RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 ANKRD23Q86SG2 305 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 SLC30A5Q8TAD4 765 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 L2HGDHQ9H9P8 463 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 SOX13Q9UN79 622 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 FRMPD4Q14CM0 1322 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 SYNDIG1LA6NDD5 238 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 DNAJB1P25685 340 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 CAPZA2P47755 286 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 MCL1Q07820 350 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 NCAPH2Q6IBW4 605 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 NEDD4LQ96PU5 975 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 RIT2Q99578 217 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 RSAD1Q9HA92 442 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 NMT2O60551 498 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 GSNP06396 782 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 IL10P22301 178 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 MAPK4P31152 587 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 COG2Q14746 738 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 PDK2Q15119 407 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 ZNF577Q9BSK1 485 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 MKS1Q9NXB0 559 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 UBP1Q9NZI7 540 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 ZNF609O15014 1411 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 F6X3S4 739 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 CYP2C18P33260 490 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 PIK3CAP42336 1068 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 CHMP6Q96FZ7 201 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 FAM161BQ96MY7 647 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 C7orf25Q9BPX7 421 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 ANLNQ9NQW6 1124 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 NKRFO15226 690 aaKnown RBP eCLIP4.25□□□□□ -1.73
USH2A-201ENST00000307340 CLNS1AP54105 237 aaKnown RBP4.25□□□□□ -1.73
USH2A-201ENST00000307340 CSNK2BP67870 215 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 C11orf88Q6PI97 169 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 TMEM126BQ8IUX1 230 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 POMGNT1Q8WZA1 660 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 MRPL4Q9BYD3 311 aaKnown RBP4.25□□□□□ -1.73
USH2A-201ENST00000307340 F9P00740 461 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 RALBP11234 206 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 E2F4Q16254 413 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 IKBIPQ70UQ0 350 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 DCLRE1BQ9H816 532 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 MTO1Q9Y2Z2 717 aaKnown RBP4.25□□□□□ -1.73
USH2A-201ENST00000307340 CITO14578 2027 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 SH2B2O14492 632 aaPredicted RBP4.25□□□□□ -1.73
USH2A-201ENST00000307340 FKBP6O75344 327 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 CPP00450 1065 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 CLTAP09496 248 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 MXI1P50539 228 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 NDUFA8P51970 172 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 MAPK11Q15759 364 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 TRMT5Q32P41 509 aaKnown RBP4.25□□□□□ -1.73
USH2A-201ENST00000307340 C15orf40Q8WUR7 153 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 ATP6V1G3Q96LB4 118 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 TBCBQ99426 244 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 ARMC7Q9H6L4 198 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 BCL2L12Q9HB09 334 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 GRID1Q9ULK0 1009 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 GYG2O15488 501 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 STX5Q13190 355 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 MAGOHBQ96A72 148 aaKnown RBP4.25□□□□□ -1.73
USH2A-201ENST00000307340 GIMAP4Q9NUV9 329 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 BTBD18B2RXH4 712 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 ICA1Q05084 483 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 ARMCX5Q6P1M9 558 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 NIPA1Q7RTP0 329 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 CHAMP1Q96JM3 812 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 CPSF3Q9UKF6 684 aaKnown RBP4.25□□□□□ -1.73
USH2A-201ENST00000307340 FDFT1P37268 417 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 PCYT1AP49585 367 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 CYLC2Q14093 348 aaPredicted RBP4.25□□□□□ -1.73
USH2A-201ENST00000307340 FAM189A2Q15884 450 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 TIGD7Q6NT04 549 aaPredicted RBP4.25□□□□□ -1.73
USH2A-201ENST00000307340 TYW1BQ6NUM6 668 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 NLRP10Q86W26 655 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 SULF1Q8IWU6 871 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 GEMIN8Q9NWZ8 242 aaKnown RBP4.25□□□□□ -1.73
USH2A-201ENST00000307340 MYH14Q7Z406 1995 aaKnown RBP4.25□□□□□ -1.73
USH2A-201ENST00000307340 IREB2P48200 963 aaKnown RBP4.25□□□□□ -1.73
USH2A-201ENST00000307340 CACNA2D2Q9NY47 1150 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 TAF4O00268 1085 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 ZBED1O96006 694 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 ATICP31939 592 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 PSEN1P49768 467 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 TFDP3Q5H9I0 405 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 REM2Q8IYK8 340 aaPredicted RBP4.25□□□□□ -1.73
USH2A-201ENST00000307340 ULK2Q8IYT8 1036 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 DNAJB8Q8NHS0 232 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 SLC16A10Q8TF71 515 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 GID8Q9NWU2 228 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 ARFGEF2Q9Y6D5 1785 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 TIMM44O43615 452 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 RTN2O75298 545 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 LDOC1O95751 146 aaPredicted RBP4.25□□□□□ -1.73
USH2A-201ENST00000307340 PDE6AP16499 860 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 PPP2R2AP63151 447 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 ANGPT1Q15389 498 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 FSD1LQ9BXM9 530 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 AGXT2Q9BYV1 514 aa4.25□□□□□ -1.73
USH2A-201ENST00000307340 ANKEF1Q9NU02 776 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms