RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 ZNF518AQ6AHZ1 1483 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 PPP2R2AP63151 447 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 VEPH1Q14D04 833 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 VSTM4Q8IW00 320 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 FLCNQ8NFG4 579 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 BHMT2Q9H2M3 363 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 GDAQ9Y2T3 454 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 ATP9BO43861 1147 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 GRK2P25098 689 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 PGM1P36871 562 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 HSPA2P54652 639 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 FAM160B2Q86V87 743 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 PGBD3Q8N328 593 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 ATP11CQ8NB49 1132 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 DEPDC7Q96QD5 511 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 PNMA3Q9UL41 463 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 CARMIL3Q8ND23 1372 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 SFI1A8K8P3 1242 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 CYTH3O43739 400 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 TLR2O60603 784 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 CPB1P15086 417 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 HNRNPH2P55795 449 aaKnown RBP10.97□□□□□ -0.65
CLIP1-201ENST00000302528 PARP9Q8IXQ6 854 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 GPT2Q8TD30 523 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 ANKRD49Q8WVL7 239 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 ZCWPW1Q9H0M4 648 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 KLHL31Q9H511 634 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 KIAA1586Q9HCI6 787 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 JAK3P52333 1124 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 SLC16A1P53985 500 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 ALDH18A1P54886 795 aaKnown RBP10.97□□□□□ -0.65
CLIP1-201ENST00000302528 HORMAD1Q86X24 394 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 MTERF3Q96E29 417 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 FAM167AQ96KS9 214 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 GOLPH3LQ9H4A5 285 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 DHX35Q9H5Z1 703 aaKnown RBP10.97□□□□□ -0.65
CLIP1-201ENST00000302528 SERPINB13Q9UIV8 391 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 PALD1Q9ULE6 856 aa10.97□□□□□ -0.65
CLIP1-201ENST00000302528 SAMD9LQ8IVG5 1584 aa10.96□□□□□ -0.65
CLIP1-201ENST00000302528 HOXA13P31271 388 aaPredicted RBP10.96□□□□□ -0.65
CLIP1-201ENST00000302528 LRRC14Q15048 493 aa10.96□□□□□ -0.65
CLIP1-201ENST00000302528 LRRC24Q50LG9 513 aa10.96□□□□□ -0.65
CLIP1-201ENST00000302528 ICE2Q659A1 982 aa10.96□□□□□ -0.65
CLIP1-201ENST00000302528 ASAP3Q8TDY4 903 aa10.96□□□□□ -0.65
CLIP1-201ENST00000302528 FAM162AQ96A26 154 aa10.96□□□□□ -0.65
CLIP1-201ENST00000302528 SLC10A4Q96EP9 437 aa10.96□□□□□ -0.65
CLIP1-201ENST00000302528 CALR3Q96L12 384 aaKnown RBP10.96□□□□□ -0.65
CLIP1-201ENST00000302528 NDEL1Q9GZM8 345 aa10.96□□□□□ -0.65
CLIP1-201ENST00000302528 RAD18Q9NS91 495 aa10.96□□□□□ -0.65
CLIP1-201ENST00000302528 SCN3BQ9NY72 215 aa10.96□□□□□ -0.65
CLIP1-201ENST00000302528 LRRIQ3A6PVS8 624 aaPredicted RBP10.96□□□□□ -0.65
CLIP1-201ENST00000302528 CYBBP04839 570 aa10.96□□□□□ -0.65
CLIP1-201ENST00000302528 RALAP11233 206 aa10.96□□□□□ -0.65
CLIP1-201ENST00000302528 ADORA2BP29275 332 aa10.96□□□□□ -0.65
CLIP1-201ENST00000302528 AKT1P31749 480 aa10.96□□□□□ -0.65
CLIP1-201ENST00000302528 MAPRE1Q15691 268 aaKnown RBP10.96□□□□□ -0.65
CLIP1-201ENST00000302528 BTBD8Q5XKL5 378 aa10.96□□□□□ -0.65
CLIP1-201ENST00000302528 C11orf74Q86VG3 221 aa10.96□□□□□ -0.65
CLIP1-201ENST00000302528 EAF2Q96CJ1 260 aaPredicted RBP10.96□□□□□ -0.65
CLIP1-201ENST00000302528 TMA16Q96EY4 203 aaKnown RBP10.96□□□□□ -0.65
CLIP1-201ENST00000302528 HES6Q96HZ4 224 aa10.96□□□□□ -0.65
CLIP1-201ENST00000302528 TJP2Q9UDY2 1190 aa10.96□□□□□ -0.65
CLIP1-201ENST00000302528 CFAP73A6NFT4 308 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 MYO1CO00159 1063 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 CHL1O00533 1208 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 EIF3DO15371 548 aaKnown RBP eCLIP10.96□□□□□ -0.66
CLIP1-201ENST00000302528 EIF2S1P05198 315 aaKnown RBP10.96□□□□□ -0.66
CLIP1-201ENST00000302528 PHKA1P46020 1223 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 GYS2P54840 703 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 PDAP1Q13442 181 aaKnown RBP10.96□□□□□ -0.66
CLIP1-201ENST00000302528 ADCK5Q3MIX3 580 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 MICU2Q8IYU8 434 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 ST13P5Q8NFI4 369 aaPredicted RBP10.96□□□□□ -0.66
CLIP1-201ENST00000302528 SLC9A2Q9UBY0 812 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 IP6K2Q9UHH9 426 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 ERVK-7P63135 1459 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 KRT16P08779 473 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 ACTR2P61160 394 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 ST8SIA6P61647 398 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 PWP1Q13610 501 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 PID1Q7Z2X4 250 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 P3H2Q8IVL5 708 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 NLGN1Q8N2Q7 840 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 SMAD5Q99717 465 aaKnown RBP10.96□□□□□ -0.66
CLIP1-201ENST00000302528 DDX50Q9BQ39 737 aaKnown RBP10.96□□□□□ -0.66
CLIP1-201ENST00000302528 PLA2R1Q13018 1463 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 MMP1P03956 469 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 EPB42P16452 691 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 KDSRQ06136 332 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 USP39Q53GS9 565 aaKnown RBP10.96□□□□□ -0.66
CLIP1-201ENST00000302528 KDELC2Q7Z4H8 507 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 ZNF564Q8TBZ8 553 aaPredicted RBP10.96□□□□□ -0.66
CLIP1-201ENST00000302528 EME1Q96AY2 570 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 ZFATQ9P243 1243 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 DCDC2Q9UHG0 476 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 LEMD3Q9Y2U8 911 aa10.96□□□□□ -0.66
CLIP1-201ENST00000302528 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.96□□□□□ -0.66
CLIP1-201ENST00000302528 ABCA8O94911 1581 aa10.95□□□□□ -0.66
CLIP1-201ENST00000302528 COPB2P35606 906 aa10.95□□□□□ -0.66
CLIP1-201ENST00000302528 CENPTQ96BT3 561 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms