 aaKnown RBP11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 ZC2HC1CQ53FD0 456 aaPredicted RBP11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 LDLRAD1Q5T700 205 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 GPAT2Q6NUI2 795 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 C1orf186Q6ZWK4 172 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 NLRX1Q86UT6 975 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 FUKQ8N0W3 1084 aa11.1□□□□□ -0.63
APOBEC3F-201ENST00000308521 MYCT1Q8N699 235 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms