RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 NUP85Q9BW27 656 aa11.4□□□□□ -0.59
SYNPO2-201ENST00000307142 IGFLR1Q9H665 355 aa11.4□□□□□ -0.59
SYNPO2-201ENST00000307142 LRRC4BQ9NT99 713 aa11.4□□□□□ -0.59
SYNPO2-201ENST00000307142 TMX2Q9Y320 296 aa11.4□□□□□ -0.59
SYNPO2-201ENST00000307142 NKRFO15226 690 aaKnown RBP eCLIP11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 HOXA2O43364 376 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 DNAJB2P25686 324 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 RGS7P49802 495 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 ERVK-9P63128 1117 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 ERVK-24P63145 666 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 SP3Q02447 781 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 NCOA4Q13772 614 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 MMEL1Q495T6 779 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 ZNF484Q5JVG2 852 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 KLC3Q6P597 504 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 CCDC170Q8IYT3 715 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 ADAMTS1Q9UHI8 967 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 PCDHB8Q9UN66 801 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 DAAM1Q9Y4D1 1078 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 KRT3P12035 628 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 GPC5P78333 572 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 JADE1Q6IE81 842 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 RHOT2Q8IXI1 618 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 PBXIP1Q96AQ6 731 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 KLC2Q9H0B6 622 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 JRKLQ9Y4A0 524 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 PITPNM2Q9BZ72 1349 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 TBX3O15119 743 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 ASMTLO95671 621 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 PTGISQ16647 500 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 CYP4A22Q5TCH4 519 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 ALKBH5Q6P6C2 394 aaKnown RBP11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 ENOSF1Q7L5Y1 443 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 CYP26B1Q9NR63 512 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 ADGRB1O14514 1584 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 NVLO15381 856 aaKnown RBP11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 RWDD2BP57060 319 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 ANO4Q32M45 955 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 TDRD10Q5VZ19 366 aaKnown RBP11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 SLC35F6Q8N357 371 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 PBKQ96KB5 322 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 PGRMC1O00264 195 aaKnown RBP11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 KIAA0391O15091 583 aaKnown RBP11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 PCSK1P29120 753 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 DSG3P32926 999 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 SH2D4BQ5SQS7 431 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 GMCL1P1Q8NEA9 526 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 ACRBPQ8NEB7 543 aa11.39□□□□□ -0.59
SYNPO2-201ENST00000307142 E5RI56 91 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 URODP06132 367 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 EXOSC10Q01780 885 aaKnown RBP11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 GLRA4Q5JXX5 417 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 PCGF5Q86SE9 256 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 VSIG1Q86XK7 387 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 HPS3Q969F9 1004 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 IGSF9BQ9UPX0 1349 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 RRP9O43818 475 aaKnown RBP11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 AMHR2Q16671 573 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 RMDN1Q96DB5 314 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 MRFAP1L1Q96HT8 127 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 RIT2Q99578 217 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 IP6K2Q9UHH9 426 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 REREQ9P2R6 1566 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 H3BRJ5 948 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 NOGQ13253 232 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 CCDC157Q569K6 752 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 RGMBQ6NW40 437 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 SPATA17Q96L03 361 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 PLEKHA5Q9HAU0 1116 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 NEURL4Q96JN8 1562 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 ADCY3O60266 1144 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 CDC25BP30305 580 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 DACT2Q5SW24 774 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 SENP7Q9BQF6 1050 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 HEMGNQ9BXL5 484 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 LCMT1Q9UIC8 334 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 STRNO43815 780 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 AMHP03971 560 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 AKR1A1P14550 325 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 KPNA2P52292 529 aaKnown RBP11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 IL31Q6EBC2 164 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 SPOPLQ6IQ16 392 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 NOL3O60936 208 aaKnown RBP11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 HARS2P49590 506 aaKnown RBP11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 SNRNP35Q16560 246 aaKnown RBP11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 SH3KBP1Q96B97 665 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 RBM41Q96IZ5 413 aaKnown RBP11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 P2RX7Q99572 595 aaKnown RBP11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 EHD4Q9H223 541 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 CNTNAP5Q8WYK1 1306 aa11.38□□□□□ -0.59
SYNPO2-201ENST00000307142 DNAJC6O75061 913 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 SGSM1Q2NKQ1 1148 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 TLK2Q86UE8 772 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 HASPINQ8TF76 798 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 KIFC3Q9BVG8 833 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 GOLPH3LQ9H4A5 285 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 RGPD8O14715 1765 aaPredicted RBP11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 GNL1P36915 607 aaPredicted RBP11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 TPI1P60174 286 aa11.37□□□□□ -0.59
SYNPO2-201ENST00000307142 KCNB1Q14721 858 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms