RNA–Protein interactions for RNA: ENST00000303545.3

RNF139-201, Transcript of ring finger protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF139, Length 2,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139-201ENST00000303545 ATP6V0A1Q93050 837 aa20.1■□□□□ 0.81
RNF139-201ENST00000303545 CYP26B1Q9NR63 512 aa20.1■□□□□ 0.81
RNF139-201ENST00000303545 ZNF112Q9UJU3 913 aa20.1■□□□□ 0.81
RNF139-201ENST00000303545 GOLGA8KD6RF30 607 aa20.09■□□□□ 0.81
RNF139-201ENST00000303545 ANKRD65E5RJM6 399 aa20.09■□□□□ 0.81
RNF139-201ENST00000303545 FZD9O00144 591 aa20.09■□□□□ 0.81
RNF139-201ENST00000303545 RFX1P22670 979 aa20.09■□□□□ 0.81
RNF139-201ENST00000303545 WNT7BP56706 349 aa20.09■□□□□ 0.81
RNF139-201ENST00000303545 GPC5P78333 572 aa20.09■□□□□ 0.81
RNF139-201ENST00000303545 MKRN4PQ13434 485 aaPredicted RBP20.09■□□□□ 0.81
RNF139-201ENST00000303545 C2CD6Q53TS8 623 aa20.09■□□□□ 0.81
RNF139-201ENST00000303545 CATSPERGQ6ZRH7 1159 aa20.09■□□□□ 0.81
RNF139-201ENST00000303545 SV2AQ7L0J3 742 aa20.09■□□□□ 0.81
RNF139-201ENST00000303545 HELQQ8TDG4 1101 aa20.09■□□□□ 0.81
RNF139-201ENST00000303545 TIPINQ9BVW5 301 aa20.09■□□□□ 0.81
RNF139-201ENST00000303545 ACAD9Q9H845 621 aa20.09■□□□□ 0.81
RNF139-201ENST00000303545 P4HA2O15460 535 aa20.09■□□□□ 0.81
RNF139-201ENST00000303545 MFAP3P55082 362 aa20.09■□□□□ 0.81
RNF139-201ENST00000303545 FMO1Q01740 532 aa20.09■□□□□ 0.81
RNF139-201ENST00000303545 CYP24A1Q07973 514 aa20.09■□□□□ 0.81
RNF139-201ENST00000303545 KIFAP3Q92845 792 aa20.09■□□□□ 0.81
RNF139-201ENST00000303545 CALR3Q96L12 384 aaKnown RBP20.09■□□□□ 0.81
RNF139-201ENST00000303545 TEX13BQ9BXU2 312 aa20.09■□□□□ 0.81
RNF139-201ENST00000303545 RSPH14Q9UHP6 348 aa20.09■□□□□ 0.81
RNF139-201ENST00000303545 LCMT1Q9UIC8 334 aa20.09■□□□□ 0.81
RNF139-201ENST00000303545 SPDYE16A6NNV3 312 aaPredicted RBP20.08■□□□□ 0.81
RNF139-201ENST00000303545 COMTP21964 271 aa20.08■□□□□ 0.81
RNF139-201ENST00000303545 ACOT2P49753 483 aa20.08■□□□□ 0.81
RNF139-201ENST00000303545 PPFIA1Q13136 1202 aa20.08■□□□□ 0.81
RNF139-201ENST00000303545 WHAMMQ8TF30 809 aa20.08■□□□□ 0.81
RNF139-201ENST00000303545 KLRG1Q96E93 195 aa20.08■□□□□ 0.81
RNF139-201ENST00000303545 RAB20Q9NX57 234 aa20.08■□□□□ 0.81
RNF139-201ENST00000303545 RTN2O75298 545 aa20.08■□□□□ 0.8
RNF139-201ENST00000303545 CYP11B1P15538 503 aa20.08■□□□□ 0.8
RNF139-201ENST00000303545 SEZ6Q53EL9 994 aa20.08■□□□□ 0.8
RNF139-201ENST00000303545 FBXL13Q8NEE6 735 aa20.08■□□□□ 0.8
RNF139-201ENST00000303545 ZBTB45Q96K62 511 aaPredicted RBP20.08■□□□□ 0.8
RNF139-201ENST00000303545 TMEM8AQ9HCN3 771 aa20.08■□□□□ 0.8
RNF139-201ENST00000303545 GINM1Q9NU53 330 aa20.08■□□□□ 0.8
RNF139-201ENST00000303545 ATP8B3O60423 1300 aa20.08■□□□□ 0.8
RNF139-201ENST00000303545 POLR2AP24928 1970 aaKnown RBP20.08■□□□□ 0.8
RNF139-201ENST00000303545 HSD17B3P37058 310 aa20.07■□□□□ 0.8
RNF139-201ENST00000303545 HIRAP54198 1017 aaPredicted RBP20.07■□□□□ 0.8
RNF139-201ENST00000303545 CEP85LQ5SZL2 805 aa20.07■□□□□ 0.8
RNF139-201ENST00000303545 TREML2Q5T2D2 321 aa20.07■□□□□ 0.8
RNF139-201ENST00000303545 SPOPLQ6IQ16 392 aa20.07■□□□□ 0.8
RNF139-201ENST00000303545 ABHD15Q6UXT9 468 aa20.07■□□□□ 0.8
RNF139-201ENST00000303545 EEPD1Q7L9B9 569 aa20.07■□□□□ 0.8
RNF139-201ENST00000303545 NT5C1BQ96P26 610 aa20.07■□□□□ 0.8
RNF139-201ENST00000303545 ATP6V0A4Q9HBG4 840 aa20.07■□□□□ 0.8
RNF139-201ENST00000303545 MYH9P35579 1960 aaKnown RBP20.07■□□□□ 0.8
RNF139-201ENST00000303545 CCDC188H7C350 402 aa20.07■□□□□ 0.8
RNF139-201ENST00000303545 ATP4AP20648 1035 aa20.07■□□□□ 0.8
RNF139-201ENST00000303545 GNGT1P63211 74 aa20.07■□□□□ 0.8
RNF139-201ENST00000303545 UAP1Q16222 522 aaPredicted RBP20.07■□□□□ 0.8
RNF139-201ENST00000303545 LLGL2Q6P1M3 1020 aa20.07■□□□□ 0.8
RNF139-201ENST00000303545 RHOT2Q8IXI1 618 aa20.07■□□□□ 0.8
RNF139-201ENST00000303545 SAMD3Q8N6K7 520 aa20.07■□□□□ 0.8
RNF139-201ENST00000303545 NLGN2Q8NFZ4 835 aa20.07■□□□□ 0.8
RNF139-201ENST00000303545 UBLCP1Q8WVY7 318 aaPredicted RBP20.07■□□□□ 0.8
RNF139-201ENST00000303545 SHC3Q92529 594 aa20.07■□□□□ 0.8
RNF139-201ENST00000303545 ZNF516Q92618 1163 aa20.07■□□□□ 0.8
RNF139-201ENST00000303545 ZNF653Q96CK0 615 aa20.07■□□□□ 0.8
RNF139-201ENST00000303545 NUP85Q9BW27 656 aa20.07■□□□□ 0.8
RNF139-201ENST00000303545 BRCA1P38398 1863 aaKnown RBP20.07■□□□□ 0.8
RNF139-201ENST00000303545 HARSP12081 509 aaKnown RBP20.06■□□□□ 0.8
RNF139-201ENST00000303545 POLGP54098 1239 aaPredicted RBP20.06■□□□□ 0.8
RNF139-201ENST00000303545 PDCLQ13371 301 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 R3HDM1Q15032 1099 aaKnown RBP20.06■□□□□ 0.8
RNF139-201ENST00000303545 FMNL3Q8IVF7 1028 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 ANKRD35Q8N283 1001 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 GPD1LQ8N335 351 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 CCDC26Q8TAB7 109 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 IFT74Q96LB3 600 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 SENP7Q9BQF6 1050 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 CAPS2Q9BXY5 557 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 ADAMTS5Q9UNA0 930 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 ZNFX1Q9P2E3 1918 aaKnown RBP20.06■□□□□ 0.8
RNF139-201ENST00000303545 TCRBV7S2A1N4TA0A589 114 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 DGAT1O75907 488 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 FDX1P10109 184 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 IRAK1P51617 712 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 ZBTB41Q5SVQ8 909 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 C18orf8Q96DM3 657 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 MFSD14AQ96MC6 490 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 ARID2Q68CP9 1835 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 LRRIQ4A6NIV6 560 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 MAPK13O15264 365 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 LIG4P49917 911 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 PDE6CP51160 858 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 NLRP11P59045 1033 aaKnown RBP20.06■□□□□ 0.8
RNF139-201ENST00000303545 EMC2Q15006 297 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 SCARA3Q6AZY7 606 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 SPIRE2Q8WWL2 714 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 R3HDMLQ9H3Y0 253 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 LRRC4CQ9HCJ2 640 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 PDLIM7Q9NR12 457 aa20.06■□□□□ 0.8
RNF139-201ENST00000303545 SPATA31C2B4DYI2 1134 aa20.05■□□□□ 0.8
RNF139-201ENST00000303545 TNNI1P19237 187 aa20.05■□□□□ 0.8
RNF139-201ENST00000303545 HSPA9P38646 679 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms