RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 VPS36Q86VN1 386 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 SPATA4Q8NEY3 305 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 TPCN2Q8NHX9 752 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 CAGE1Q8TC20 777 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 HNRNPLLQ8WVV9 542 aaKnown RBP7.08□□□□□ -1.28
USP47-201ENST00000305481 PRPF31Q8WWY3 499 aaKnown RBP7.08□□□□□ -1.28
USP47-201ENST00000305481 PSPC1Q8WXF1 523 aaKnown RBP7.08□□□□□ -1.28
USP47-201ENST00000305481 RPGRIP1Q96KN7 1286 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 AGPAT1Q99943 283 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 ZNF408Q9H9D4 720 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 RNF216Q9NWF9 866 aaPredicted RBP7.08□□□□□ -1.28
USP47-201ENST00000305481 INTUQ9ULD6 942 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 A0A0A6YYK5 440 aaPredicted RBP7.08□□□□□ -1.28
USP47-201ENST00000305481 IQCA1LA6NCM1 817 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 H0YCG3 227 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 K7ERI5 159 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 EXTL3O43909 919 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 SGPL1O95470 568 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 CHRNB2P17787 502 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 GTF2H1P32780 548 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 PLA2G4AP47712 749 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 ACOT2P49753 483 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 MKRN3Q13064 507 aaKnown RBP7.08□□□□□ -1.28
USP47-201ENST00000305481 LONRF2Q1L5Z9 754 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 WDR93Q6P2C0 686 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 SLFN11Q7Z7L1 901 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 FBXL13Q8NEE6 735 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 SHCBP1Q8NEM2 672 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 SHC3Q92529 594 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 TATDN2Q93075 761 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 PCDHB18PQ96TA0 734 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 TARS2Q9BW92 718 aaKnown RBP7.08□□□□□ -1.28
USP47-201ENST00000305481 SUGCTQ9HAC7 445 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 ABCB6Q9NP58 842 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 ARFGAP3Q9NP61 516 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 OSGEPQ9NPF4 335 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 RAB20Q9NX57 234 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 NOCTQ9UK39 431 aaKnown RBP7.08□□□□□ -1.28
USP47-201ENST00000305481 ADGRA2Q96PE1 1338 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 ZNF233A6NK53 670 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 BTBD19C9JJ37 291 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 PDHXO00330 501 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 DNA2P51530 1060 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 ITIH3Q06033 890 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 STRN3Q13033 797 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 LMBRD2Q68DH5 695 aaPredicted RBP7.08□□□□□ -1.28
USP47-201ENST00000305481 SCARA3Q6AZY7 606 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 KCNV1Q6PIU1 500 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 MAMDC4Q6UXC1 1216 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 SLC47A2Q86VL8 602 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 PPM1KQ8N3J5 372 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 DEPTORQ8TB45 409 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 HDAC7Q8WUI4 952 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 BRI3BPQ8WY22 251 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 GLG1Q92896 1179 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 ARHGEF26Q96DR7 871 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 ZBTB10Q96DT7 871 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 SPATA33Q96N06 139 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 PI4K2AQ9BTU6 479 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 TSKSQ9UJT2 592 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 AGO2Q9UKV8 859 aaKnown RBP7.08□□□□□ -1.28
USP47-201ENST00000305481 CLEC11AQ9Y240 323 aa7.08□□□□□ -1.28
USP47-201ENST00000305481 A0A0B4J269 797 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 IGKV6-21A0A0C4DH24 114 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 CYP26A1O43174 497 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 ADCY3O60266 1144 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 CCDC172P0C7W6 258 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 TNFAIP3P21580 790 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 ABCD1P33897 745 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 NOP2P46087 812 aaKnown RBP7.07□□□□□ -1.28
USP47-201ENST00000305481 ENPEPQ07075 957 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 PSMD6Q15008 389 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 PLCB4Q15147 1175 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 PTPROQ16827 1216 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 ZNF792Q3KQV3 632 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 GJC2Q5T442 439 aaPredicted RBP7.07□□□□□ -1.28
USP47-201ENST00000305481 PLPPR4Q7Z2D5 763 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 NOP9Q86U38 636 aaKnown RBP7.07□□□□□ -1.28
USP47-201ENST00000305481 LRRC71Q8N4P6 559 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 MMGT1Q8N4V1 131 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 GPRC5AQ8NFJ5 357 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 SLC35G2Q8TBE7 412 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 EPS8L1Q8TE68 723 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 TRAPPC12Q8WVT3 735 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 DHX38Q92620 1227 aaKnown RBP7.07□□□□□ -1.28
USP47-201ENST00000305481 CCDC113Q9H0I3 377 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 THAP2Q9H0W7 228 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 AZI2Q9H6S1 392 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 TMEM134Q9H6X4 195 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 PDE11AQ9HCR9 933 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 COG5Q9UP83 839 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 STXBP5LQ9Y2K9 1186 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 NCANO14594 1321 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 FAM189A1O60320 539 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 MSCO60682 206 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 ZMYND10O75800 440 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 TMEM253P0C7T8 217 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 TXNP10599 105 aaKnown RBP7.07□□□□□ -1.28
USP47-201ENST00000305481 ABCB4P21439 1286 aa7.07□□□□□ -1.28
USP47-201ENST00000305481 MRPS25P82663 173 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms