RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 ZBTB41Q5SVQ8 909 aa24.33■■□□□ 1.48
PDLIM2-202ENST00000308354 IER5Q5VY09 327 aa24.33■■□□□ 1.48
PDLIM2-202ENST00000308354 LMBRD2Q68DH5 695 aaPredicted RBP24.33■■□□□ 1.48
PDLIM2-202ENST00000308354 ZNF467Q7Z7K2 595 aaPredicted RBP24.33■■□□□ 1.48
PDLIM2-202ENST00000308354 KAT5Q92993 513 aa24.33■■□□□ 1.48
PDLIM2-202ENST00000308354 PNKPQ96T60 521 aa24.33■■□□□ 1.48
PDLIM2-202ENST00000308354 TINF2Q9BSI4 451 aa24.33■■□□□ 1.48
PDLIM2-202ENST00000308354 ERAP1Q9NZ08 941 aa24.33■■□□□ 1.48
PDLIM2-202ENST00000308354 AGO2Q9UKV8 859 aaKnown RBP24.33■■□□□ 1.48
PDLIM2-202ENST00000308354 JRKLQ9Y4A0 524 aa24.33■■□□□ 1.48
PDLIM2-202ENST00000308354 BUB1O43683 1085 aa24.32■■□□□ 1.48
PDLIM2-202ENST00000308354 PRKCIP41743 596 aa24.32■■□□□ 1.48
PDLIM2-202ENST00000308354 CLCN3P51790 818 aa24.32■■□□□ 1.48
PDLIM2-202ENST00000308354 PSPC1Q8WXF1 523 aaKnown RBP24.32■■□□□ 1.48
PDLIM2-202ENST00000308354 FAM53CQ9NYF3 392 aa24.32■■□□□ 1.48
PDLIM2-202ENST00000308354 BZW2Q9Y6E2 419 aaKnown RBP24.32■■□□□ 1.48
PDLIM2-202ENST00000308354 IGKV6-21A0A0C4DH24 114 aa24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 ZNF233A6NK53 670 aa24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 FOXN3O00409 490 aaPredicted RBP24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 P4HA2O15460 535 aa24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 ABCD1P33897 745 aa24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 SLC26A2P50443 739 aa24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 BMS1Q14692 1282 aaKnown RBP24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 TAF1CQ15572 869 aaPredicted RBP24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 KRT39Q6A163 491 aa24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 SAPCD2Q86UD0 394 aa24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 MSANTD4Q8NCY6 345 aa24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 ALS2CR12Q96Q35 445 aa24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 SUCLA2Q9P2R7 463 aaPredicted RBP24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 CENPFP49454 3210 aa24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 RBM47A0AV96 593 aaKnown RBP24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 EXTL3O43909 919 aa24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 HBP1O60381 514 aa24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 FERP16591 822 aa24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 SMPD1P17405 629 aa24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 PRAMEF19Q5SWL8 479 aa24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 EFCAB12Q6NXP0 572 aa24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 TXLNBQ8N3L3 684 aa24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 TAS1R2Q8TE23 839 aa24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 STYXL1Q9Y6J8 313 aa24.31■■□□□ 1.48
PDLIM2-202ENST00000308354 ADCY6O43306 1168 aa24.3■■□□□ 1.48
PDLIM2-202ENST00000308354 INSRRP14616 1297 aa24.3■■□□□ 1.48
PDLIM2-202ENST00000308354 TUBB4BP68371 445 aa24.3■■□□□ 1.48
PDLIM2-202ENST00000308354 KIAA0753Q2KHM9 967 aa24.3■■□□□ 1.48
PDLIM2-202ENST00000308354 TMC2Q8TDI7 906 aa24.3■■□□□ 1.48
PDLIM2-202ENST00000308354 TCP11Q8WWU5 503 aa24.3■■□□□ 1.48
PDLIM2-202ENST00000308354 NLRP4Q96MN2 994 aa24.3■■□□□ 1.48
PDLIM2-202ENST00000308354 MSTO1Q9BUK6 570 aa24.3■■□□□ 1.48
PDLIM2-202ENST00000308354 TMEM134Q9H6X4 195 aa24.3■■□□□ 1.48
PDLIM2-202ENST00000308354 ACVR2BQ13705 512 aa24.3■■□□□ 1.48
PDLIM2-202ENST00000308354 CRELD2Q6UXH1 353 aaPredicted RBP24.3■■□□□ 1.48
PDLIM2-202ENST00000308354 SV2AQ7L0J3 742 aa24.3■■□□□ 1.48
PDLIM2-202ENST00000308354 KRT222Q8N1A0 295 aa24.3■■□□□ 1.48
PDLIM2-202ENST00000308354 PPTC7Q8NI37 304 aa24.3■■□□□ 1.48
PDLIM2-202ENST00000308354 TMEM8AQ9HCN3 771 aa24.3■■□□□ 1.48
PDLIM2-202ENST00000308354 SNX12Q9UMY4 172 aa24.3■■□□□ 1.48
PDLIM2-202ENST00000308354 PIGRP01833 764 aa24.29■■□□□ 1.48
PDLIM2-202ENST00000308354 NAP1L1P55209 391 aaKnown RBP24.29■■□□□ 1.48
PDLIM2-202ENST00000308354 ZNF516Q92618 1163 aa24.29■■□□□ 1.48
PDLIM2-202ENST00000308354 NOX5Q96PH1 765 aa24.29■■□□□ 1.48
PDLIM2-202ENST00000308354 PDE11AQ9HCR9 933 aa24.29■■□□□ 1.48
PDLIM2-202ENST00000308354 ARFGAP3Q9NP61 516 aa24.29■■□□□ 1.48
PDLIM2-202ENST00000308354 LUC7LQ9NQ29 371 aaKnown RBP24.29■■□□□ 1.48
PDLIM2-202ENST00000308354 NAGPAQ9UK23 515 aa24.29■■□□□ 1.48
PDLIM2-202ENST00000308354 PPME1Q9Y570 386 aa24.29■■□□□ 1.48
PDLIM2-202ENST00000308354 CCDC151A5D8V7 595 aa24.29■■□□□ 1.48
PDLIM2-202ENST00000308354 KLRC1P26715 233 aa24.29■■□□□ 1.48
PDLIM2-202ENST00000308354 MCCD1P59942 119 aaPredicted RBP24.29■■□□□ 1.48
PDLIM2-202ENST00000308354 MXD4Q14582 209 aaPredicted RBP24.29■■□□□ 1.48
PDLIM2-202ENST00000308354 RGMBQ6NW40 437 aa24.29■■□□□ 1.48
PDLIM2-202ENST00000308354 ZBTB33Q86T24 672 aa24.29■■□□□ 1.48
PDLIM2-202ENST00000308354 PPM1KQ8N3J5 372 aa24.29■■□□□ 1.48
PDLIM2-202ENST00000308354 PPP1R16BQ96T49 567 aa24.29■■□□□ 1.48
PDLIM2-202ENST00000308354 SLC15A5A6NIM6 579 aa24.28■■□□□ 1.48
PDLIM2-202ENST00000308354 PDE2AO00408 941 aaPredicted RBP24.28■■□□□ 1.48
PDLIM2-202ENST00000308354 DDX3XO00571 662 aaKnown RBP eCLIP24.28■■□□□ 1.489e-11■■■■■ 33.8
PDLIM2-202ENST00000308354 MSCO60682 206 aa24.28■■□□□ 1.48
PDLIM2-202ENST00000308354 ALKBH5Q6P6C2 394 aaKnown RBP24.28■■□□□ 1.48
PDLIM2-202ENST00000308354 GLYCTKQ8IVS8 523 aa24.28■■□□□ 1.48
PDLIM2-202ENST00000308354 CAGE1Q8TC20 777 aa24.28■■□□□ 1.48
PDLIM2-202ENST00000308354 KCNN1Q92952 543 aa24.28■■□□□ 1.48
PDLIM2-202ENST00000308354 PI4K2AQ9BTU6 479 aa24.28■■□□□ 1.48
PDLIM2-202ENST00000308354 ABHD16BQ9H3Z7 469 aa24.28■■□□□ 1.48
PDLIM2-202ENST00000308354 RAB21Q9UL25 225 aa24.28■■□□□ 1.48
PDLIM2-202ENST00000308354 DOCK3Q8IZD9 2030 aa24.28■■□□□ 1.48
PDLIM2-202ENST00000308354 A0A0B4J269 797 aa24.27■■□□□ 1.48
PDLIM2-202ENST00000308354 MANSC4A6NHS7 340 aaPredicted RBP24.27■■□□□ 1.48
PDLIM2-202ENST00000308354 USP8P40818 1118 aa24.27■■□□□ 1.48
PDLIM2-202ENST00000308354 CKAP4Q07065 602 aaKnown RBP24.27■■□□□ 1.48
PDLIM2-202ENST00000308354 BRD3Q15059 726 aa24.27■■□□□ 1.48
PDLIM2-202ENST00000308354 SLFN12LQ6IEE8 588 aa24.27■■□□□ 1.48
PDLIM2-202ENST00000308354 RNF10Q8N5U6 811 aaKnown RBP24.27■■□□□ 1.48
PDLIM2-202ENST00000308354 C16orf70Q9BSU1 422 aa24.27■■□□□ 1.48
PDLIM2-202ENST00000308354 TCHPQ9BT92 498 aa24.27■■□□□ 1.48
PDLIM2-202ENST00000308354 CCDC113Q9H0I3 377 aa24.27■■□□□ 1.48
PDLIM2-202ENST00000308354 ADGRA2Q96PE1 1338 aa24.27■■□□□ 1.48
PDLIM2-202ENST00000308354 PMM2O15305 246 aa24.27■■□□□ 1.48
PDLIM2-202ENST00000308354 C22orf31O95567 290 aa24.27■■□□□ 1.48
PDLIM2-202ENST00000308354 TBC1D8O95759 1140 aa24.27■■□□□ 1.48
PDLIM2-202ENST00000308354 TNNI1P19237 187 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms